RNA–Protein interactions for RNA: ENST00000220003.13

CSK-201, Transcript of C-terminal Src kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSK, Length 2,767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSK-201ENST00000220003 PPP4R2Q9NY27 417 aa25.27■■□□□ 1.64
CSK-201ENST00000220003 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
CSK-201ENST00000220003 NOP58Q9Y2X3 529 aaKnown RBP25.25■■□□□ 1.63
CSK-201ENST00000220003 FAM135AQ9P2D6 1515 aa25.24■■□□□ 1.63
CSK-201ENST00000220003 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
CSK-201ENST00000220003 B4GALNT3Q6L9W6 998 aa25.23■■□□□ 1.63
CSK-201ENST00000220003 UHRF1BP1LA0JNW5 1464 aa25.22■■□□□ 1.63
CSK-201ENST00000220003 PAK3O75914 559 aaPredicted RBP25.22■■□□□ 1.63
CSK-201ENST00000220003 SPAG9O60271 1321 aaKnown RBP25.22■■□□□ 1.63
CSK-201ENST00000220003 CCDC7Q96M83 1385 aa25.21■■□□□ 1.63
CSK-201ENST00000220003 SENP3-EIF4A1A0A087X0R7 540 aa25.19■■□□□ 1.62
CSK-201ENST00000220003 CARD11Q9BXL7 1154 aa25.19■■□□□ 1.62
CSK-201ENST00000220003 ERICH6BQ5W0A0 696 aa25.18■■□□□ 1.62
CSK-201ENST00000220003 USP47Q96K76 1375 aa25.18■■□□□ 1.62
CSK-201ENST00000220003 ASXL2Q76L83 1435 aa25.18■■□□□ 1.62
CSK-201ENST00000220003 WDR7Q9Y4E6 1490 aa25.17■■□□□ 1.62
CSK-201ENST00000220003 NBPF1Q3BBV0 1214 aa25.16■■□□□ 1.62
CSK-201ENST00000220003 SPATA31E1Q6ZUB1 1445 aa25.15■■□□□ 1.62
CSK-201ENST00000220003 PLA2R1Q13018 1463 aa25.14■■□□□ 1.62
CSK-201ENST00000220003 NPM1P06748 294 aaKnown RBP eCLIP25.13■■□□□ 1.61
CSK-201ENST00000220003 ABCC1P33527 1531 aa25.13■■□□□ 1.61
CSK-201ENST00000220003 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
CSK-201ENST00000220003 SCAPERQ9BY12 1400 aa25.12■■□□□ 1.61
CSK-201ENST00000220003 FANCAO15360 1455 aa25.12■■□□□ 1.61
CSK-201ENST00000220003 CCDC144AA2RUR9 1427 aa25.12■■□□□ 1.61
CSK-201ENST00000220003 SALL2Q9Y467 1007 aaPredicted RBP25.11■■□□□ 1.61
CSK-201ENST00000220003 KIF3BO15066 747 aa25.1■■□□□ 1.61
CSK-201ENST00000220003 KDM5DQ9BY66 1539 aa25.1■■□□□ 1.61
CSK-201ENST00000220003 CNTLNQ9NXG0 1405 aa25.08■■□□□ 1.6
CSK-201ENST00000220003 BCORL1Q5H9F3 1711 aa25.07■■□□□ 1.6
CSK-201ENST00000220003 FAM9BQ8IZU0 186 aa25.07■■□□□ 1.6
CSK-201ENST00000220003 CYB5RLQ6IPT4 315 aa25.06■■□□□ 1.6
CSK-201ENST00000220003 MAST1Q9Y2H9 1570 aa25.05■■□□□ 1.6
CSK-201ENST00000220003 PRKRIP1Q9H875 184 aaPredicted RBP25.04■■□□□ 1.6
CSK-201ENST00000220003 DUOX2Q9NRD8 1548 aa25.04■■□□□ 1.6
CSK-201ENST00000220003 ROCK2O75116 1388 aaKnown RBP25.03■■□□□ 1.6
CSK-201ENST00000220003 ADGRL1O94910 1474 aa25.03■■□□□ 1.6
CSK-201ENST00000220003 RTL5Q5HYW3 569 aaPredicted RBP25.02■■□□□ 1.6
CSK-201ENST00000220003 PLXNC1O60486 1568 aa25.01■■□□□ 1.59
CSK-201ENST00000220003 UNC13BO14795 1591 aa24.99■■□□□ 1.59
CSK-201ENST00000220003 IL27Q8NEV9 243 aa24.99■■□□□ 1.59
CSK-201ENST00000220003 RAPGEF3O95398 923 aa24.99■■□□□ 1.59
CSK-201ENST00000220003 MRS2Q9HD23 443 aa24.99■■□□□ 1.59
CSK-201ENST00000220003 CCDC136Q96JN2 1154 aa24.98■■□□□ 1.59
CSK-201ENST00000220003 SENP3Q9H4L4 574 aaPredicted RBP24.98■■□□□ 1.59
CSK-201ENST00000220003 ZFYVE16Q7Z3T8 1539 aa24.97■■□□□ 1.59
CSK-201ENST00000220003 A2MP01023 1474 aa24.97■■□□□ 1.59
CSK-201ENST00000220003 ERBINQ96RT1 1412 aa24.96■■□□□ 1.59
CSK-201ENST00000220003 RTN4Q9NQC3 1192 aaKnown RBP24.96■■□□□ 1.59
CSK-201ENST00000220003 KDM5CP41229 1560 aa24.96■■□□□ 1.59
CSK-201ENST00000220003 UHRF1BP1Q6BDS2 1440 aa24.95■■□□□ 1.58
CSK-201ENST00000220003 RALGAPBQ86X10 1494 aa24.94■■□□□ 1.58
CSK-201ENST00000220003 ANP32AP39687 249 aaKnown RBP24.94■■□□□ 1.58
CSK-201ENST00000220003 GGT6Q6P531 493 aa24.93■■□□□ 1.58
CSK-201ENST00000220003 IQGAP3Q86VI3 1631 aa24.93■■□□□ 1.58
CSK-201ENST00000220003 IPO9Q96P70 1041 aaKnown RBP24.93■■□□□ 1.58
CSK-201ENST00000220003 ABCA9Q8IUA7 1624 aa24.92■■□□□ 1.58
CSK-201ENST00000220003 CD109Q6YHK3 1445 aa24.91■■□□□ 1.58
CSK-201ENST00000220003 PRAG1Q86YV5 1406 aa24.91■■□□□ 1.58
CSK-201ENST00000220003 ATP7AQ04656 1500 aa24.91■■□□□ 1.58
CSK-201ENST00000220003 ZBTB47Q9UFB7 747 aaPredicted RBP24.89■■□□□ 1.57
CSK-201ENST00000220003 ZBED9Q6R2W3 1325 aa24.87■■□□□ 1.57
CSK-201ENST00000220003 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
CSK-201ENST00000220003 DHX29Q7Z478 1369 aaKnown RBP24.86■■□□□ 1.57
CSK-201ENST00000220003 CHGAP10645 457 aaKnown RBP24.86■■□□□ 1.57
CSK-201ENST00000220003 UGGT1Q9NYU2 1555 aa24.86■■□□□ 1.57
CSK-201ENST00000220003 E9PCH4 1651 aa24.86■■□□□ 1.57
CSK-201ENST00000220003 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
CSK-201ENST00000220003 RTEL1-TNFRSF6BF6WH68 1400 aa24.83■■□□□ 1.57
CSK-201ENST00000220003 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.83■■□□□ 1.57
CSK-201ENST00000220003 ATP10AO60312 1499 aa24.83■■□□□ 1.56
CSK-201ENST00000220003 ARAP3Q8WWN8 1544 aa24.8■■□□□ 1.56
CSK-201ENST00000220003 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
CSK-201ENST00000220003 NUTM2DQ5VT03 806 aaPredicted RBP24.79■■□□□ 1.56
CSK-201ENST00000220003 DISP3Q9P2K9 1392 aa24.78■■□□□ 1.56
CSK-201ENST00000220003 TRPM1Q7Z4N2 1603 aa24.78■■□□□ 1.56
CSK-201ENST00000220003 KIDINS220Q9ULH0 1771 aa24.77■■□□□ 1.56
CSK-201ENST00000220003 KANK1Q14678 1352 aa24.77■■□□□ 1.56
CSK-201ENST00000220003 POLR1AO95602 1720 aaPredicted RBP24.76■■□□□ 1.55
CSK-201ENST00000220003 TESK2Q96S53 571 aa24.75■■□□□ 1.55
CSK-201ENST00000220003 CC2D1BQ5T0F9 858 aaKnown RBP24.74■■□□□ 1.55
CSK-201ENST00000220003 CLTCL1P53675 1640 aa24.73■■□□□ 1.55
CSK-201ENST00000220003 CFAP70Q5T0N1 1121 aa24.72■■□□□ 1.55
CSK-201ENST00000220003 ZNF518AQ6AHZ1 1483 aa24.72■■□□□ 1.55
CSK-201ENST00000220003 ADGRF5Q8IZF2 1346 aa24.71■■□□□ 1.55
CSK-201ENST00000220003 NPM2Q86SE8 214 aaKnown RBP24.7■■□□□ 1.54
CSK-201ENST00000220003 FAM69CQ0P6D2 419 aa24.69■■□□□ 1.54
CSK-201ENST00000220003 LAS1LQ9Y4W2 734 aaKnown RBP24.69■■□□□ 1.54
CSK-201ENST00000220003 MROH1Q8NDA8 1641 aa24.69■■□□□ 1.54
CSK-201ENST00000220003 POGZQ7Z3K3 1410 aa24.68■■□□□ 1.54
CSK-201ENST00000220003 WASHC2CQ9Y4E1 1318 aa24.68■■□□□ 1.54
CSK-201ENST00000220003 PANK3Q9H999 370 aa24.67■■□□□ 1.54
CSK-201ENST00000220003 TMC1Q8TDI8 760 aa24.67■■□□□ 1.54
CSK-201ENST00000220003 SPHKAPQ2M3C7 1700 aa24.67■■□□□ 1.54
CSK-201ENST00000220003 NEFMP07197 916 aa24.66■■□□□ 1.54
CSK-201ENST00000220003 DEPDC5O75140 1603 aa24.65■■□□□ 1.54
CSK-201ENST00000220003 PRDM15P57071 1507 aaPredicted RBP24.65■■□□□ 1.54
CSK-201ENST00000220003 TRPM2O94759 1503 aa24.65■■□□□ 1.54
CSK-201ENST00000220003 PTPRTO14522 1441 aa24.65■■□□□ 1.54
CSK-201ENST00000220003 SMG6Q86US8 1419 aaKnown RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms