RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 ATP7AQ04656 1500 aa9.89□□□□□ -0.83
LYSMD3-201ENST00000315948 MAST1Q9Y2H9 1570 aa9.89□□□□□ -0.83
LYSMD3-201ENST00000315948 DUOX2Q9NRD8 1548 aa9.89□□□□□ -0.83
LYSMD3-201ENST00000315948 PLXNC1O60486 1568 aa9.88□□□□□ -0.83
LYSMD3-201ENST00000315948 UGGT1Q9NYU2 1555 aa9.87□□□□□ -0.83
LYSMD3-201ENST00000315948 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
LYSMD3-201ENST00000315948 CCDC144AA2RUR9 1427 aa9.87□□□□□ -0.83
LYSMD3-201ENST00000315948 YEATS2Q9ULM3 1422 aa9.86□□□□□ -0.83
LYSMD3-201ENST00000315948 ERBINQ96RT1 1412 aa9.86□□□□□ -0.83
LYSMD3-201ENST00000315948 KIDINS220Q9ULH0 1771 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 SENP3-EIF4A1A0A087X0R7 540 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 NUTM2DQ5VT03 806 aaPredicted RBP9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 A2MP01023 1474 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 UNC13BO14795 1591 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 CARD11Q9BXL7 1154 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 ACIN1Q9UKV3 1341 aaKnown RBP9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 POGZQ7Z3K3 1410 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 CCDC184Q52MB2 194 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 DHX29Q7Z478 1369 aaKnown RBP9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 ST20-MTHFSA0A0A6YYL1 179 aa9.85□□□□□ -0.83
LYSMD3-201ENST00000315948 ARAP3Q8WWN8 1544 aa9.84□□□□□ -0.83
LYSMD3-201ENST00000315948 KIF7Q2M1P5 1343 aa9.84□□□□□ -0.83
LYSMD3-201ENST00000315948 USP47Q96K76 1375 aa9.84□□□□□ -0.83
LYSMD3-201ENST00000315948 CFAP65Q6ZU64 1925 aaKnown RBP9.84□□□□□ -0.83
LYSMD3-201ENST00000315948 RTEL1-TNFRSF6BF6WH68 1400 aa9.83□□□□□ -0.84
LYSMD3-201ENST00000315948 SPATA31E1Q6ZUB1 1445 aa9.83□□□□□ -0.84
LYSMD3-201ENST00000315948 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
LYSMD3-201ENST00000315948 IQGAP3Q86VI3 1631 aa9.83□□□□□ -0.84
LYSMD3-201ENST00000315948 CHGAP10645 457 aaKnown RBP9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 MLECQ14165 292 aa9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 FRMPD1Q5SYB0 1578 aa9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 MAGI2Q86UL8 1455 aa9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 ATP10AO60312 1499 aa9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 E9PCH4 1651 aa9.82□□□□□ -0.84
LYSMD3-201ENST00000315948 MROH1Q8NDA8 1641 aa9.81□□□□□ -0.84
LYSMD3-201ENST00000315948 ROCK2O75116 1388 aaKnown RBP9.81□□□□□ -0.84
LYSMD3-201ENST00000315948 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 CCDC7Q96M83 1385 aa9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 BCORL1Q5H9F3 1711 aa9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 ABCA6Q8N139 1617 aa9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 WASHC2CQ9Y4E1 1318 aa9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
LYSMD3-201ENST00000315948 PRDM15P57071 1507 aaPredicted RBP9.79□□□□□ -0.84
LYSMD3-201ENST00000315948 PRAG1Q86YV5 1406 aa9.78□□□□□ -0.84
LYSMD3-201ENST00000315948 ANP32CO43423 234 aa9.78□□□□□ -0.84
LYSMD3-201ENST00000315948 FBXO31Q5XUX0 539 aaPredicted RBP9.78□□□□□ -0.84
LYSMD3-201ENST00000315948 DIP2BQ9P265 1576 aa9.78□□□□□ -0.84
LYSMD3-201ENST00000315948 KDM5CP41229 1560 aa9.78□□□□□ -0.84
LYSMD3-201ENST00000315948 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
LYSMD3-201ENST00000315948 CLTCL1P53675 1640 aa9.77□□□□□ -0.85
LYSMD3-201ENST00000315948 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.85
LYSMD3-201ENST00000315948 NPATQ14207 1427 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 KANK1Q14678 1352 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 UHRF1BP1Q6BDS2 1440 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 HECW2Q9P2P5 1572 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 CEP152O94986 1710 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 CFAP70Q5T0N1 1121 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 PLPPR3Q6T4P5 718 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 MLH3Q9UHC1 1453 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 PPRC1Q5VV67 1664 aaKnown RBP9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 DEPDC5O75140 1603 aa9.76□□□□□ -0.85
LYSMD3-201ENST00000315948 RALGAPBQ86X10 1494 aa9.75□□□□□ -0.85
LYSMD3-201ENST00000315948 NEO1Q92859 1461 aa9.75□□□□□ -0.85
LYSMD3-201ENST00000315948 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
LYSMD3-201ENST00000315948 DIP2CQ9Y2E4 1556 aa9.74□□□□□ -0.85
LYSMD3-201ENST00000315948 PTPRTO14522 1441 aa9.74□□□□□ -0.85
LYSMD3-201ENST00000315948 TMEM132EQ6IEE7 984 aa9.73□□□□□ -0.85
LYSMD3-201ENST00000315948 RICTORQ6R327 1708 aa9.73□□□□□ -0.85
LYSMD3-201ENST00000315948 DISP3Q9P2K9 1392 aa9.73□□□□□ -0.85
LYSMD3-201ENST00000315948 SIGLEC1Q9BZZ2 1709 aa9.73□□□□□ -0.85
LYSMD3-201ENST00000315948 CNTLNQ9NXG0 1405 aa9.73□□□□□ -0.85
LYSMD3-201ENST00000315948 TRPM2O94759 1503 aa9.72□□□□□ -0.85
LYSMD3-201ENST00000315948 TESK2Q96S53 571 aa9.72□□□□□ -0.85
LYSMD3-201ENST00000315948 EFCAB6Q5THR3 1501 aa9.72□□□□□ -0.85
LYSMD3-201ENST00000315948 TET3O43151 1660 aa9.72□□□□□ -0.85
LYSMD3-201ENST00000315948 SPHKAPQ2M3C7 1700 aa9.71□□□□□ -0.85
LYSMD3-201ENST00000315948 TRHP20396 242 aaPredicted RBP9.71□□□□□ -0.85
LYSMD3-201ENST00000315948 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.85
LYSMD3-201ENST00000315948 IDI1Q13907 227 aa9.71□□□□□ -0.85
LYSMD3-201ENST00000315948 TRPM1Q7Z4N2 1603 aa9.71□□□□□ -0.86
LYSMD3-201ENST00000315948 FAM9BQ8IZU0 186 aa9.7□□□□□ -0.86
LYSMD3-201ENST00000315948 ABCC3O15438 1527 aa9.7□□□□□ -0.86
LYSMD3-201ENST00000315948 NOS1P29475 1434 aa9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 MROH2AA6NES4 1674 aa9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 KIF13AQ9H1H9 1805 aa9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 GLI2P10070 1586 aa9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 RNF17Q9BXT8 1623 aaKnown RBP9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 SAFB2Q14151 953 aaKnown RBP eCLIP9.69□□□□□ -0.86
LYSMD3-201ENST00000315948 EIF2AK4Q9P2K8 1649 aaKnown RBP9.68□□□□□ -0.86
LYSMD3-201ENST00000315948 TRAK1Q9UPV9 953 aa9.68□□□□□ -0.86
LYSMD3-201ENST00000315948 ARID4BQ4LE39 1312 aaPredicted RBP9.68□□□□□ -0.86
LYSMD3-201ENST00000315948 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
LYSMD3-201ENST00000315948 MRS2Q9HD23 443 aa9.67□□□□□ -0.86
LYSMD3-201ENST00000315948 MADDQ8WXG6 1647 aa9.66□□□□□ -0.86
LYSMD3-201ENST00000315948 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
LYSMD3-201ENST00000315948 GPRASP1Q5JY77 1395 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms