RNA–Protein interactions for RNA: ENST00000253693.6

CAPN7-201, Transcript of calpain 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN7, Length 4,353 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN7-201ENST00000253693 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
CAPN7-201ENST00000253693 ESF1Q9H501 851 aaKnown RBP20.27■□□□□ 0.84
CAPN7-201ENST00000253693 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.84
CAPN7-201ENST00000253693 KDM6BO15054 1643 aa20.26■□□□□ 0.83
CAPN7-201ENST00000253693 PANK3Q9H999 370 aa20.25■□□□□ 0.83
CAPN7-201ENST00000253693 RBM19Q9Y4C8 960 aaKnown RBP20.25■□□□□ 0.83
CAPN7-201ENST00000253693 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
CAPN7-201ENST00000253693 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
CAPN7-201ENST00000253693 EIF3AQ14152 1382 aaKnown RBP20.24■□□□□ 0.83
CAPN7-201ENST00000253693 NBPF1Q3BBV0 1214 aa20.23■□□□□ 0.83
CAPN7-201ENST00000253693 PZPP20742 1482 aa20.23■□□□□ 0.83
CAPN7-201ENST00000253693 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
CAPN7-201ENST00000253693 ADGRL2O95490 1459 aa20.2■□□□□ 0.82
CAPN7-201ENST00000253693 NEFMP07197 916 aa20.19■□□□□ 0.82
CAPN7-201ENST00000253693 RTL5Q5HYW3 569 aaPredicted RBP20.19■□□□□ 0.82
CAPN7-201ENST00000253693 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
CAPN7-201ENST00000253693 NPM2Q86SE8 214 aaKnown RBP20.18■□□□□ 0.82
CAPN7-201ENST00000253693 RCAN3Q9UKA8 241 aa20.16■□□□□ 0.82
CAPN7-201ENST00000253693 PDE3BQ13370 1112 aa20.16■□□□□ 0.82
CAPN7-201ENST00000253693 WASHC2CQ9Y4E1 1318 aa20.15■□□□□ 0.82
CAPN7-201ENST00000253693 ABCA8O94911 1581 aa20.15■□□□□ 0.82
CAPN7-201ENST00000253693 BRD4O60885 1362 aaPredicted RBP20.14■□□□□ 0.81
CAPN7-201ENST00000253693 TEX14Q8IWB6 1497 aa20.14■□□□□ 0.81
CAPN7-201ENST00000253693 CFAP53Q96M91 514 aa20.13■□□□□ 0.81
CAPN7-201ENST00000253693 SYCP2Q9BX26 1530 aa20.13■□□□□ 0.81
CAPN7-201ENST00000253693 ANP32EQ9BTT0 268 aa20.12■□□□□ 0.81
CAPN7-201ENST00000253693 ABCC10Q5T3U5 1492 aa20.12■□□□□ 0.81
CAPN7-201ENST00000253693 SCAPERQ9BY12 1400 aa20.11■□□□□ 0.81
CAPN7-201ENST00000253693 TNNT2P45379 298 aaPredicted RBP20.11■□□□□ 0.81
CAPN7-201ENST00000253693 PNISRQ8TF01 805 aaKnown RBP20.1■□□□□ 0.81
CAPN7-201ENST00000253693 PLCH2O75038 1416 aa20.09■□□□□ 0.81
CAPN7-201ENST00000253693 MORC1Q86VD1 984 aa20.08■□□□□ 0.8
CAPN7-201ENST00000253693 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
CAPN7-201ENST00000253693 POGKQ9P215 609 aa20.07■□□□□ 0.8
CAPN7-201ENST00000253693 FAM135AQ9P2D6 1515 aa20.06■□□□□ 0.8
CAPN7-201ENST00000253693 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
CAPN7-201ENST00000253693 DENND4BO75064 1496 aaPredicted RBP20.06■□□□□ 0.8
CAPN7-201ENST00000253693 RALGAPBQ86X10 1494 aa20.05■□□□□ 0.8
CAPN7-201ENST00000253693 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
CAPN7-201ENST00000253693 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
CAPN7-201ENST00000253693 TRAK1Q9UPV9 953 aa20.05■□□□□ 0.8
CAPN7-201ENST00000253693 SAFB2Q14151 953 aaKnown RBP eCLIP20.03■□□□□ 0.8
CAPN7-201ENST00000253693 NUTM2DQ5VT03 806 aaPredicted RBP20.02■□□□□ 0.8
CAPN7-201ENST00000253693 ERBINQ96RT1 1412 aa20.02■□□□□ 0.8
CAPN7-201ENST00000253693 MBD5Q9P267 1494 aa20.02■□□□□ 0.79
CAPN7-201ENST00000253693 SRPK2P78362 688 aaKnown RBP20■□□□□ 0.79
CAPN7-201ENST00000253693 STK26Q9P289 416 aa20■□□□□ 0.79
CAPN7-201ENST00000253693 CFAP70Q5T0N1 1121 aa20■□□□□ 0.79
CAPN7-201ENST00000253693 DUOX2Q9NRD8 1548 aa19.99■□□□□ 0.79
CAPN7-201ENST00000253693 ARHGEF12Q9NZN5 1544 aa19.99■□□□□ 0.79
CAPN7-201ENST00000253693 TRAPPC8Q9Y2L5 1435 aa19.99■□□□□ 0.79
CAPN7-201ENST00000253693 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
CAPN7-201ENST00000253693 GOLGA2Q08379 1002 aa19.99■□□□□ 0.79
CAPN7-201ENST00000253693 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
CAPN7-201ENST00000253693 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
CAPN7-201ENST00000253693 VGFO15240 615 aaPredicted RBP19.97■□□□□ 0.79
CAPN7-201ENST00000253693 ARHGEF5Q12774 1597 aa19.97■□□□□ 0.79
CAPN7-201ENST00000253693 FANCAO15360 1455 aa19.97■□□□□ 0.79
CAPN7-201ENST00000253693 ADGRL1O94910 1474 aa19.97■□□□□ 0.79
CAPN7-201ENST00000253693 SPATA31E1Q6ZUB1 1445 aa19.97■□□□□ 0.79
CAPN7-201ENST00000253693 UHRF1BP1Q6BDS2 1440 aa19.97■□□□□ 0.79
CAPN7-201ENST00000253693 SMG6Q86US8 1419 aaKnown RBP19.96■□□□□ 0.79
CAPN7-201ENST00000253693 CCDC146Q8IYE0 955 aa19.95■□□□□ 0.78
CAPN7-201ENST00000253693 PRAG1Q86YV5 1406 aa19.95■□□□□ 0.78
CAPN7-201ENST00000253693 MLECQ14165 292 aa19.95■□□□□ 0.78
CAPN7-201ENST00000253693 CENPJQ9HC77 1338 aaPredicted RBP19.94■□□□□ 0.78
CAPN7-201ENST00000253693 CHD1O14646 1710 aa19.94■□□□□ 0.78
CAPN7-201ENST00000253693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.788e-7■■■□□ 16.5
CAPN7-201ENST00000253693 CDC42BPAQ5VT25 1732 aa19.93■□□□□ 0.78
CAPN7-201ENST00000253693 SAMD9LQ8IVG5 1584 aa19.93■□□□□ 0.78
CAPN7-201ENST00000253693 KDM5BQ9UGL1 1544 aa19.92■□□□□ 0.78
CAPN7-201ENST00000253693 PLPPR3Q6T4P5 718 aa19.92■□□□□ 0.78
CAPN7-201ENST00000253693 U2SURPO15042 1029 aaKnown RBP19.9■□□□□ 0.78
CAPN7-201ENST00000253693 EXOC6Q8TAG9 804 aa19.9■□□□□ 0.78
CAPN7-201ENST00000253693 ADAMTS8Q9UP79 889 aa19.9■□□□□ 0.78
CAPN7-201ENST00000253693 MAPK8IP3Q9UPT6 1336 aa19.9■□□□□ 0.78
CAPN7-201ENST00000253693 WDR7Q9Y4E6 1490 aa19.9■□□□□ 0.78
CAPN7-201ENST00000253693 PPP2R1AP30153 589 aa19.9■□□□□ 0.78
CAPN7-201ENST00000253693 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.78
CAPN7-201ENST00000253693 PPM1GO15355 546 aaPredicted RBP19.89■□□□□ 0.77
CAPN7-201ENST00000253693 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.77
CAPN7-201ENST00000253693 RAPGEF3O95398 923 aa19.88■□□□□ 0.77
CAPN7-201ENST00000253693 CD109Q6YHK3 1445 aa19.88■□□□□ 0.77
CAPN7-201ENST00000253693 TCERG1O14776 1098 aaKnown RBP19.88■□□□□ 0.77
CAPN7-201ENST00000253693 NBR1Q14596 966 aa19.88■□□□□ 0.77
CAPN7-201ENST00000253693 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
CAPN7-201ENST00000253693 DISP3Q9P2K9 1392 aa19.87■□□□□ 0.77
CAPN7-201ENST00000253693 PLIN1O60240 522 aa19.87■□□□□ 0.77
CAPN7-201ENST00000253693 TTC37Q6PGP7 1564 aa19.86■□□□□ 0.77
CAPN7-201ENST00000253693 ASXL2Q76L83 1435 aa19.86■□□□□ 0.77
CAPN7-201ENST00000253693 PREX2Q70Z35 1606 aa19.86■□□□□ 0.77
CAPN7-201ENST00000253693 TMEM132EQ6IEE7 984 aa19.86■□□□□ 0.77
CAPN7-201ENST00000253693 CDCA7LQ96GN5 454 aa19.86■□□□□ 0.77
CAPN7-201ENST00000253693 NOP58Q9Y2X3 529 aaKnown RBP19.86■□□□□ 0.77
CAPN7-201ENST00000253693 U2AF1L5P0DN76 240 aaPredicted RBP19.86■□□□□ 0.77
CAPN7-201ENST00000253693 U2AF1Q01081 240 aaKnown RBP eCLIP19.86■□□□□ 0.77
CAPN7-201ENST00000253693 ERCC6L2Q5T890 1561 aa19.85■□□□□ 0.77
CAPN7-201ENST00000253693 APAF1O14727 1248 aa19.85■□□□□ 0.77
CAPN7-201ENST00000253693 HDGFL2Q7Z4V5 671 aaPredicted RBP19.85■□□□□ 0.77
CAPN7-201ENST00000253693 CGNL1Q0VF96 1302 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms