RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
SPTLC2-201ENST00000216484 RSF1Q96T23 1441 aaPredicted RBP18■□□□□ 0.47
SPTLC2-201ENST00000216484 H0YHG0 523 aa18■□□□□ 0.47
SPTLC2-201ENST00000216484 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
SPTLC2-201ENST00000216484 SCRIBQ14160 1630 aa17.99■□□□□ 0.47
SPTLC2-201ENST00000216484 ANKRD20A12PQ8NF67 263 aa17.99■□□□□ 0.47
SPTLC2-201ENST00000216484 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.98■□□□□ 0.47
SPTLC2-201ENST00000216484 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
SPTLC2-201ENST00000216484 RCAN3Q9UKA8 241 aa17.98■□□□□ 0.47
SPTLC2-201ENST00000216484 IPO9Q96P70 1041 aaKnown RBP17.97■□□□□ 0.47
SPTLC2-201ENST00000216484 STK31Q9BXU1 1019 aa17.97■□□□□ 0.47
SPTLC2-201ENST00000216484 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
SPTLC2-201ENST00000216484 DDX49Q9Y6V7 483 aaKnown RBP17.96■□□□□ 0.47
SPTLC2-201ENST00000216484 DCTN1Q14203 1278 aa17.96■□□□□ 0.47
SPTLC2-201ENST00000216484 HSP90AB2PQ58FF8 381 aa17.95■□□□□ 0.46
SPTLC2-201ENST00000216484 ZFYVE27Q5T4F4 411 aa17.95■□□□□ 0.46
SPTLC2-201ENST00000216484 CTDP1Q9Y5B0 961 aaPredicted RBP17.95■□□□□ 0.46
SPTLC2-201ENST00000216484 SMC4Q9NTJ3 1288 aa17.95■□□□□ 0.46
SPTLC2-201ENST00000216484 TRIM34Q9BYJ4 488 aa17.95■□□□□ 0.46
SPTLC2-201ENST00000216484 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
SPTLC2-201ENST00000216484 GTF2E1P29083 439 aaPredicted RBP17.94■□□□□ 0.46
SPTLC2-201ENST00000216484 HSP90B2PQ58FF3 399 aa17.94■□□□□ 0.46
SPTLC2-201ENST00000216484 SKIDA1Q1XH10 827 aa17.94■□□□□ 0.46
SPTLC2-201ENST00000216484 DCAF11Q8TEB1 546 aa17.94■□□□□ 0.46
SPTLC2-201ENST00000216484 RILPL2Q969X0 211 aa17.93■□□□□ 0.46
SPTLC2-201ENST00000216484 HOOK1Q9UJC3 728 aaKnown RBP17.93■□□□□ 0.46
SPTLC2-201ENST00000216484 ACBD3Q9H3P7 528 aa17.93■□□□□ 0.46
SPTLC2-201ENST00000216484 FBXW7Q969H0 707 aa17.93■□□□□ 0.46
SPTLC2-201ENST00000216484 HSP90AB3PQ58FF7 597 aa17.93■□□□□ 0.46
SPTLC2-201ENST00000216484 CFDP1Q9UEE9 299 aaPredicted RBP17.92■□□□□ 0.46
SPTLC2-201ENST00000216484 EPS15P42566 896 aa17.92■□□□□ 0.46
SPTLC2-201ENST00000216484 STK26Q9P289 416 aa17.92■□□□□ 0.46
SPTLC2-201ENST00000216484 U2AF1L5P0DN76 240 aaPredicted RBP17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 U2AF1Q01081 240 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 CCDC43Q96MW1 224 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 CWC15Q9P013 229 aaKnown RBP17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 TRIM29Q14134 588 aa17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 SYNE3Q6ZMZ3 975 aa17.91■□□□□ 0.46
SPTLC2-201ENST00000216484 CCDC47Q96A33 483 aaKnown RBP17.9■□□□□ 0.46
SPTLC2-201ENST00000216484 ARGLU1Q9NWB6 273 aaPredicted RBP17.9■□□□□ 0.46
SPTLC2-201ENST00000216484 HDAC5Q9UQL6 1122 aa17.9■□□□□ 0.46
SPTLC2-201ENST00000216484 CLIP1P30622 1438 aa17.9■□□□□ 0.46
SPTLC2-201ENST00000216484 KTN1Q86UP2 1357 aaKnown RBP17.9■□□□□ 0.46
SPTLC2-201ENST00000216484 HDGFL2Q7Z4V5 671 aaPredicted RBP17.89■□□□□ 0.45
SPTLC2-201ENST00000216484 HDGFP51858 240 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-201ENST00000216484 ZRSR2Q15696 482 aaKnown RBP17.88■□□□□ 0.45
SPTLC2-201ENST00000216484 CCDC173Q0VFZ6 552 aa17.88■□□□□ 0.45
SPTLC2-201ENST00000216484 SKOR2Q2VWA4 1001 aaPredicted RBP17.87■□□□□ 0.45
SPTLC2-201ENST00000216484 CAGE1Q8TC20 777 aa17.87■□□□□ 0.45
SPTLC2-201ENST00000216484 AMOTL1Q8IY63 956 aa17.87■□□□□ 0.45
SPTLC2-201ENST00000216484 KANK1Q14678 1352 aa17.87■□□□□ 0.45
SPTLC2-201ENST00000216484 CHMP4AQ9BY43 222 aa17.86■□□□□ 0.45
SPTLC2-201ENST00000216484 MNS1Q8NEH6 495 aa17.86■□□□□ 0.45
SPTLC2-201ENST00000216484 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
SPTLC2-201ENST00000216484 IFT57Q9NWB7 429 aa17.85■□□□□ 0.45
SPTLC2-201ENST00000216484 MLECQ14165 292 aa17.85■□□□□ 0.45
SPTLC2-201ENST00000216484 MYO6Q9UM54 1294 aa17.85■□□□□ 0.45
SPTLC2-201ENST00000216484 PAF1Q8N7H5 531 aa17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 CWC22Q9HCG8 908 aaKnown RBP17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 GSE1Q14687 1217 aa17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 NOL10Q9BSC4 688 aaKnown RBP17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 SIN3AQ96ST3 1273 aa17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 NEFHP12036 1026 aa17.84■□□□□ 0.45
SPTLC2-201ENST00000216484 DHX16O60231 1041 aaKnown RBP17.83■□□□□ 0.45
SPTLC2-201ENST00000216484 CHMP4CQ96CF2 233 aa17.83■□□□□ 0.45
SPTLC2-201ENST00000216484 TTLL5Q6EMB2 1281 aa17.83■□□□□ 0.45
SPTLC2-201ENST00000216484 DHX37Q8IY37 1157 aaKnown RBP17.83■□□□□ 0.44
SPTLC2-201ENST00000216484 CLUAP1Q96AJ1 413 aa17.83■□□□□ 0.44
SPTLC2-201ENST00000216484 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-201ENST00000216484 R3HCC1Q9Y3T6 440 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-201ENST00000216484 BICD2Q8TD16 824 aa17.81■□□□□ 0.44
SPTLC2-201ENST00000216484 TSPYL1Q9H0U9 437 aa17.81■□□□□ 0.44
SPTLC2-201ENST00000216484 SASS6Q6UVJ0 657 aa17.81■□□□□ 0.44
SPTLC2-201ENST00000216484 CPLX2Q6PUV4 134 aaKnown RBP17.8■□□□□ 0.44
SPTLC2-201ENST00000216484 ANKRD62A6NC57 917 aa17.79■□□□□ 0.44
SPTLC2-201ENST00000216484 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
SPTLC2-201ENST00000216484 DYDC1Q8WWB3 177 aa17.79■□□□□ 0.44
SPTLC2-201ENST00000216484 OFD1O75665 1012 aa17.78■□□□□ 0.44
SPTLC2-201ENST00000216484 NEXNQ0ZGT2 675 aa17.78■□□□□ 0.44
SPTLC2-201ENST00000216484 SAMD1Q6SPF0 538 aaPredicted RBP17.78■□□□□ 0.44
SPTLC2-201ENST00000216484 SEPT7Q16181 437 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-201ENST00000216484 PDILTQ8N807 584 aa17.78■□□□□ 0.44
SPTLC2-201ENST00000216484 ANKRD45Q5TZF3 282 aa17.77■□□□□ 0.44
SPTLC2-201ENST00000216484 LRRFIP1Q32MZ4 808 aaKnown RBP17.77■□□□□ 0.44
SPTLC2-201ENST00000216484 LEKR1Q6ZMV7 388 aa17.77■□□□□ 0.44
SPTLC2-201ENST00000216484 FOSBP53539 338 aa17.77■□□□□ 0.43
SPTLC2-201ENST00000216484 CPLX1O14810 134 aa17.76■□□□□ 0.43
SPTLC2-201ENST00000216484 ENOX2Q16206 610 aaKnown RBP17.76■□□□□ 0.43
SPTLC2-201ENST00000216484 VPS37DQ86XT2 251 aa17.76■□□□□ 0.43
SPTLC2-201ENST00000216484 FAM43AQ8N2R8 423 aa17.76■□□□□ 0.43
SPTLC2-201ENST00000216484 CCDC66A2RUB6 948 aa17.75■□□□□ 0.43
SPTLC2-201ENST00000216484 CCDC146Q8IYE0 955 aa17.75■□□□□ 0.43
SPTLC2-201ENST00000216484 NFXL1Q6ZNB6 911 aa17.75■□□□□ 0.43
SPTLC2-201ENST00000216484 SLC4A3P48751 1232 aa17.75■□□□□ 0.43
SPTLC2-201ENST00000216484 AXDND1Q5T1B0 1012 aaPredicted RBP17.74■□□□□ 0.43
SPTLC2-201ENST00000216484 DIAPH3Q9NSV4 1193 aa17.74■□□□□ 0.43
SPTLC2-201ENST00000216484 ERCC4Q92889 916 aaPredicted RBP17.74■□□□□ 0.43
SPTLC2-201ENST00000216484 ROCK2O75116 1388 aaKnown RBP17.74■□□□□ 0.43
SPTLC2-201ENST00000216484 ANO2Q9NQ90 1003 aa17.73■□□□□ 0.43
SPTLC2-201ENST00000216484 CLASRPQ8N2M8 674 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms