RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 COG3Q96JB2 828 aa17.52■□□□□ 0.4
NPC1-201ENST00000269228 TROQ12816 1431 aaPredicted RBP17.52■□□□□ 0.39
NPC1-201ENST00000269228 KIAA0586Q9BVV6 1533 aa17.52■□□□□ 0.39
NPC1-201ENST00000269228 GOLGA2Q08379 1002 aa17.51■□□□□ 0.39
NPC1-201ENST00000269228 CGNL1Q0VF96 1302 aa17.51■□□□□ 0.39
NPC1-201ENST00000269228 APBB1O00213 710 aa17.51■□□□□ 0.39
NPC1-201ENST00000269228 MYBBP1AQ9BQG0 1328 aaKnown RBP17.51■□□□□ 0.39
NPC1-201ENST00000269228 RRP7AQ9Y3A4 280 aaKnown RBP17.5■□□□□ 0.39
NPC1-201ENST00000269228 ITPRIPQ8IWB1 547 aa17.49■□□□□ 0.39
NPC1-201ENST00000269228 STK31Q9BXU1 1019 aa17.49■□□□□ 0.39
NPC1-201ENST00000269228 SCAPERQ9BY12 1400 aa17.49■□□□□ 0.39
NPC1-201ENST00000269228 KCNJ4P48050 445 aa17.48■□□□□ 0.39
NPC1-201ENST00000269228 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
NPC1-201ENST00000269228 CENPJQ9HC77 1338 aaPredicted RBP17.48■□□□□ 0.39
NPC1-201ENST00000269228 EHBP1L1Q8N3D4 1523 aa17.48■□□□□ 0.39
NPC1-201ENST00000269228 RAPGEF3O95398 923 aa17.48■□□□□ 0.39
NPC1-201ENST00000269228 SMC4Q9NTJ3 1288 aa17.47■□□□□ 0.39
NPC1-201ENST00000269228 PRKRIP1Q9H875 184 aaPredicted RBP17.47■□□□□ 0.39
NPC1-201ENST00000269228 NCLP19338 710 aaKnown RBP17.47■□□□□ 0.39
NPC1-201ENST00000269228 ANP32EQ9BTT0 268 aa17.46■□□□□ 0.39
NPC1-201ENST00000269228 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
NPC1-201ENST00000269228 HECW1Q76N89 1606 aa17.46■□□□□ 0.38
NPC1-201ENST00000269228 STAC3Q96MF2 364 aa17.45■□□□□ 0.38
NPC1-201ENST00000269228 LMOD3Q0VAK6 560 aa17.45■□□□□ 0.38
NPC1-201ENST00000269228 TAOK2Q9UL54 1235 aa17.45■□□□□ 0.38
NPC1-201ENST00000269228 UNC13AQ9UPW8 1703 aa17.44■□□□□ 0.38
NPC1-201ENST00000269228 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
NPC1-201ENST00000269228 GOLGA6L22H0YM25 854 aa17.44■□□□□ 0.38
NPC1-201ENST00000269228 FGD1P98174 961 aa17.44■□□□□ 0.38
NPC1-201ENST00000269228 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
NPC1-201ENST00000269228 CHMP4AQ9BY43 222 aa17.43■□□□□ 0.38
NPC1-201ENST00000269228 MIA2Q96PC5 1412 aa17.43■□□□□ 0.38
NPC1-201ENST00000269228 TPRNQ4KMQ1 711 aa17.43■□□□□ 0.38
NPC1-201ENST00000269228 CDK13Q14004 1512 aaKnown RBP17.43■□□□□ 0.38
NPC1-201ENST00000269228 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
NPC1-201ENST00000269228 IQGAP2Q13576 1575 aa17.42■□□□□ 0.38
NPC1-201ENST00000269228 PSME1Q06323 249 aa17.42■□□□□ 0.38
NPC1-201ENST00000269228 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
NPC1-201ENST00000269228 CFAP70Q5T0N1 1121 aa17.42■□□□□ 0.38
NPC1-201ENST00000269228 TIAM1Q13009 1591 aa17.41■□□□□ 0.38
NPC1-201ENST00000269228 SLC4A10Q6U841 1118 aa17.4■□□□□ 0.38
NPC1-201ENST00000269228 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
NPC1-201ENST00000269228 PDE3BQ13370 1112 aa17.4■□□□□ 0.38
NPC1-201ENST00000269228 EPRSP07814 1512 aaKnown RBP17.39■□□□□ 0.37
NPC1-201ENST00000269228 NAP1L2Q9ULW6 460 aaPredicted RBP17.39■□□□□ 0.37
NPC1-201ENST00000269228 RWDD1Q9H446 243 aaPredicted RBP17.39■□□□□ 0.37
NPC1-201ENST00000269228 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
NPC1-201ENST00000269228 GRIN2AQ12879 1464 aa17.38■□□□□ 0.37
NPC1-201ENST00000269228 TXNDC2Q86VQ3 553 aa17.38■□□□□ 0.37
NPC1-201ENST00000269228 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
NPC1-201ENST00000269228 EVA1CP58658 441 aa17.38■□□□□ 0.37
NPC1-201ENST00000269228 ZNF608Q9ULD9 1512 aaPredicted RBP17.38■□□□□ 0.37
NPC1-201ENST00000269228 KIF7Q2M1P5 1343 aa17.37■□□□□ 0.37
NPC1-201ENST00000269228 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
NPC1-201ENST00000269228 HSP90AB1P08238 724 aaKnown RBP17.36■□□□□ 0.37
NPC1-201ENST00000269228 PLB1Q6P1J6 1458 aa17.36■□□□□ 0.37
NPC1-201ENST00000269228 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
NPC1-201ENST00000269228 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
NPC1-201ENST00000269228 ATF3P18847 181 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 C1orf141Q5JVX7 400 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 APAF1O14727 1248 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 CUL7Q14999 1698 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 AEBP2Q6ZN18 517 aaPredicted RBP17.34■□□□□ 0.37
NPC1-201ENST00000269228 DAPK1P53355 1430 aa17.34■□□□□ 0.37
NPC1-201ENST00000269228 GGNBP2Q9H3C7 697 aa17.33■□□□□ 0.37
NPC1-201ENST00000269228 ARHGEF11O15085 1522 aa17.33■□□□□ 0.36
NPC1-201ENST00000269228 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
NPC1-201ENST00000269228 BCL2L13Q9BXK5 485 aa17.33■□□□□ 0.36
NPC1-201ENST00000269228 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
NPC1-201ENST00000269228 HFM1A2PYH4 1435 aa17.32■□□□□ 0.36
NPC1-201ENST00000269228 TEFQ10587 303 aa17.32■□□□□ 0.36
NPC1-201ENST00000269228 KIAA1107Q9UPP5 1409 aa17.31■□□□□ 0.36
NPC1-201ENST00000269228 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
NPC1-201ENST00000269228 ERICH6BQ5W0A0 696 aa17.31■□□□□ 0.36
NPC1-201ENST00000269228 ZRSR1Q15695 479 aaKnown RBP17.31■□□□□ 0.36
NPC1-201ENST00000269228 MCCP23508 829 aa17.3■□□□□ 0.36
NPC1-201ENST00000269228 PMFBP1Q8TBY8 1022 aa17.3■□□□□ 0.36
NPC1-201ENST00000269228 TAF7LQ5H9L4 462 aa17.29■□□□□ 0.36
NPC1-201ENST00000269228 HDAC5Q9UQL6 1122 aa17.29■□□□□ 0.36
NPC1-201ENST00000269228 HMMRO75330 724 aa17.29■□□□□ 0.36
NPC1-201ENST00000269228 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
NPC1-201ENST00000269228 SLC52A1Q9NWF4 448 aa17.28■□□□□ 0.36
NPC1-201ENST00000269228 PCF11O94913 1555 aaKnown RBP17.28■□□□□ 0.36
NPC1-201ENST00000269228 PRAM1Q96QH2 718 aa17.28■□□□□ 0.36
NPC1-201ENST00000269228 GORABQ5T7V8 394 aa17.28■□□□□ 0.36
NPC1-201ENST00000269228 HSCBQ8IWL3 235 aa17.28■□□□□ 0.36
NPC1-201ENST00000269228 E9PSI1 815 aa17.27■□□□□ 0.36
NPC1-201ENST00000269228 GLIPR1L2Q4G1C9 344 aa17.27■□□□□ 0.36
NPC1-201ENST00000269228 KIAA1211Q6ZU35 1233 aa17.27■□□□□ 0.36
NPC1-201ENST00000269228 CD109Q6YHK3 1445 aa17.27■□□□□ 0.36
NPC1-201ENST00000269228 NLRP6P59044 892 aa17.26■□□□□ 0.35
NPC1-201ENST00000269228 RIPK4P57078 832 aa17.26■□□□□ 0.35
NPC1-201ENST00000269228 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
NPC1-201ENST00000269228 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
NPC1-201ENST00000269228 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
NPC1-201ENST00000269228 NBPF8Q3BBV2 869 aa17.25■□□□□ 0.35
NPC1-201ENST00000269228 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
NPC1-201ENST00000269228 HMOX1P09601 288 aa17.24■□□□□ 0.35
NPC1-201ENST00000269228 WASHC2AQ641Q2 1341 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms