RNA–Protein interactions for RNA: ENST00000261908.10

NEO1-201, Transcript of neogenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEO1, Length 7,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEO1-201ENST00000261908 FBXW7Q969H0 707 aa20.24■□□□□ 0.83
NEO1-201ENST00000261908 GOLGA6L19H0YKK7 550 aa20.24■□□□□ 0.83
NEO1-201ENST00000261908 KANK1Q14678 1352 aa20.23■□□□□ 0.83
NEO1-201ENST00000261908 TNIKQ9UKE5 1360 aa20.23■□□□□ 0.83
NEO1-201ENST00000261908 MARCH6O60337 910 aa20.23■□□□□ 0.83
NEO1-201ENST00000261908 DDX11L8A8MPP1 907 aa20.22■□□□□ 0.83
NEO1-201ENST00000261908 LTV1Q96GA3 475 aaPredicted RBP20.22■□□□□ 0.83
NEO1-201ENST00000261908 CEP164Q9UPV0 1460 aa20.22■□□□□ 0.83
NEO1-201ENST00000261908 CENPJQ9HC77 1338 aaPredicted RBP20.22■□□□□ 0.83
NEO1-201ENST00000261908 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
NEO1-201ENST00000261908 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
NEO1-201ENST00000261908 CCDC34Q96HJ3 373 aa20.21■□□□□ 0.83
NEO1-201ENST00000261908 NUTM2FA1L443 756 aa20.21■□□□□ 0.83
NEO1-201ENST00000261908 ELL2O00472 640 aaPredicted RBP20.21■□□□□ 0.83
NEO1-201ENST00000261908 MCTP1Q6DN14 999 aa20.2■□□□□ 0.82
NEO1-201ENST00000261908 SPAG9O60271 1321 aaKnown RBP20.2■□□□□ 0.82
NEO1-201ENST00000261908 WRNQ14191 1432 aaPredicted RBP eCLIP20.2■□□□□ 0.82
NEO1-201ENST00000261908 PDE4AP27815 886 aa20.19■□□□□ 0.82
NEO1-201ENST00000261908 RALBP1Q15311 655 aa20.19■□□□□ 0.82
NEO1-201ENST00000261908 FAM184AQ8NB25 1140 aa20.18■□□□□ 0.82
NEO1-201ENST00000261908 BECN2A8MW95 431 aa20.18■□□□□ 0.82
NEO1-201ENST00000261908 HMMRO75330 724 aa20.18■□□□□ 0.82
NEO1-201ENST00000261908 FRAT2O75474 233 aaPredicted RBP20.18■□□□□ 0.82
NEO1-201ENST00000261908 KIF27Q86VH2 1401 aa20.18■□□□□ 0.82
NEO1-201ENST00000261908 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.17■□□□□ 0.82
NEO1-201ENST00000261908 TSR1Q2NL82 804 aaKnown RBP20.17■□□□□ 0.82
NEO1-201ENST00000261908 G3V3G9 751 aa20.16■□□□□ 0.82
NEO1-201ENST00000261908 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
NEO1-201ENST00000261908 EEA1Q15075 1411 aa20.16■□□□□ 0.82
NEO1-201ENST00000261908 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
NEO1-201ENST00000261908 FOSBP53539 338 aa20.15■□□□□ 0.82
NEO1-201ENST00000261908 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
NEO1-201ENST00000261908 PCMTD1Q96MG8 357 aaPredicted RBP20.14■□□□□ 0.81
NEO1-201ENST00000261908 FAM161AQ3B820 660 aa20.12■□□□□ 0.81
NEO1-201ENST00000261908 KANK4Q5T7N3 995 aaPredicted RBP20.12■□□□□ 0.81
NEO1-201ENST00000261908 MPHOSPH9Q99550 1183 aa20.11■□□□□ 0.81
NEO1-201ENST00000261908 TMX4Q9H1E5 349 aaPredicted RBP20.11■□□□□ 0.81
NEO1-201ENST00000261908 RAD21O60216 631 aa20.1■□□□□ 0.81
NEO1-201ENST00000261908 HOMER1Q86YM7 354 aa20.1■□□□□ 0.81
NEO1-201ENST00000261908 USP35Q9P2H5 1018 aa20.1■□□□□ 0.81
NEO1-201ENST00000261908 NGEFQ8N5V2 710 aa20.1■□□□□ 0.81
NEO1-201ENST00000261908 RAB3GAP2Q9H2M9 1393 aa20.09■□□□□ 0.81
NEO1-201ENST00000261908 HDGFP51858 240 aaKnown RBP20.08■□□□□ 0.8
NEO1-201ENST00000261908 NECTIN2Q92692 538 aa20.08■□□□□ 0.8
NEO1-201ENST00000261908 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.8
NEO1-201ENST00000261908 GPS2Q13227 327 aa20.07■□□□□ 0.8
NEO1-201ENST00000261908 COG6Q9Y2V7 657 aa20.07■□□□□ 0.8
NEO1-201ENST00000261908 CENPQQ7L2Z9 268 aaPredicted RBP20.05■□□□□ 0.8
NEO1-201ENST00000261908 TPM1P09493 284 aa20.05■□□□□ 0.8
NEO1-201ENST00000261908 CCDC70Q6NSX1 233 aa20.05■□□□□ 0.8
NEO1-201ENST00000261908 AMPHP49418 695 aa20.04■□□□□ 0.8
NEO1-201ENST00000261908 AEBP2Q6ZN18 517 aaPredicted RBP20.04■□□□□ 0.8
NEO1-201ENST00000261908 AKAP17AQ02040 695 aaKnown RBP20.04■□□□□ 0.8
NEO1-201ENST00000261908 CALRP27797 417 aaKnown RBP20.03■□□□□ 0.8
NEO1-201ENST00000261908 KLHL34Q8N239 644 aa20.03■□□□□ 0.8
NEO1-201ENST00000261908 KIF3AQ9Y496 699 aa20.03■□□□□ 0.8
NEO1-201ENST00000261908 TPM2P07951 284 aa20.03■□□□□ 0.8
NEO1-201ENST00000261908 SKOR2Q2VWA4 1001 aaPredicted RBP20.03■□□□□ 0.8
NEO1-201ENST00000261908 GTF2E1P29083 439 aaPredicted RBP20.02■□□□□ 0.8
NEO1-201ENST00000261908 NUP155O75694 1391 aa20.02■□□□□ 0.8
NEO1-201ENST00000261908 TEX35Q5T0J7 233 aa20.02■□□□□ 0.79
NEO1-201ENST00000261908 BICD2Q8TD16 824 aa20.01■□□□□ 0.79
NEO1-201ENST00000261908 ANO2Q9NQ90 1003 aa20.01■□□□□ 0.79
NEO1-201ENST00000261908 FHAD1B1AJZ9 1412 aa20.01■□□□□ 0.79
NEO1-201ENST00000261908 RRP1P56182 461 aaKnown RBP20■□□□□ 0.79
NEO1-201ENST00000261908 PHF23Q9BUL5 403 aaPredicted RBP20■□□□□ 0.79
NEO1-201ENST00000261908 KDM4AO75164 1064 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 R3HCC1Q9Y3T6 440 aaKnown RBP19.99■□□□□ 0.79
NEO1-201ENST00000261908 NGDNQ8NEJ9 315 aaKnown RBP19.99■□□□□ 0.79
NEO1-201ENST00000261908 L3MBTL2Q969R5 705 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 SOGA1O94964 1423 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 SKIDA1Q1XH10 827 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 IFT57Q9NWB7 429 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 NLRP13Q86W25 1043 aa19.99■□□□□ 0.79
NEO1-201ENST00000261908 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
NEO1-201ENST00000261908 NAP1L1P55209 391 aaKnown RBP19.97■□□□□ 0.79
NEO1-201ENST00000261908 FAM43AQ8N2R8 423 aa19.97■□□□□ 0.79
NEO1-201ENST00000261908 DIAPH3Q9NSV4 1193 aa19.97■□□□□ 0.79
NEO1-201ENST00000261908 ATP6V1DQ9Y5K8 247 aa19.97■□□□□ 0.79
NEO1-201ENST00000261908 APPP05067 770 aa19.97■□□□□ 0.79
NEO1-201ENST00000261908 VPS37CA5D8V6 355 aaPredicted RBP19.96■□□□□ 0.79
NEO1-201ENST00000261908 PANK3Q9H999 370 aa19.96■□□□□ 0.79
NEO1-201ENST00000261908 EIF2S2P20042 333 aaKnown RBP19.96■□□□□ 0.79
NEO1-201ENST00000261908 MSH5O43196 834 aa19.96■□□□□ 0.79
NEO1-201ENST00000261908 TTLL5Q6EMB2 1281 aa19.96■□□□□ 0.79
NEO1-201ENST00000261908 RRP12Q5JTH9 1297 aaKnown RBP19.96■□□□□ 0.79
NEO1-201ENST00000261908 TERF2IPQ9NYB0 399 aa19.95■□□□□ 0.78
NEO1-201ENST00000261908 SYNE3Q6ZMZ3 975 aa19.94■□□□□ 0.78
NEO1-201ENST00000261908 TRIM29Q14134 588 aa19.93■□□□□ 0.78
NEO1-201ENST00000261908 IPO7O95373 1038 aaKnown RBP19.92■□□□□ 0.78
NEO1-201ENST00000261908 RUFY1Q96T51 708 aa19.92■□□□□ 0.78
NEO1-201ENST00000261908 RNF214Q8ND24 703 aa19.92■□□□□ 0.78
NEO1-201ENST00000261908 EIF3AQ14152 1382 aaKnown RBP19.92■□□□□ 0.78
NEO1-201ENST00000261908 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
NEO1-201ENST00000261908 SASS6Q6UVJ0 657 aa19.92■□□□□ 0.78
NEO1-201ENST00000261908 DHX37Q8IY37 1157 aaKnown RBP19.92■□□□□ 0.78
NEO1-201ENST00000261908 RBM10P98175 930 aaKnown RBP19.91■□□□□ 0.78
NEO1-201ENST00000261908 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
NEO1-201ENST00000261908 TCEAL9Q9UHQ7 104 aa19.91■□□□□ 0.78
NEO1-201ENST00000261908 ZKSCAN2Q63HK3 967 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms