RNA–Protein interactions for RNA: ENSMUST00000113701.7

Tpm1-214, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,677 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-214ENSMUST00000113701 ShprhQ7TPQ3 1674 aa22.22■■□□□ 1.15
Tpm1-214ENSMUST00000113701 NefmP08553 848 aa22.21■■□□□ 1.15
Tpm1-214ENSMUST00000113701 Kif14L0N7N1 1674 aaKnown RBP22.21■■□□□ 1.15
Tpm1-214ENSMUST00000113701 Gli2Q0VGT2 1544 aa22.2■■□□□ 1.15
Tpm1-214ENSMUST00000113701 Kif1bQ60575 1816 aaKnown RBP22.2■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Naip6Q9JIB6 1403 aa22.2■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Zfp644E9QA22 1323 aa22.19■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Robo2Q7TPD3 1470 aa22.19■■□□□ 1.14
Tpm1-214ENSMUST00000113701 NpatQ8BMA5 1420 aa22.17■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Myo5cE9Q1F5 1742 aa22.17■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Mphosph9A6H5Y1 991 aa22.16■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Rpgrip1Q9EPQ2 1331 aa22.16■■□□□ 1.14
Tpm1-214ENSMUST00000113701 PtprgQ05909 1442 aa22.16■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Ube2uB1AUC4 352 aa22.15■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Map4P27546 1125 aaKnown RBP22.15■■□□□ 1.14
Tpm1-214ENSMUST00000113701 Qser1A2BIE1 1698 aa22.14■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Ttll5Q8CHB8 1328 aa22.13■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Kif3bQ61771 747 aa22.12■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Supt6hQ62383 1726 aaKnown RBP22.12■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Camsap2Q8C1B1 1461 aa22.11■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Pde4cQ3UEI1 686 aa22.11■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Asxl1P59598 1514 aa22.1■■□□□ 1.13
Tpm1-214ENSMUST00000113701 Adamtsl3G3UXC7 1706 aa22.07■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Cfap65Q3V0B4 1847 aa22.07■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Rsph4aQ8BYM7 716 aa22.07■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Tmem131lQ3U3D7 1597 aa22.05■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Nsd2Q8BVE8 1365 aa22.05■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Ylpm1Q9R0I7 1386 aaKnown RBP22.04■■□□□ 1.12
Tpm1-214ENSMUST00000113701 DroshaQ5HZJ0 1373 aaKnown RBP22.03■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Dnajc5gQ8C632 165 aa22.03■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Myom3A2ABU4 1439 aa22.02■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Cd109Q8R422 1442 aa22.02■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Naip5Q9R016 1403 aa22.02■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Prex1Q69ZK0 1650 aa22.02■■□□□ 1.12
Tpm1-214ENSMUST00000113701 Abca6Q8K441 1624 aa22.01■■□□□ 1.11
Tpm1-214ENSMUST00000113701 Adamts7Q68SA9 1657 aa22.01■■□□□ 1.11
Tpm1-214ENSMUST00000113701 Trak1Q6PD31 939 aa22■■□□□ 1.11
Tpm1-214ENSMUST00000113701 AnkarA2RT91 1465 aa22■■□□□ 1.11
Tpm1-214ENSMUST00000113701 Pkd2O35245 966 aa21.98■■□□□ 1.11
Tpm1-214ENSMUST00000113701 Pik3c2gO70167 1506 aa21.95■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Alpk3Q924C5 1678 aa21.95■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Talpid3E9PV87 1520 aa21.94■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Eid3Q3V124 375 aa21.94■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Akap12Q9WTQ5 1684 aa21.93■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Rprd2Q6NXI6 1469 aaKnown RBP21.93■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Atp7aQ64430 1491 aa21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Hnrnpul2Q00PI9 745 aaKnown RBP21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Zbtb7cQ8VCZ7 619 aa21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Hdac5Q9Z2V6 1113 aa21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Tarbp1E9Q368 1579 aa21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Ttc21bQ0HA38 1315 aa21.92■■□□□ 1.1
Tpm1-214ENSMUST00000113701 RictorQ6QI06 1708 aa21.91■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Ppip5k1A2ARP1 1436 aa21.91■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Dhx9O70133 1380 aaKnown RBP21.9■■□□□ 1.1
Tpm1-214ENSMUST00000113701 Arhgap23Q69ZH9 1483 aa21.88■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Tecpr2Q3UH45 1423 aa21.88■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Myom2Q14BI5 1463 aa21.88■■□□□ 1.09
Tpm1-214ENSMUST00000113701 CltcQ68FD5 1675 aaKnown RBP21.87■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Edc4Q3UJB9 1406 aaKnown RBP21.86■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Afap1Q80YS6 731 aa21.86■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Senp3Q9EP97 568 aaKnown RBP21.86■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Knl1Q66JQ7 1612 aa21.86■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Dot1lQ6XZL8 1540 aa21.85■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Rock1P70335 1354 aa21.85■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Iqgap3F8VQ29 1632 aa21.85■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Ino80Q6ZPV2 1559 aa21.84■■□□□ 1.09
Tpm1-214ENSMUST00000113701 Hfm1D3Z4R1 1434 aa21.83■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Usp47Q8BY87 1376 aa21.82■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Hspa5P20029 655 aaKnown RBP21.82■■□□□ 1.08
Tpm1-214ENSMUST00000113701 TonslQ6NZL6 1363 aa21.81■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Med14A2ABV5 1459 aaKnown RBP21.8■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Uggt1Q6P5E4 1551 aa21.79■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Prdm2A2A7B5 1709 aaKnown RBP21.78■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Abca8aQ8K442 1620 aa21.77■■□□□ 1.08
Tpm1-214ENSMUST00000113701 Efcab6Q6P1E8 1516 aa21.76■■□□□ 1.07
Tpm1-214ENSMUST00000113701 Adgrb3Q80ZF8 1522 aa21.73■■□□□ 1.07
Tpm1-214ENSMUST00000113701 Kdm5aQ3UXZ9 1690 aa21.72■■□□□ 1.07
Tpm1-214ENSMUST00000113701 Dip2bQ3UH60 1574 aa21.71■■□□□ 1.07
Tpm1-214ENSMUST00000113701 Ehbp1l1Q99MS7 1716 aa21.71■■□□□ 1.07
Tpm1-214ENSMUST00000113701 Safb2Q80YR5 991 aaKnown RBP21.7■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Skint5A7XUY5 1461 aa21.7■■□□□ 1.06
Tpm1-214ENSMUST00000113701 ErbinQ80TH2 1402 aa21.7■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Ahdc1Q6PAL7 1594 aaKnown RBP21.7■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Abcc6Q9R1S7 1498 aa21.69■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Bcl9Q9D219 1425 aa21.68■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Washc2Q6PGL7 1334 aa21.65■■□□□ 1.06
Tpm1-214ENSMUST00000113701 Mroh1E0CZ22 1640 aa21.63■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Iqgap1Q9JKF1 1657 aaKnown RBP21.62■■□□□ 1.05
Tpm1-214ENSMUST00000113701 AatkQ80YE4 1365 aa21.61■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Itsn1Q9Z0R4 1714 aa21.6■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Mbd5B1AYB6 1498 aa21.6■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Adamts13Q769J6 1426 aa21.6■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Las1lA2BE28 776 aaKnown RBP21.6■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Erich6D3Z6S9 713 aa21.6■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Chd2E9PZM4 1827 aaKnown RBP21.59■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Cpsf1Q9EPU4 1441 aaKnown RBP21.59■■□□□ 1.05
Tpm1-214ENSMUST00000113701 Kif13aQ9EQW7 1749 aa21.58■■□□□ 1.04
Tpm1-214ENSMUST00000113701 Tulp4Q9JIL5 1547 aa21.57■■□□□ 1.04
Tpm1-214ENSMUST00000113701 Rgl3Q3UYI5 709 aa21.57■■□□□ 1.04
Tpm1-214ENSMUST00000113701 Ercc6l2Q9JIM3 1537 aa21.57■■□□□ 1.04
Retrieved 100 of 22,080 RNA–protein pairs in 8.5 ms