RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Abca9Q8K449 1623 aa18.77■□□□□ 0.6
Rnf4-204ENSMUST00000182047 Neurl4Q5NCX5 1563 aa18.76■□□□□ 0.59
Rnf4-204ENSMUST00000182047 PtprgQ05909 1442 aa18.76■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Clstn2Q9ER65 966 aa18.75■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Prdm16A2A935 1275 aa18.75■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Cd109Q8R422 1442 aa18.73■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Grwd1Q810D6 446 aaKnown RBP18.72■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Tnnt3Q9QZ47 272 aa18.72■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Pde4cQ3UEI1 686 aa18.71■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Slc24a1Q91WD8 1130 aa18.71■□□□□ 0.59
Rnf4-204ENSMUST00000182047 Lemd3Q9WU40 921 aa18.7■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Atp7aQ64430 1491 aa18.7■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Dot1lQ6XZL8 1540 aa18.7■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Pprc1Q6NZN1 1644 aa18.69■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Usp54Q8BL06 1588 aaKnown RBP18.68■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Xrn1P97789 1719 aaKnown RBP18.68■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Ak9G3UYQ4 1894 aa18.66■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Myt1Q8CFC2 1127 aa18.66■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Kif3bQ61771 747 aa18.66■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Mug2P28666 1451 aa18.65■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Mbd5B1AYB6 1498 aa18.65■□□□□ 0.58
Rnf4-204ENSMUST00000182047 ShprhQ7TPQ3 1674 aa18.64■□□□□ 0.58
Rnf4-204ENSMUST00000182047 Dapk1Q80YE7 1442 aa18.64■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Washc2Q6PGL7 1334 aa18.64■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Rundc1Q0VDN7 615 aa18.63■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Cdk13Q69ZA1 1511 aaKnown RBP18.63■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Tarbp1E9Q368 1579 aa18.63■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Abca17E9PX95 1733 aa18.63■□□□□ 0.57
Rnf4-204ENSMUST00000182047 DroshaQ5HZJ0 1373 aaKnown RBP18.62■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Robo2Q7TPD3 1470 aa18.61■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Kif1bQ60575 1816 aaKnown RBP18.61■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Myom3A2ABU4 1439 aa18.61■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Nos1Q9Z0J4 1429 aa18.61■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Adgrl3Q80TS3 1537 aa18.6■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Ncoa1P70365 1447 aa18.6■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Erich6D3Z6S9 713 aa18.6■□□□□ 0.57
Rnf4-204ENSMUST00000182047 Card11Q8CIS0 1159 aa18.57■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Znf710Q3U288 666 aa18.57■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Rock1P70335 1354 aa18.57■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Ptch1Q61115 1434 aa18.56■□□□□ 0.56
Rnf4-204ENSMUST00000182047 OvosQ3UU35 1456 aa18.56■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Depdc5P61460 1591 aa18.55■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Edc4Q3UJB9 1406 aaKnown RBP18.55■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Myo5cE9Q1F5 1742 aa18.53■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Zbtb4Q5F293 982 aa18.53■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Iqgap1Q9JKF1 1657 aaKnown RBP18.52■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Znf518aB2RRF6 1478 aaKnown RBP18.52■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Sall3Q62255 1320 aa18.52■□□□□ 0.56
Rnf4-204ENSMUST00000182047 Ifit1bl1D3Z6F0 470 aa18.52■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Nsd2Q8BVE8 1365 aa18.52■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Col17a1Q07563 1470 aa18.52■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Stra8P70278 393 aa18.51■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Polr3aB2RXC6 1390 aa18.51■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Cpsf1Q9EPU4 1441 aaKnown RBP18.51■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Mroh3A0A1D5RM54 893 aa18.5■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Ppp1r18Q8BQ30 594 aa18.5■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Kdm5cP41230 1554 aa18.49■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Smg6P61406 1418 aaKnown RBP18.49■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Naip6Q9JIB6 1403 aa18.49■□□□□ 0.55
Rnf4-204ENSMUST00000182047 RalgapbQ8BQZ4 1484 aa18.49■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Abca6Q8K441 1624 aa18.48■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Ylpm1Q9R0I7 1386 aaKnown RBP18.47■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Ppip5k1A2ARP1 1436 aa18.47■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Fndc1E9Q043 1732 aa18.47■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Adamts13Q769J6 1426 aa18.47■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Ttc21bQ0HA38 1315 aa18.46■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Cwc22Q8C5N3 908 aaKnown RBP18.46■□□□□ 0.55
Rnf4-204ENSMUST00000182047 Atp10aO54827 1508 aa18.45■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Gli2Q0VGT2 1544 aa18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Eif5bQ05D44 1216 aaKnown RBP18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Calr4Q3TQS0 420 aa18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Stk24Q99KH8 431 aa18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 AglF8VPN4 1532 aa18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Clasp1Q80TV8 1535 aaKnown RBP18.44■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Anp32aO35381 247 aa18.43■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Dip2cE9PWR4 1557 aa18.43■□□□□ 0.54
Rnf4-204ENSMUST00000182047 AnkarA2RT91 1465 aa18.42■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Prex1Q69ZK0 1650 aa18.41■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Tulp4Q9JIL5 1547 aa18.41■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Yeats2Q3TUF7 1407 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Topbp1Q6ZQF0 1515 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Kdm2aP59997 1161 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Tmem131lQ3U3D7 1597 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 RereQ80TZ9 1558 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Ttbk1Q6PCN3 1308 aa18.4■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Nolc1E9Q5C9 702 aaKnown RBP18.39■□□□□ 0.54
Rnf4-204ENSMUST00000182047 Abcc6Q9R1S7 1498 aa18.39■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Plekhg5Q66T02 1073 aa18.37■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Cdc42bpgQ80UW5 1551 aa18.36■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Plch2A2AP18 1501 aa18.36■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Wwc2Q6NXJ0 1187 aa18.36■□□□□ 0.53
Rnf4-204ENSMUST00000182047 AdgbG3UZ78 1657 aa18.36■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Cul9Q80TT8 1865 aa18.35■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Iqgap3F8VQ29 1632 aa18.35■□□□□ 0.53
Rnf4-204ENSMUST00000182047 ErbinQ80TH2 1402 aa18.35■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Ttc37F8VPK0 1563 aa18.35■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Hdac5Q9Z2V6 1113 aa18.34■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Kiaa0556Q8C753 1610 aa18.33■□□□□ 0.53
Rnf4-204ENSMUST00000182047 Uggt2E9Q4X2 1504 aa18.32■□□□□ 0.52
Rnf4-204ENSMUST00000182047 Cfap65Q3V0B4 1847 aa18.31■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 11.6 ms