RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CC2D1BQ5T0F9 858 aaKnown RBP5.52□□□□□ -1.53
CHD9-201ENST00000219084 TERF2IPQ9NYB0 399 aa5.52□□□□□ -1.53
CHD9-201ENST00000219084 MTERF4Q7Z6M4 381 aaKnown RBP5.52□□□□□ -1.53
CHD9-201ENST00000219084 SYNJ1O43426 1573 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 PKD2Q13563 968 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 KIF16BQ96L93 1317 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 CENPJQ9HC77 1338 aaPredicted RBP5.51□□□□□ -1.53
CHD9-201ENST00000219084 HMGB1P09429 215 aaKnown RBP5.51□□□□□ -1.53
CHD9-201ENST00000219084 RTF1Q92541 710 aaKnown RBP5.51□□□□□ -1.53
CHD9-201ENST00000219084 FAM161AQ3B820 660 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 USP47Q96K76 1375 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 DRC7Q8IY82 874 aa5.51□□□□□ -1.53
CHD9-201ENST00000219084 E9PSI1 815 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 TSHZ2Q9NRE2 1034 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 GAPVD1Q14C86 1478 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 FHOD3Q2V2M9 1422 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 WASHC2AQ641Q2 1341 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 WASHC2CQ9Y4E1 1318 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 DNMBPQ6XZF7 1577 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 CFAP43Q8NDM7 1665 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 BRD4O60885 1362 aaPredicted RBP5.5□□□□□ -1.53
CHD9-201ENST00000219084 AQRO60306 1485 aaKnown RBP eCLIP5.5□□□□□ -1.533e-7■■□□□ 12.1
CHD9-201ENST00000219084 FGD5Q6ZNL6 1462 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 PEG3Q9GZU2 1588 aa5.5□□□□□ -1.53
CHD9-201ENST00000219084 EFCAB2Q5VUJ9 269 aa5.49□□□□□ -1.53
CHD9-201ENST00000219084 GOLGA6L1Q8N7Z2 621 aa5.49□□□□□ -1.53
CHD9-201ENST00000219084 KCNH8Q96L42 1107 aa5.49□□□□□ -1.53
CHD9-201ENST00000219084 U2SURPO15042 1029 aaKnown RBP5.49□□□□□ -1.53
CHD9-201ENST00000219084 PTPN23Q9H3S7 1636 aa5.48□□□□□ -1.53
CHD9-201ENST00000219084 ISY1Q9ULR0 285 aaKnown RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 GNL2Q13823 731 aaKnown RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 LRRFIP1Q32MZ4 808 aaKnown RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 KANK4Q5T7N3 995 aaPredicted RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 NCAPD3P42695 1498 aa5.48□□□□□ -1.53
CHD9-201ENST00000219084 DHX8Q14562 1220 aaKnown RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 GSE1Q14687 1217 aa5.48□□□□□ -1.53
CHD9-201ENST00000219084 RRP1P56182 461 aaKnown RBP5.48□□□□□ -1.53
CHD9-201ENST00000219084 ITPRIPQ8IWB1 547 aa5.48□□□□□ -1.53
CHD9-201ENST00000219084 MAP7D2Q96T17 732 aa5.48□□□□□ -1.53
CHD9-201ENST00000219084 SRPK2P78362 688 aaKnown RBP5.47□□□□□ -1.53
CHD9-201ENST00000219084 KIF14Q15058 1648 aa5.47□□□□□ -1.53
CHD9-201ENST00000219084 WWC1Q8IX03 1113 aa5.47□□□□□ -1.53
CHD9-201ENST00000219084 STK31Q9BXU1 1019 aa5.47□□□□□ -1.53
CHD9-201ENST00000219084 NCOA2Q15596 1464 aa5.47□□□□□ -1.53
CHD9-201ENST00000219084 REC8O95072 547 aa5.47□□□□□ -1.53
CHD9-201ENST00000219084 HFM1A2PYH4 1435 aa5.46□□□□□ -1.53
CHD9-201ENST00000219084 C14orf37Q86TY3 774 aa5.46□□□□□ -1.53
CHD9-201ENST00000219084 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.46□□□□□ -1.53
CHD9-201ENST00000219084 EIF2AK4Q9P2K8 1649 aaKnown RBP5.46□□□□□ -1.54
CHD9-201ENST00000219084 GPS2Q13227 327 aa5.46□□□□□ -1.54
