RNA–Protein interactions for RNA: ENST00000252999.7

LAMA5-201, Transcript of laminin subunit alpha 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMA5, Length 11,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA5-201ENST00000252999 RUFY1Q96T51 708 aa14.06□□□□□ -0.16
LAMA5-201ENST00000252999 IPO7O95373 1038 aaKnown RBP14.06□□□□□ -0.16
LAMA5-201ENST00000252999 SLC4A3P48751 1232 aa14.06□□□□□ -0.16
LAMA5-201ENST00000252999 AK7Q96M32 723 aa14.06□□□□□ -0.16
LAMA5-201ENST00000252999 CLUAP1Q96AJ1 413 aa14.06□□□□□ -0.16
LAMA5-201ENST00000252999 FBXW7Q969H0 707 aa14.05□□□□□ -0.16
LAMA5-201ENST00000252999 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
LAMA5-201ENST00000252999 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.05□□□□□ -0.16
LAMA5-201ENST00000252999 STK26Q9P289 416 aa14.05□□□□□ -0.16
LAMA5-201ENST00000252999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
LAMA5-201ENST00000252999 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
LAMA5-201ENST00000252999 KANK1Q14678 1352 aa14.04□□□□□ -0.16
LAMA5-201ENST00000252999 FAM184AQ8NB25 1140 aa14.04□□□□□ -0.16
LAMA5-201ENST00000252999 ATP6V1DQ9Y5K8 247 aa14.03□□□□□ -0.16
LAMA5-201ENST00000252999 SKOR2Q2VWA4 1001 aaPredicted RBP14.02□□□□□ -0.16
LAMA5-201ENST00000252999 CSB-PGBD3P0DP91 1061 aa14.02□□□□□ -0.16
LAMA5-201ENST00000252999 AKAP17AQ02040 695 aaKnown RBP14.02□□□□□ -0.17
LAMA5-201ENST00000252999 CCDC146Q8IYE0 955 aa14.02□□□□□ -0.17
LAMA5-201ENST00000252999 HSPA5P11021 654 aaKnown RBP14.02□□□□□ -0.17
LAMA5-201ENST00000252999 TCEAL9Q9UHQ7 104 aa14.02□□□□□ -0.17
LAMA5-201ENST00000252999 CCDC191Q8NCU4 936 aa14.01□□□□□ -0.17
LAMA5-201ENST00000252999 HDGFL2Q7Z4V5 671 aaPredicted RBP14.01□□□□□ -0.17
LAMA5-201ENST00000252999 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
LAMA5-201ENST00000252999 G3V3G9 751 aa14.01□□□□□ -0.17
LAMA5-201ENST00000252999 DCAF8Q5TAQ9 597 aa14.01□□□□□ -0.17
LAMA5-201ENST00000252999 CENPJQ9HC77 1338 aaPredicted RBP14.01□□□□□ -0.17
LAMA5-201ENST00000252999 RILPL2Q969X0 211 aa14.01□□□□□ -0.17
LAMA5-201ENST00000252999 NAP1L1P55209 391 aaKnown RBP14.01□□□□□ -0.17
LAMA5-201ENST00000252999 FRAT2O75474 233 aaPredicted RBP14□□□□□ -0.17
LAMA5-201ENST00000252999 H0YHG0 523 aa14□□□□□ -0.17
LAMA5-201ENST00000252999 ANKRD20A12PQ8NF67 263 aa14□□□□□ -0.17
LAMA5-201ENST00000252999 IFT57Q9NWB7 429 aa13.99□□□□□ -0.17
LAMA5-201ENST00000252999 PLCD4Q9BRC7 762 aa13.99□□□□□ -0.17
LAMA5-201ENST00000252999 CNKSR2Q8WXI2 1034 aa13.99□□□□□ -0.17
LAMA5-201ENST00000252999 HSP90B2PQ58FF3 399 aa13.98□□□□□ -0.17
LAMA5-201ENST00000252999 FAM43AQ8N2R8 423 aa13.98□□□□□ -0.17
LAMA5-201ENST00000252999 ARGLU1Q9NWB6 273 aaPredicted RBP13.98□□□□□ -0.17
LAMA5-201ENST00000252999 MNS1Q8NEH6 495 aa13.98□□□□□ -0.17
LAMA5-201ENST00000252999 RDXP35241 583 aaKnown RBP13.98□□□□□ -0.17
LAMA5-201ENST00000252999 RALBP1Q15311 655 aa13.97□□□□□ -0.17
LAMA5-201ENST00000252999 ACBD3Q9H3P7 528 aa13.97□□□□□ -0.17
LAMA5-201ENST00000252999 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■■■■ 87.9
LAMA5-201ENST00000252999 CCNB3Q8WWL7 1395 aa13.97□□□□□ -0.17
LAMA5-201ENST00000252999 CWC15Q9P013 229 aaKnown RBP13.97□□□□□ -0.17
LAMA5-201ENST00000252999 CDR1P51861 262 aa13.96□□□□□ -0.17
LAMA5-201ENST00000252999 KRI1Q8N9T8 703 aaKnown RBP13.96□□□□□ -0.17
LAMA5-201ENST00000252999 FOXD1Q16676 465 aa13.95□□□□□ -0.18
LAMA5-201ENST00000252999 HDAC5Q9UQL6 1122 aa13.95□□□□□ -0.18
LAMA5-201ENST00000252999 MLECQ14165 292 aa13.95□□□□□ -0.18
LAMA5-201ENST00000252999 HSP90AB3PQ58FF7 597 aa13.95□□□□□ -0.18
LAMA5-201ENST00000252999 FOSBP53539 338 aa13.94□□□□□ -0.18
LAMA5-201ENST00000252999 BICD2Q8TD16 824 aa13.94□□□□□ -0.18
LAMA5-201ENST00000252999 CT47A1Q5JQC4 288 aaPredicted RBP13.94□□□□□ -0.18
LAMA5-201ENST00000252999 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
LAMA5-201ENST00000252999 EIF4G1Q04637 1599 aaKnown RBP13.94□□□□□ -0.18
LAMA5-201ENST00000252999 CAGE1Q8TC20 777 aa13.94□□□□□ -0.18
LAMA5-201ENST00000252999 FAM161AQ3B820 660 aa13.93□□□□□ -0.18
LAMA5-201ENST00000252999 RAD21O60216 631 aa13.93□□□□□ -0.18
LAMA5-201ENST00000252999 PKNOX2Q96KN3 472 aa13.93□□□□□ -0.18
LAMA5-201ENST00000252999 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
LAMA5-201ENST00000252999 HOOK1Q9UJC3 728 aaKnown RBP13.93□□□□□ -0.18
LAMA5-201ENST00000252999 DIAPH3Q9NSV4 1193 aa13.92□□□□□ -0.18
LAMA5-201ENST00000252999 PDE4AP27815 886 aa13.92□□□□□ -0.18
LAMA5-201ENST00000252999 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
LAMA5-201ENST00000252999 TSPYL1Q9H0U9 437 aa13.92□□□□□ -0.18
LAMA5-201ENST00000252999 TRIM29Q14134 588 aa13.91□□□□□ -0.18
LAMA5-201ENST00000252999 TTLL5Q6EMB2 1281 aa13.91□□□□□ -0.18
LAMA5-201ENST00000252999 SYNE3Q6ZMZ3 975 aa13.91□□□□□ -0.18
LAMA5-201ENST00000252999 EEA1Q15075 1411 aa13.91□□□□□ -0.18
LAMA5-201ENST00000252999 ANO2Q9NQ90 1003 aa13.91□□□□□ -0.18
LAMA5-201ENST00000252999 GTF2E1P29083 439 aaPredicted RBP13.91□□□□□ -0.18
LAMA5-201ENST00000252999 EIF3AQ14152 1382 aaKnown RBP13.9□□□□□ -0.18
LAMA5-201ENST00000252999 ODF2Q5BJF6 829 aa13.9□□□□□ -0.18
LAMA5-201ENST00000252999 RRP7AQ9Y3A4 280 aaKnown RBP13.9□□□□□ -0.18
LAMA5-201ENST00000252999 R3HCC1Q9Y3T6 440 aaKnown RBP13.9□□□□□ -0.18
LAMA5-201ENST00000252999 SKIDA1Q1XH10 827 aa13.9□□□□□ -0.18
LAMA5-201ENST00000252999 CENPQQ7L2Z9 268 aaPredicted RBP13.9□□□□□ -0.19
LAMA5-201ENST00000252999 CEP164Q9UPV0 1460 aa13.89□□□□□ -0.19
LAMA5-201ENST00000252999 CPLX1O14810 134 aa13.89□□□□□ -0.19
LAMA5-201ENST00000252999 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
LAMA5-201ENST00000252999 VPS37CA5D8V6 355 aaPredicted RBP13.88□□□□□ -0.19
LAMA5-201ENST00000252999 PDILTQ8N807 584 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 SETD5Q9C0A6 1442 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC47Q96A33 483 aaKnown RBP13.88□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC66A2RUB6 948 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 HSP90AB2PQ58FF8 381 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
LAMA5-201ENST00000252999 HDGFP51858 240 aaKnown RBP13.88□□□□□ -0.19
LAMA5-201ENST00000252999 CHMP4CQ96CF2 233 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 BCL2L13Q9BXK5 485 aa13.88□□□□□ -0.19
LAMA5-201ENST00000252999 PLIN1O60240 522 aa13.87□□□□□ -0.19
LAMA5-201ENST00000252999 EPS15P42566 896 aa13.87□□□□□ -0.19
LAMA5-201ENST00000252999 SASS6Q6UVJ0 657 aa13.87□□□□□ -0.19
LAMA5-201ENST00000252999 CGNL1Q0VF96 1302 aa13.87□□□□□ -0.19
LAMA5-201ENST00000252999 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
LAMA5-201ENST00000252999 CCDC43Q96MW1 224 aaKnown RBP13.87□□□□□ -0.19
LAMA5-201ENST00000252999 REC8O95072 547 aa13.86□□□□□ -0.19
LAMA5-201ENST00000252999 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
LAMA5-201ENST00000252999 LMOD3Q0VAK6 560 aa13.86□□□□□ -0.19
LAMA5-201ENST00000252999 ZFYVE27Q5T4F4 411 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms