RNA–Protein interactions for RNA: ENSMUST00000228044.1

Ldb3-208, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 BASIC

Gene Ldb3, Length 1,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-208ENSMUST00000228044 AglF8VPN4 1532 aa21.94■■□□□ 1.1
Ldb3-208ENSMUST00000228044 ShprhQ7TPQ3 1674 aa21.93■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Kdm5cP41230 1554 aa21.93■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Robo2Q7TPD3 1470 aa21.92■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Kif1bQ60575 1816 aaKnown RBP21.92■■□□□ 1.1
Ldb3-208ENSMUST00000228044 OvosQ3UU35 1456 aa21.92■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Depdc5P61460 1591 aa21.89■■□□□ 1.1
Ldb3-208ENSMUST00000228044 Zbtb7cQ8VCZ7 619 aa21.89■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Cd109Q8R422 1442 aa21.88■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Kiaa0556Q8C753 1610 aa21.88■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Dot1lQ6XZL8 1540 aa21.87■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Atp10aO54827 1508 aa21.87■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Myo5cE9Q1F5 1742 aa21.86■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Znf518aB2RRF6 1478 aaKnown RBP21.86■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Pde4cQ3UEI1 686 aa21.86■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Ttc37F8VPK0 1563 aa21.85■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Gm13697A2AK42 830 aa21.85■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Atp7aQ64430 1491 aa21.84■■□□□ 1.09
Ldb3-208ENSMUST00000228044 Mbd5B1AYB6 1498 aa21.8■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Rock1P70335 1354 aa21.79■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Topbp1Q6ZQF0 1515 aa21.79■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Myom3A2ABU4 1439 aa21.79■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Plch2A2AP18 1501 aa21.79■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Fndc1E9Q043 1732 aa21.78■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Ptch1Q61115 1434 aa21.78■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Nsd2Q8BVE8 1365 aa21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 RereQ80TZ9 1558 aa21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Cdc42bpgQ80UW5 1551 aa21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Hnrnpul2Q00PI9 745 aaKnown RBP21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Rgl3Q3UYI5 709 aa21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Kif3bQ61771 747 aa21.77■■□□□ 1.08
Ldb3-208ENSMUST00000228044 Dip2cE9PWR4 1557 aa21.77■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Tarbp1E9Q368 1579 aa21.76■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Neurod1Q60867 357 aa21.76■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Ppip5k1A2ARP1 1436 aa21.76■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Cul9Q80TT8 1865 aa21.75■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Ppp1r18Q8BQ30 594 aa21.75■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Tmem131lQ3U3D7 1597 aa21.73■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Iqgap1Q9JKF1 1657 aaKnown RBP21.72■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Ylpm1Q9R0I7 1386 aaKnown RBP21.72■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Abca6Q8K441 1624 aa21.72■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Gli2Q0VGT2 1544 aa21.72■■□□□ 1.07
Ldb3-208ENSMUST00000228044 AdgbG3UZ78 1657 aa21.71■■□□□ 1.07
Ldb3-208ENSMUST00000228044 Edc4Q3UJB9 1406 aaKnown RBP21.7■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Mug2P28666 1451 aa21.7■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Uggt2E9Q4X2 1504 aa21.7■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Naip6Q9JIB6 1403 aa21.68■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Prex1Q69ZK0 1650 aa21.67■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Hecw2Q6I6G8 1578 aa21.67■■□□□ 1.06
Ldb3-208ENSMUST00000228044 AnkarA2RT91 1465 aa21.67■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Washc2Q6PGL7 1334 aa21.67■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Cpsf1Q9EPU4 1441 aaKnown RBP21.67■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Synj2Q9D2G5 1434 aa21.66■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Ttbk1Q6PCN3 1308 aa21.66■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Trpm1Q2TV84 1622 aa21.66■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Sin3aQ60520 1274 aaKnown RBP21.65■■□□□ 1.06
Ldb3-208ENSMUST00000228044 Dapk1Q80YE7 1442 aa21.64■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Hdac5Q9Z2V6 1113 aa21.64■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Polr3aB2RXC6 1390 aa21.63■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Cdk13Q69ZA1 1511 aaKnown RBP21.63■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Yeats2Q3TUF7 1407 aa21.62■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Ttc21bQ0HA38 1315 aa21.61■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Iqgap3F8VQ29 1632 aa21.6■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Ncoa1P70365 1447 aa21.59■■□□□ 1.05
Ldb3-208ENSMUST00000228044 Adamts13Q769J6 1426 aa21.59■■□□□ 1.05
Ldb3-208ENSMUST00000228044 RalgapbQ8BQZ4 1484 aa21.58■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Grwd1Q810D6 446 aaKnown RBP21.58■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Rundc1Q0VDN7 615 aa21.54■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Abca8aQ8K442 1620 aa21.54■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Abcc6Q9R1S7 1498 aa21.54■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Prdm2A2A7B5 1709 aaKnown RBP21.54■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Cfap65Q3V0B4 1847 aa21.53■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Akap12Q9WTQ5 1684 aa21.53■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Tulp4Q9JIL5 1547 aa21.53■■□□□ 1.04
Ldb3-208ENSMUST00000228044 Erich6D3Z6S9 713 aa21.52■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Mapk8ip2Q9ERE9 830 aa21.52■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Card11Q8CIS0 1159 aa21.5■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Zmym4A2A791 1549 aaKnown RBP21.5■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Mroh3A0A1D5RM54 893 aa21.49■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Adamts7Q68SA9 1657 aa21.49■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Cwc22Q8C5N3 908 aaKnown RBP21.48■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Tecpr2Q3UH45 1423 aa21.48■■□□□ 1.03
Ldb3-208ENSMUST00000228044 ErbinQ80TH2 1402 aa21.48■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Ino80Q6ZPV2 1559 aa21.47■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Ehbp1l1Q99MS7 1716 aa21.47■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Sall3Q62255 1320 aa21.47■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Adgrb3Q80ZF8 1522 aa21.47■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Talpid3E9PV87 1520 aa21.46■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Ifit1bl1D3Z6F0 470 aa21.46■■□□□ 1.03
Ldb3-208ENSMUST00000228044 Efcab6Q6P1E8 1516 aa21.44■■□□□ 1.02
Ldb3-208ENSMUST00000228044 Qser1A2BIE1 1698 aa21.43■■□□□ 1.02
Ldb3-208ENSMUST00000228044 Nop58Q6DFW4 536 aaKnown RBP21.42■■□□□ 1.02
Ldb3-208ENSMUST00000228044 NpatQ8BMA5 1420 aa21.4■■□□□ 1.02
Ldb3-208ENSMUST00000228044 Cep152A2AUM9 1736 aaKnown RBP21.4■■□□□ 1.02
Ldb3-208ENSMUST00000228044 Knl1Q66JQ7 1612 aa21.39■■□□□ 1.02
Ldb3-208ENSMUST00000228044 Stk24Q99KH8 431 aa21.39■■□□□ 1.02
Ldb3-208ENSMUST00000228044 AatkQ80YE4 1365 aa21.39■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Setd1aE9PYH6 1716 aa21.38■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Rock2P70336 1388 aa21.37■■□□□ 1.01
Ldb3-208ENSMUST00000228044 Rims1Q99NE5 1463 aa21.37■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 17.4 ms