CHD9-201ENST00000219084 PRKRIP1Q9H875 184 aaPredicted RBP5.46□□□□□ -1.54
CHD9-201ENST00000219084 TPM3P06753 285 aa5.46□□□□□ -1.54
CHD9-201ENST00000219084 SMC4Q9NTJ3 1288 aa5.46□□□□□ -1.54
CHD9-201ENST00000219084 HSP90AA2PQ14568 343 aaPredicted RBP5.46□□□□□ -1.54
CHD9-201ENST00000219084 NEUROD2Q15784 382 aa5.46□□□□□ -1.54
CHD9-201ENST00000219084 DDX19BQ9UMR2 479 aa5.46□□□□□ -1.54
CHD9-201ENST00000219084 LAMC3Q9Y6N6 1575 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 CCDC141Q6ZP82 1450 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 CCDC7Q96M83 1385 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 EVC2Q86UK5 1308 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 L3MBTL2Q969R5 705 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 CFTRP13569 1480 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 ADGBQ8N7X0 1667 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 PLCB2Q00722 1185 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 FBXO3Q9UK99 471 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 IQGAP2Q13576 1575 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 SETQ01105 290 aaPredicted RBP5.45□□□□□ -1.54
CHD9-201ENST00000219084 IL27Q8NEV9 243 aa5.45□□□□□ -1.54
CHD9-201ENST00000219084 CT47B1P0C2W7 299 aaPredicted RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 ARAP1Q96P48 1450 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 PDIA4P13667 645 aaKnown RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 CCDC70Q6NSX1 233 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 U2AF1L5P0DN76 240 aaPredicted RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 U2AF1Q01081 240 aaKnown RBP eCLIP5.44□□□□□ -1.54
CHD9-201ENST00000219084 LETM1O95202 739 aaPredicted RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 DAPK1P53355 1430 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 ZKSCAN2Q63HK3 967 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 NESP48681 1621 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 PCF11O94913 1555 aaKnown RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 GRIN2BQ13224 1484 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 PDE4AP27815 886 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 HOOK1Q9UJC3 728 aaKnown RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 SYNJ2O15056 1496 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 NUCB2P80303 420 aa5.44□□□□□ -1.54
CHD9-201ENST00000219084 ANO8Q9HCE9 1232 aaPredicted RBP5.44□□□□□ -1.54
CHD9-201ENST00000219084 RUFY2Q8WXA3 655 aa5.43□□□□□ -1.54
CHD9-201ENST00000219084 POLA1P09884 1462 aaPredicted RBP5.43□□□□□ -1.54
CHD9-201ENST00000219084 KIF7Q2M1P5 1343 aa5.43□□□□□ -1.54
CHD9-201ENST00000219084 PRXQ9BXM0 1461 aa5.43□□□□□ -1.54
CHD9-201ENST00000219084 ARHGAP5Q13017 1502 aa5.43□□□□□ -1.54
CHD9-201ENST00000219084 SMG6Q86US8 1419 aaKnown RBP5.43□□□□□ -1.54
CHD9-201ENST00000219084 TPM1P09493 284 aa5.42□□□□□ -1.54
CHD9-201ENST00000219084 TEX35Q5T0J7 233 aa5.42□□□□□ -1.54
CHD9-201ENST00000219084 TNNT3P45378 269 aaPredicted RBP5.42□□□□□ -1.54
CHD9-201ENST00000219084 MCM2P49736 904 aa5.42□□□□□ -1.54
CHD9-201ENST00000219084 CHMP5Q9NZZ3 219 aa5.42□□□□□ -1.54
CHD9-201ENST00000219084 MFAP1P55081 439 aaKnown RBP5.41□□□□□ -1.54
CHD9-201ENST00000219084 VGFO15240 615 aaPredicted RBP5.41□□□□□ -1.54
CHD9-201ENST00000219084 TPM2P07951 284 aa5.41□□□□□ -1.54
CHD9-201ENST00000219084 CCP110O43303 1012 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms