RNA–Protein interactions for RNA: ENSMUST00000131537.8

Lig3-204, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-204ENSMUST00000131537 Pde4cQ3UEI1 686 aa29.45■■■□□ 2.31
Lig3-204ENSMUST00000131537 Ccer2J3QPU5 274 aa29.44■■■□□ 2.3
Lig3-204ENSMUST00000131537 Ttll5Q8CHB8 1328 aa29.4■■■□□ 2.3
Lig3-204ENSMUST00000131537 Trpm2Q91YD4 1506 aa29.39■■■□□ 2.29
Lig3-204ENSMUST00000131537 Topbp1Q6ZQF0 1515 aa29.38■■■□□ 2.29
Lig3-204ENSMUST00000131537 Mphosph9A6H5Y1 991 aa29.38■■■□□ 2.29
Lig3-204ENSMUST00000131537 Afap1Q80YS6 731 aa29.38■■■□□ 2.29
Lig3-204ENSMUST00000131537 Trpm1Q2TV84 1622 aa29.37■■■□□ 2.29
Lig3-204ENSMUST00000131537 Plch2A2AP18 1501 aa29.37■■■□□ 2.29
Lig3-204ENSMUST00000131537 Alpk3Q924C5 1678 aa29.37■■■□□ 2.29
Lig3-204ENSMUST00000131537 ShprhQ7TPQ3 1674 aa29.36■■■□□ 2.29
Lig3-204ENSMUST00000131537 Adamtsl3G3UXC7 1706 aa29.35■■■□□ 2.29
Lig3-204ENSMUST00000131537 MlecQ6ZQI3 291 aaKnown RBP29.32■■■□□ 2.28
Lig3-204ENSMUST00000131537 Uggt2E9Q4X2 1504 aa29.32■■■□□ 2.28
Lig3-204ENSMUST00000131537 Kif1bQ60575 1816 aaKnown RBP29.31■■■□□ 2.28
Lig3-204ENSMUST00000131537 Safb2Q80YR5 991 aaKnown RBP29.31■■■□□ 2.28
Lig3-204ENSMUST00000131537 Trak1Q6PD31 939 aa29.29■■■□□ 2.28
Lig3-204ENSMUST00000131537 Acin1Q9JIX8 1338 aaKnown RBP29.29■■■□□ 2.28
Lig3-204ENSMUST00000131537 Myo5cE9Q1F5 1742 aa29.26■■■□□ 2.28
Lig3-204ENSMUST00000131537 Naip5Q9R016 1403 aa29.26■■■□□ 2.27
Lig3-204ENSMUST00000131537 Asxl1P59598 1514 aa29.26■■■□□ 2.27
Lig3-204ENSMUST00000131537 Camsap2Q8C1B1 1461 aa29.25■■■□□ 2.27
Lig3-204ENSMUST00000131537 Eid3Q3V124 375 aa29.24■■■□□ 2.27
Lig3-204ENSMUST00000131537 Supt6hQ62383 1726 aaKnown RBP29.23■■■□□ 2.27
Lig3-204ENSMUST00000131537 Rsph4aQ8BYM7 716 aa29.21■■■□□ 2.27
Lig3-204ENSMUST00000131537 PtprgQ05909 1442 aa29.2■■■□□ 2.27
Lig3-204ENSMUST00000131537 Cd109Q8R422 1442 aa29.19■■■□□ 2.26
Lig3-204ENSMUST00000131537 Robo2Q7TPD3 1470 aa29.18■■■□□ 2.26
Lig3-204ENSMUST00000131537 Abca6Q8K441 1624 aa29.17■■■□□ 2.26
Lig3-204ENSMUST00000131537 Myom3A2ABU4 1439 aa29.17■■■□□ 2.26
Lig3-204ENSMUST00000131537 Ttc21bQ0HA38 1315 aa29.16■■■□□ 2.26
Lig3-204ENSMUST00000131537 Pkd2O35245 966 aa29.16■■■□□ 2.26
Lig3-204ENSMUST00000131537 Lamc1P02468 1607 aaKnown RBP29.15■■■□□ 2.26
Lig3-204ENSMUST00000131537 Prex1Q69ZK0 1650 aa29.15■■■□□ 2.26
Lig3-204ENSMUST00000131537 Nsd2Q8BVE8 1365 aa29.13■■■□□ 2.25
Lig3-204ENSMUST00000131537 Ylpm1Q9R0I7 1386 aaKnown RBP29.13■■■□□ 2.25
Lig3-204ENSMUST00000131537 CltcQ68FD5 1675 aaKnown RBP29.1■■■□□ 2.25
Lig3-204ENSMUST00000131537 Dhx9O70133 1380 aaKnown RBP29.09■■■□□ 2.25
Lig3-204ENSMUST00000131537 MyclP10166 368 aa29.09■■■□□ 2.25
Lig3-204ENSMUST00000131537 Ankrd36D3Z4K0 1415 aa29.08■■■□□ 2.25
Lig3-204ENSMUST00000131537 Myom2Q14BI5 1463 aa29.06■■■□□ 2.24
Lig3-204ENSMUST00000131537 Atp7aQ64430 1491 aa29.05■■■□□ 2.24
Lig3-204ENSMUST00000131537 Kif21bQ9QXL1 1668 aa29.05■■■□□ 2.24
Lig3-204ENSMUST00000131537 AnkarA2RT91 1465 aa29.05■■■□□ 2.24
Lig3-204ENSMUST00000131537 Tmem131lQ3U3D7 1597 aa29.03■■■□□ 2.24
Lig3-204ENSMUST00000131537 Erich6D3Z6S9 713 aa29.03■■■□□ 2.24
Lig3-204ENSMUST00000131537 Talpid3E9PV87 1520 aa29.01■■■□□ 2.24
Lig3-204ENSMUST00000131537 Gm13697A2AK42 830 aa29.01■■■□□ 2.23
Lig3-204ENSMUST00000131537 RictorQ6QI06 1708 aa29■■■□□ 2.23
Lig3-204ENSMUST00000131537 NefmP08553 848 aa29■■■□□ 2.23
Lig3-204ENSMUST00000131537 Adamts7Q68SA9 1657 aa29■■■□□ 2.23
Lig3-204ENSMUST00000131537 Hfm1D3Z4R1 1434 aa28.99■■■□□ 2.23
Lig3-204ENSMUST00000131537 Arhgap23Q69ZH9 1483 aa28.99■■■□□ 2.23
Lig3-204ENSMUST00000131537 Hspa5P20029 655 aaKnown RBP28.96■■■□□ 2.23
Lig3-204ENSMUST00000131537 Knl1Q66JQ7 1612 aa28.95■■■□□ 2.23
Lig3-204ENSMUST00000131537 Edc4Q3UJB9 1406 aaKnown RBP28.92■■■□□ 2.22
Lig3-204ENSMUST00000131537 Stk24Q99KH8 431 aa28.9■■■□□ 2.22
Lig3-204ENSMUST00000131537 Med14A2ABV5 1459 aaKnown RBP28.89■■■□□ 2.22
Lig3-204ENSMUST00000131537 Akap12Q9WTQ5 1684 aa28.88■■■□□ 2.21
Lig3-204ENSMUST00000131537 Tarbp1E9Q368 1579 aa28.85■■■□□ 2.21
Lig3-204ENSMUST00000131537 Usp47Q8BY87 1376 aa28.85■■■□□ 2.21
Lig3-204ENSMUST00000131537 Hdac5Q9Z2V6 1113 aa28.85■■■□□ 2.21
Lig3-204ENSMUST00000131537 PtprmP28828 1452 aa28.84■■■□□ 2.21
Lig3-204ENSMUST00000131537 Pik3c2gO70167 1506 aa28.84■■■□□ 2.21
Lig3-204ENSMUST00000131537 Iqgap3F8VQ29 1632 aa28.83■■■□□ 2.21
Lig3-204ENSMUST00000131537 Sall3Q62255 1320 aa28.83■■■□□ 2.21
Lig3-204ENSMUST00000131537 Dip2bQ3UH60 1574 aa28.82■■■□□ 2.2
Lig3-204ENSMUST00000131537 4930407I10RikD3Z5T8 1512 aa28.82■■■□□ 2.2
Lig3-204ENSMUST00000131537 Rprd2Q6NXI6 1469 aaKnown RBP28.81■■■□□ 2.2
Lig3-204ENSMUST00000131537 ErbinQ80TH2 1402 aa28.81■■■□□ 2.2
Lig3-204ENSMUST00000131537 Dot1lQ6XZL8 1540 aa28.8■■■□□ 2.2
Lig3-204ENSMUST00000131537 Tecpr2Q3UH45 1423 aa28.79■■■□□ 2.2
Lig3-204ENSMUST00000131537 Abcc6Q9R1S7 1498 aa28.79■■■□□ 2.2
Lig3-204ENSMUST00000131537 Ercc6l2Q9JIM3 1537 aa28.79■■■□□ 2.2
Lig3-204ENSMUST00000131537 Ino80Q6ZPV2 1559 aa28.79■■■□□ 2.2
Lig3-204ENSMUST00000131537 Skint5A7XUY5 1461 aa28.79■■■□□ 2.2
Lig3-204ENSMUST00000131537 DroshaQ5HZJ0 1373 aaKnown RBP28.77■■■□□ 2.2
Lig3-204ENSMUST00000131537 Adgrb3Q80ZF8 1522 aa28.75■■■□□ 2.19
Lig3-204ENSMUST00000131537 Rgl3Q3UYI5 709 aa28.75■■■□□ 2.19
Lig3-204ENSMUST00000131537 Brwd3A2AHJ4 1799 aa28.75■■■□□ 2.19
Lig3-204ENSMUST00000131537 Ahdc1Q6PAL7 1594 aaKnown RBP28.74■■■□□ 2.19
Lig3-204ENSMUST00000131537 Ppip5k1A2ARP1 1436 aa28.74■■■□□ 2.19
Lig3-204ENSMUST00000131537 Efcab6Q6P1E8 1516 aa28.72■■■□□ 2.19
Lig3-204ENSMUST00000131537 TonslQ6NZL6 1363 aa28.72■■■□□ 2.19
Lig3-204ENSMUST00000131537 Washc2Q6PGL7 1334 aa28.72■■■□□ 2.19
Lig3-204ENSMUST00000131537 Mroh3A0A1D5RM54 893 aa28.72■■■□□ 2.19
Lig3-204ENSMUST00000131537 Rock1P70335 1354 aa28.71■■■□□ 2.19
Lig3-204ENSMUST00000131537 AatkQ80YE4 1365 aa28.71■■■□□ 2.19
Lig3-204ENSMUST00000131537 Bcl9Q9D219 1425 aa28.7■■■□□ 2.18
Lig3-204ENSMUST00000131537 Abca8aQ8K442 1620 aa28.67■■■□□ 2.18
Lig3-204ENSMUST00000131537 Prdm2A2A7B5 1709 aaKnown RBP28.67■■■□□ 2.18
Lig3-204ENSMUST00000131537 Uggt1Q6P5E4 1551 aa28.63■■■□□ 2.17
Lig3-204ENSMUST00000131537 Neurod1Q60867 357 aa28.62■■■□□ 2.17
Lig3-204ENSMUST00000131537 GphnQ8BUV3 769 aaKnown RBP28.62■■■□□ 2.17
Lig3-204ENSMUST00000131537 Kif13aQ9EQW7 1749 aa28.61■■■□□ 2.17
Lig3-204ENSMUST00000131537 Topaz1E5FYH1 1653 aa28.6■■■□□ 2.17
Lig3-204ENSMUST00000131537 Ehbp1l1Q99MS7 1716 aa28.6■■■□□ 2.17
Lig3-204ENSMUST00000131537 Naip7Q9JIB3 1402 aa28.59■■■□□ 2.17
Lig3-204ENSMUST00000131537 Itsn1Q9Z0R4 1714 aa28.59■■■□□ 2.17
Lig3-204ENSMUST00000131537 Prrc2bQ7TPM1 1486 aaKnown RBP28.59■■■□□ 2.17
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms