RNA–Protein interactions for RNA: ENST00000269080.6

ABCA8-201, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best) BASIC

Gene ABCA8, Length 5,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-201ENST00000269080 RUFY1Q96T51 708 aa12.97□□□□□ -0.33
ABCA8-201ENST00000269080 CWC15Q9P013 229 aaKnown RBP12.97□□□□□ -0.33
ABCA8-201ENST00000269080 TDRD9Q8NDG6 1382 aaKnown RBP12.96□□□□□ -0.33
ABCA8-201ENST00000269080 CCDC66A2RUB6 948 aa12.96□□□□□ -0.34
ABCA8-201ENST00000269080 RSPH4AQ5TD94 716 aa12.96□□□□□ -0.34
ABCA8-201ENST00000269080 AK7Q96M32 723 aa12.95□□□□□ -0.34
ABCA8-201ENST00000269080 NOL8Q76FK4 1167 aaKnown RBP12.95□□□□□ -0.34
ABCA8-201ENST00000269080 CDR1P51861 262 aa12.95□□□□□ -0.34
ABCA8-201ENST00000269080 FOXD4L5Q5VV16 416 aaPredicted RBP12.95□□□□□ -0.34
ABCA8-201ENST00000269080 FOXD4L4Q8WXT5 416 aaPredicted RBP12.95□□□□□ -0.34
ABCA8-201ENST00000269080 STK26Q9P289 416 aa12.95□□□□□ -0.34
ABCA8-201ENST00000269080 CADPSQ9ULU8 1353 aa12.95□□□□□ -0.34
ABCA8-201ENST00000269080 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
ABCA8-201ENST00000269080 TPD52L1Q16890 204 aaPredicted RBP12.94□□□□□ -0.34
ABCA8-201ENST00000269080 DCAF11Q8TEB1 546 aa12.94□□□□□ -0.34
ABCA8-201ENST00000269080 WASHC2CQ9Y4E1 1318 aa12.93□□□□□ -0.34
ABCA8-201ENST00000269080 FMN1Q68DA7 1419 aa12.93□□□□□ -0.34
ABCA8-201ENST00000269080 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
ABCA8-201ENST00000269080 SAFB2Q14151 953 aaKnown RBP eCLIP12.93□□□□□ -0.34
ABCA8-201ENST00000269080 HSP90B2PQ58FF3 399 aa12.93□□□□□ -0.34
ABCA8-201ENST00000269080 SPAG9O60271 1321 aaKnown RBP12.92□□□□□ -0.34
ABCA8-201ENST00000269080 DCAF8L1A6NGE4 600 aa12.92□□□□□ -0.34
ABCA8-201ENST00000269080 GOLGA6L19H0YKK7 550 aa12.92□□□□□ -0.34
ABCA8-201ENST00000269080 DCTN1Q14203 1278 aa12.92□□□□□ -0.34
ABCA8-201ENST00000269080 KIF3BO15066 747 aa12.92□□□□□ -0.34
ABCA8-201ENST00000269080 HOMER1Q86YM7 354 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 DYDC1Q8WWB3 177 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.91□□□□□ -0.34
ABCA8-201ENST00000269080 DHX37Q8IY37 1157 aaKnown RBP12.91□□□□□ -0.34
ABCA8-201ENST00000269080 TSPYL1Q9H0U9 437 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 TPM1P09493 284 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 ACBD3Q9H3P7 528 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 ARGLU1Q9NWB6 273 aaPredicted RBP12.91□□□□□ -0.34
ABCA8-201ENST00000269080 KIF3AQ9Y496 699 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 MORC1Q86VD1 984 aa12.91□□□□□ -0.34
ABCA8-201ENST00000269080 ABCC8Q09428 1581 aa12.9□□□□□ -0.34
ABCA8-201ENST00000269080 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
ABCA8-201ENST00000269080 BECN2A8MW95 431 aa12.9□□□□□ -0.34
ABCA8-201ENST00000269080 DDX11L8A8MPP1 907 aa12.9□□□□□ -0.34
ABCA8-201ENST00000269080 JPH4Q96JJ6 628 aa12.89□□□□□ -0.35
ABCA8-201ENST00000269080 SF3A1Q15459 793 aaKnown RBP12.89□□□□□ -0.35
ABCA8-201ENST00000269080 G3V3G9 751 aa12.88□□□□□ -0.35
ABCA8-201ENST00000269080 DCAF8Q5TAQ9 597 aa12.88□□□□□ -0.35
ABCA8-201ENST00000269080 ARHGAP35Q9NRY4 1499 aa12.88□□□□□ -0.35
ABCA8-201ENST00000269080 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
ABCA8-201ENST00000269080 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
ABCA8-201ENST00000269080 EIF3AQ14152 1382 aaKnown RBP12.88□□□□□ -0.35
ABCA8-201ENST00000269080 DDX49Q9Y6V7 483 aaKnown RBP12.88□□□□□ -0.35
ABCA8-201ENST00000269080 MNS1Q8NEH6 495 aa12.87□□□□□ -0.35
ABCA8-201ENST00000269080 RCAN3Q9UKA8 241 aa12.87□□□□□ -0.35
ABCA8-201ENST00000269080 IPO7O95373 1038 aaKnown RBP12.86□□□□□ -0.35
ABCA8-201ENST00000269080 AEBP1Q8IUX7 1158 aa12.86□□□□□ -0.35
ABCA8-201ENST00000269080 KRI1Q8N9T8 703 aaKnown RBP12.86□□□□□ -0.35
ABCA8-201ENST00000269080 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
ABCA8-201ENST00000269080 TPM2P07951 284 aa12.86□□□□□ -0.35
ABCA8-201ENST00000269080 TAF3Q5VWG9 929 aa12.85□□□□□ -0.35
ABCA8-201ENST00000269080 ZNF330Q9Y3S2 320 aaPredicted RBP12.85□□□□□ -0.35
ABCA8-201ENST00000269080 NEXNQ0ZGT2 675 aa12.85□□□□□ -0.35
ABCA8-201ENST00000269080 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
ABCA8-201ENST00000269080 R3HCC1Q9Y3T6 440 aaKnown RBP12.85□□□□□ -0.35
ABCA8-201ENST00000269080 PDE4AP27815 886 aa12.84□□□□□ -0.35
ABCA8-201ENST00000269080 VPS53Q5VIR6 699 aa12.84□□□□□ -0.35
ABCA8-201ENST00000269080 SKIDA1Q1XH10 827 aa12.84□□□□□ -0.35
ABCA8-201ENST00000269080 FOXD4L6Q3SYB3 417 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-201ENST00000269080 FOXD4L3Q6VB84 417 aaPredicted RBP12.84□□□□□ -0.35
ABCA8-201ENST00000269080 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.84□□□□□ -0.35
ABCA8-201ENST00000269080 TERF2IPQ9NYB0 399 aa12.84□□□□□ -0.35
ABCA8-201ENST00000269080 MARCH6O60337 910 aa12.83□□□□□ -0.36
ABCA8-201ENST00000269080 CC2D1BQ5T0F9 858 aaKnown RBP12.83□□□□□ -0.36
ABCA8-201ENST00000269080 LEKR1Q6ZMV7 388 aa12.83□□□□□ -0.36
ABCA8-201ENST00000269080 PKD2Q13563 968 aa12.83□□□□□ -0.36
ABCA8-201ENST00000269080 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 HDAC5Q9UQL6 1122 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 PTPRGP23470 1445 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 HSPA5P11021 654 aaKnown RBP12.82□□□□□ -0.36
ABCA8-201ENST00000269080 FOXD1Q16676 465 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 MTERF4Q7Z6M4 381 aaKnown RBP12.82□□□□□ -0.36
ABCA8-201ENST00000269080 ZNF526Q8TF50 670 aaPredicted RBP12.82□□□□□ -0.36
ABCA8-201ENST00000269080 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 RBM25P49756 843 aaKnown RBP12.82□□□□□ -0.36
ABCA8-201ENST00000269080 EVA1CP58658 441 aa12.82□□□□□ -0.36
ABCA8-201ENST00000269080 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
ABCA8-201ENST00000269080 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
ABCA8-201ENST00000269080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.81□□□□□ -0.364e-7■■■■■ 57.7
ABCA8-201ENST00000269080 IFT57Q9NWB7 429 aa12.81□□□□□ -0.36
ABCA8-201ENST00000269080 NUP155O75694 1391 aa12.81□□□□□ -0.36
ABCA8-201ENST00000269080 TRIM6-TRIM34B2RNG4 842 aa12.8□□□□□ -0.36
ABCA8-201ENST00000269080 PHF23Q9BUL5 403 aaPredicted RBP12.8□□□□□ -0.36
ABCA8-201ENST00000269080 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
ABCA8-201ENST00000269080 SKOR2Q2VWA4 1001 aaPredicted RBP12.79□□□□□ -0.36
ABCA8-201ENST00000269080 GTF2E1P29083 439 aaPredicted RBP12.79□□□□□ -0.36
ABCA8-201ENST00000269080 NAP1L1P55209 391 aaKnown RBP12.79□□□□□ -0.36
ABCA8-201ENST00000269080 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
ABCA8-201ENST00000269080 BCCIPQ9P287 314 aaKnown RBP eCLIP12.79□□□□□ -0.36
ABCA8-201ENST00000269080 DEF6Q9H4E7 631 aa12.79□□□□□ -0.36
ABCA8-201ENST00000269080 ZRSR2Q15696 482 aaKnown RBP12.78□□□□□ -0.36
ABCA8-201ENST00000269080 INCENPQ9NQS7 918 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 ITPRIPQ8IWB1 547 aa12.78□□□□□ -0.36
ABCA8-201ENST00000269080 H3BQV1 296 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms