RNA–Protein interactions for RNA: ENSMUST00000113696.7

Tpm1-212, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 2 BASIC

Gene Tpm1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-212ENSMUST00000113696 Usp54Q8BL06 1588 aaKnown RBP29.86■■■□□ 2.37
Tpm1-212ENSMUST00000113696 Eid3Q3V124 375 aa29.84■■■□□ 2.37
Tpm1-212ENSMUST00000113696 Plch2A2AP18 1501 aa29.83■■■□□ 2.37
Tpm1-212ENSMUST00000113696 Abca17E9PX95 1733 aa29.83■■■□□ 2.37
Tpm1-212ENSMUST00000113696 Zmym4A2A791 1549 aaKnown RBP29.8■■■□□ 2.36
Tpm1-212ENSMUST00000113696 Ankrd36D3Z4K0 1415 aa29.8■■■□□ 2.36
Tpm1-212ENSMUST00000113696 Trak1Q6PD31 939 aa29.79■■■□□ 2.36
Tpm1-212ENSMUST00000113696 Topbp1Q6ZQF0 1515 aa29.77■■■□□ 2.36
Tpm1-212ENSMUST00000113696 Rpgrip1Q9EPQ2 1331 aa29.74■■■□□ 2.35
Tpm1-212ENSMUST00000113696 ShprhQ7TPQ3 1674 aa29.72■■■□□ 2.35
Tpm1-212ENSMUST00000113696 PtprgQ05909 1442 aa29.72■■■□□ 2.35
Tpm1-212ENSMUST00000113696 Uggt2E9Q4X2 1504 aa29.72■■■□□ 2.35
Tpm1-212ENSMUST00000113696 Lamc1P02468 1607 aaKnown RBP29.72■■■□□ 2.35
Tpm1-212ENSMUST00000113696 Kif14L0N7N1 1674 aaKnown RBP29.71■■■□□ 2.35
Tpm1-212ENSMUST00000113696 Pkd2O35245 966 aa29.71■■■□□ 2.35
Tpm1-212ENSMUST00000113696 Trpm1Q2TV84 1622 aa29.69■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Qser1A2BIE1 1698 aa29.68■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Cd109Q8R422 1442 aa29.68■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Rsph4aQ8BYM7 716 aa29.67■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Asxl1P59598 1514 aa29.67■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Robo2Q7TPD3 1470 aa29.66■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Nsd2Q8BVE8 1365 aa29.66■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Kif1bQ60575 1816 aaKnown RBP29.65■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Cul9Q80TT8 1865 aa29.65■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Myom3A2ABU4 1439 aa29.65■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Afap1Q80YS6 731 aa29.64■■■□□ 2.34
Tpm1-212ENSMUST00000113696 Naip5Q9R016 1403 aa29.63■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Supt6hQ62383 1726 aaKnown RBP29.62■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Ylpm1Q9R0I7 1386 aaKnown RBP29.62■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Cfap65Q3V0B4 1847 aa29.6■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Camsap2Q8C1B1 1461 aa29.58■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Dhx9O70133 1380 aaKnown RBP29.58■■■□□ 2.33
Tpm1-212ENSMUST00000113696 Ttc21bQ0HA38 1315 aa29.57■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Myo5cE9Q1F5 1742 aa29.57■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Safb2Q80YR5 991 aaKnown RBP29.57■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Kif21bQ9QXL1 1668 aa29.55■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Hspa5P20029 655 aaKnown RBP29.54■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Abca6Q8K441 1624 aa29.54■■■□□ 2.32
Tpm1-212ENSMUST00000113696 Atp7aQ64430 1491 aa29.53■■■□□ 2.32
Tpm1-212ENSMUST00000113696 TonslQ6NZL6 1363 aa29.51■■■□□ 2.31
Tpm1-212ENSMUST00000113696 Hdac5Q9Z2V6 1113 aa29.5■■■□□ 2.31
Tpm1-212ENSMUST00000113696 Adamtsl3G3UXC7 1706 aa29.5■■■□□ 2.31
Tpm1-212ENSMUST00000113696 Prex1Q69ZK0 1650 aa29.49■■■□□ 2.31
Tpm1-212ENSMUST00000113696 AnkarA2RT91 1465 aa29.48■■■□□ 2.31
Tpm1-212ENSMUST00000113696 Erich6D3Z6S9 713 aa29.46■■■□□ 2.31
Tpm1-212ENSMUST00000113696 Pik3c2gO70167 1506 aa29.44■■■□□ 2.3
Tpm1-212ENSMUST00000113696 DroshaQ5HZJ0 1373 aaKnown RBP29.44■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Usp47Q8BY87 1376 aa29.44■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Tmem131lQ3U3D7 1597 aa29.43■■■□□ 2.3
Tpm1-212ENSMUST00000113696 MlecQ6ZQI3 291 aaKnown RBP29.43■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Alpk3Q924C5 1678 aa29.42■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Rprd2Q6NXI6 1469 aaKnown RBP29.42■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Talpid3E9PV87 1520 aa29.4■■■□□ 2.3
Tpm1-212ENSMUST00000113696 Hfm1D3Z4R1 1434 aa29.38■■■□□ 2.29
Tpm1-212ENSMUST00000113696 Edc4Q3UJB9 1406 aaKnown RBP29.38■■■□□ 2.29
Tpm1-212ENSMUST00000113696 Adamts7Q68SA9 1657 aa29.37■■■□□ 2.29
Tpm1-212ENSMUST00000113696 Myom2Q14BI5 1463 aa29.35■■■□□ 2.29
Tpm1-212ENSMUST00000113696 Gm13697A2AK42 830 aa29.35■■■□□ 2.29
Tpm1-212ENSMUST00000113696 CltcQ68FD5 1675 aaKnown RBP29.35■■■□□ 2.29
Tpm1-212ENSMUST00000113696 Arhgap23Q69ZH9 1483 aa29.31■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Tarbp1E9Q368 1579 aa29.31■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Dot1lQ6XZL8 1540 aa29.3■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Ppip5k1A2ARP1 1436 aa29.3■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Rock1P70335 1354 aa29.3■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Stk24Q99KH8 431 aa29.29■■■□□ 2.28
Tpm1-212ENSMUST00000113696 ErbinQ80TH2 1402 aa29.29■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Las1lA2BE28 776 aaKnown RBP29.28■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Rgl3Q3UYI5 709 aa29.28■■■□□ 2.28
Tpm1-212ENSMUST00000113696 MyclP10166 368 aa29.27■■■□□ 2.28
Tpm1-212ENSMUST00000113696 Knl1Q66JQ7 1612 aa29.26■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Tecpr2Q3UH45 1423 aa29.25■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Iqgap3F8VQ29 1632 aa29.25■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Akap12Q9WTQ5 1684 aa29.24■■■□□ 2.27
Tpm1-212ENSMUST00000113696 RictorQ6QI06 1708 aa29.24■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Washc2Q6PGL7 1334 aa29.21■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Mroh3A0A1D5RM54 893 aa29.21■■■□□ 2.27
Tpm1-212ENSMUST00000113696 Med14A2ABV5 1459 aaKnown RBP29.2■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Sall3Q62255 1320 aa29.2■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Ino80Q6ZPV2 1559 aa29.19■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Skint5A7XUY5 1461 aa29.18■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Neurod1Q60867 357 aa29.16■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Efcab6Q6P1E8 1516 aa29.15■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Abcc6Q9R1S7 1498 aa29.14■■■□□ 2.26
Tpm1-212ENSMUST00000113696 Adgrb3Q80ZF8 1522 aa29.12■■■□□ 2.25
Tpm1-212ENSMUST00000113696 AatkQ80YE4 1365 aa29.12■■■□□ 2.25
Tpm1-212ENSMUST00000113696 Ahdc1Q6PAL7 1594 aaKnown RBP29.12■■■□□ 2.25
Tpm1-212ENSMUST00000113696 Abca8aQ8K442 1620 aa29.09■■■□□ 2.25
Tpm1-212ENSMUST00000113696 Uggt1Q6P5E4 1551 aa29.09■■■□□ 2.25
Tpm1-212ENSMUST00000113696 Dip2bQ3UH60 1574 aa29.06■■■□□ 2.24
Tpm1-212ENSMUST00000113696 Ercc6l2Q9JIM3 1537 aa29.06■■■□□ 2.24
Tpm1-212ENSMUST00000113696 Grwd1Q810D6 446 aaKnown RBP29.05■■■□□ 2.24
Tpm1-212ENSMUST00000113696 4930407I10RikD3Z5T8 1512 aa29.04■■■□□ 2.24
Tpm1-212ENSMUST00000113696 Ifit1bl1D3Z6F0 470 aa29.02■■■□□ 2.24
Tpm1-212ENSMUST00000113696 Bcl9Q9D219 1425 aa29.01■■■□□ 2.23
Tpm1-212ENSMUST00000113696 PtprmP28828 1452 aa28.99■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Mroh1E0CZ22 1640 aa28.97■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Adamts13Q769J6 1426 aa28.97■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Prrc2bQ7TPM1 1486 aaKnown RBP28.97■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Naip7Q9JIB3 1402 aa28.97■■■□□ 2.23
Tpm1-212ENSMUST00000113696 Polr3aB2RXC6 1390 aa28.96■■■□□ 2.23
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms