RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Mbd5B1AYB6 1498 aa22.3■■□□□ 1.16
Trim50-201ENSMUST00000065785 Kif14L0N7N1 1674 aaKnown RBP22.29■■□□□ 1.16
Trim50-201ENSMUST00000065785 Prdm16A2A935 1275 aa22.29■■□□□ 1.16
Trim50-201ENSMUST00000065785 Ncoa1P70365 1447 aa22.27■■□□□ 1.16
Trim50-201ENSMUST00000065785 Sin3aQ60520 1274 aaKnown RBP22.27■■□□□ 1.15
Trim50-201ENSMUST00000065785 Rrp7aQ9D1C9 280 aaKnown RBP22.26■■□□□ 1.15
Trim50-201ENSMUST00000065785 Cdc42bpbQ7TT50 1713 aa22.23■■□□□ 1.15
Trim50-201ENSMUST00000065785 Kiaa0556Q8C753 1610 aa22.23■■□□□ 1.15
Trim50-201ENSMUST00000065785 Fndc1E9Q043 1732 aa22.21■■□□□ 1.15
Trim50-201ENSMUST00000065785 Rock1P70335 1354 aa22.21■■□□□ 1.15
Trim50-201ENSMUST00000065785 Mapk8ip2Q9ERE9 830 aa22.2■■□□□ 1.14
Trim50-201ENSMUST00000065785 Asxl1P59598 1514 aa22.19■■□□□ 1.14
Trim50-201ENSMUST00000065785 Smg6P61406 1418 aaKnown RBP22.18■■□□□ 1.14
Trim50-201ENSMUST00000065785 Dot1lQ6XZL8 1540 aa22.18■■□□□ 1.14
Trim50-201ENSMUST00000065785 Cpsf1Q9EPU4 1441 aaKnown RBP22.17■■□□□ 1.14
Trim50-201ENSMUST00000065785 Mug2P28666 1451 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Stra8P70278 393 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Rgl3Q3UYI5 709 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Cwc22Q8C5N3 908 aaKnown RBP22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Myom3A2ABU4 1439 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Dapk1Q80YE7 1442 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Robo2Q7TPD3 1470 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Ppip5k1A2ARP1 1436 aa22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Cd109Q8R422 1442 aa22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Spag9Q58A65 1321 aaKnown RBP22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Cul9Q80TT8 1865 aa22.13■■□□□ 1.13
Trim50-201ENSMUST00000065785 Lemd3Q9WU40 921 aa22.13■■□□□ 1.13
Trim50-201ENSMUST00000065785 Kdm5cP41230 1554 aa22.12■■□□□ 1.13
Trim50-201ENSMUST00000065785 OvosQ3UU35 1456 aa22.11■■□□□ 1.13
Trim50-201ENSMUST00000065785 Polr3aB2RXC6 1390 aa22.11■■□□□ 1.13
Trim50-201ENSMUST00000065785 Naip6Q9JIB6 1403 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Iqgap1Q9JKF1 1657 aaKnown RBP22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Abca17E9PX95 1733 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Atp7aQ64430 1491 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Hecw2Q6I6G8 1578 aa22.09■■□□□ 1.13
Trim50-201ENSMUST00000065785 RalgapbQ8BQZ4 1484 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Plekhg5Q66T02 1073 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Hdac5Q9Z2V6 1113 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Synj2Q9D2G5 1434 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Atp10aO54827 1508 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Rundc1Q0VDN7 615 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Pde4cQ3UEI1 686 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Usp54Q8BL06 1588 aaKnown RBP22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Map3k5O35099 1380 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 ShprhQ7TPQ3 1674 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Nsd2Q8BVE8 1365 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Kif1bQ60575 1816 aaKnown RBP22.02■■□□□ 1.12
Trim50-201ENSMUST00000065785 Cdk13Q69ZA1 1511 aaKnown RBP22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Card11Q8CIS0 1159 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Tarbp1E9Q368 1579 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Nos1Q9Z0J4 1429 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Rock2P70336 1388 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Washc2Q6PGL7 1334 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Ptch1Q61115 1434 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Dip2cE9PWR4 1557 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 RereQ80TZ9 1558 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Xrn1P97789 1719 aaKnown RBP22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Gm13695A2AK44 830 aa21.99■■□□□ 1.11
Trim50-201ENSMUST00000065785 Tnnt3Q9QZ47 272 aa21.99■■□□□ 1.11
Trim50-201ENSMUST00000065785 Edc4Q3UJB9 1406 aaKnown RBP21.97■■□□□ 1.11
Trim50-201ENSMUST00000065785 Grwd1Q810D6 446 aaKnown RBP21.95■■□□□ 1.1
Trim50-201ENSMUST00000065785 Zbtb7cQ8VCZ7 619 aa21.95■■□□□ 1.1
Trim50-201ENSMUST00000065785 Dnajc5gQ8C632 165 aa21.93■■□□□ 1.1
Trim50-201ENSMUST00000065785 Ylpm1Q9R0I7 1386 aaKnown RBP21.93■■□□□ 1.1
Trim50-201ENSMUST00000065785 Znf710Q3U288 666 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Yeats2Q3TUF7 1407 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Znf518aB2RRF6 1478 aaKnown RBP21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Qser1A2BIE1 1698 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Adamts13Q769J6 1426 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Myo5cE9Q1F5 1742 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Cdc42bpgQ80UW5 1551 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Hnrnpul2Q00PI9 745 aaKnown RBP21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Csrnp3P59055 597 aa21.88■■□□□ 1.09
Trim50-201ENSMUST00000065785 Setd1aE9PYH6 1716 aa21.87■■□□□ 1.09
Trim50-201ENSMUST00000065785 Zmym4A2A791 1549 aaKnown RBP21.87■■□□□ 1.09
Trim50-201ENSMUST00000065785 Plch2A2AP18 1501 aa21.86■■□□□ 1.09
Trim50-201ENSMUST00000065785 Trpm1Q2TV84 1622 aa21.85■■□□□ 1.09
Trim50-201ENSMUST00000065785 Tmem131lQ3U3D7 1597 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Topbp1Q6ZQF0 1515 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 AnkarA2RT91 1465 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Cfap65Q3V0B4 1847 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Kif3bQ61771 747 aa21.83■■□□□ 1.09
Trim50-201ENSMUST00000065785 Uggt2E9Q4X2 1504 aa21.82■■□□□ 1.08
Trim50-201ENSMUST00000065785 Tulp4Q9JIL5 1547 aa21.81■■□□□ 1.08
Trim50-201ENSMUST00000065785 Mroh3A0A1D5RM54 893 aa21.8■■□□□ 1.08
Trim50-201ENSMUST00000065785 Gli2Q0VGT2 1544 aa21.79■■□□□ 1.08
Trim50-201ENSMUST00000065785 Adamtsl3G3UXC7 1706 aa21.79■■□□□ 1.08
Trim50-201ENSMUST00000065785 NpatQ8BMA5 1420 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Ifit1bl1D3Z6F0 470 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Abcc6Q9R1S7 1498 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Ttc21bQ0HA38 1315 aa21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 PnisrA2AJT4 805 aaKnown RBP21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 Mrs2Q5NCE8 434 aa21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 Abca6Q8K441 1624 aa21.76■■□□□ 1.07
Trim50-201ENSMUST00000065785 Alpk3Q924C5 1678 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Aplp2Q06335 707 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Exoc6Q8R313 802 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Iqgap3F8VQ29 1632 aa21.73■■□□□ 1.07
Trim50-201ENSMUST00000065785 Slc4a2P13808 1237 aaKnown RBP21.73■■□□□ 1.07
Trim50-201ENSMUST00000065785 Plppr3Q7TPB0 716 aa21.73■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 19.4 ms