RNA–Protein interactions for RNA: ENSMUST00000065785.3

Trim50-201, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim50, Length 1,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-201ENSMUST00000065785 Mbd5B1AYB6 1498 aa22.3■■□□□ 1.16
Trim50-201ENSMUST00000065785 Kif14L0N7N1 1674 aaKnown RBP22.29■■□□□ 1.16
Trim50-201ENSMUST00000065785 Prdm16A2A935 1275 aa22.29■■□□□ 1.16
Trim50-201ENSMUST00000065785 Ncoa1P70365 1447 aa22.27■■□□□ 1.16
Trim50-201ENSMUST00000065785 Sin3aQ60520 1274 aaKnown RBP22.27■■□□□ 1.15
Trim50-201ENSMUST00000065785 Rrp7aQ9D1C9 280 aaKnown RBP22.26■■□□□ 1.15
Trim50-201ENSMUST00000065785 Cdc42bpbQ7TT50 1713 aa22.23■■□□□ 1.15
Trim50-201ENSMUST00000065785 Kiaa0556Q8C753 1610 aa22.23■■□□□ 1.15
Trim50-201ENSMUST00000065785 Fndc1E9Q043 1732 aa22.21■■□□□ 1.15
Trim50-201ENSMUST00000065785 Rock1P70335 1354 aa22.21■■□□□ 1.15
Trim50-201ENSMUST00000065785 Mapk8ip2Q9ERE9 830 aa22.2■■□□□ 1.14
Trim50-201ENSMUST00000065785 Asxl1P59598 1514 aa22.19■■□□□ 1.14
Trim50-201ENSMUST00000065785 Smg6P61406 1418 aaKnown RBP22.18■■□□□ 1.14
Trim50-201ENSMUST00000065785 Dot1lQ6XZL8 1540 aa22.18■■□□□ 1.14
Trim50-201ENSMUST00000065785 Cpsf1Q9EPU4 1441 aaKnown RBP22.17■■□□□ 1.14
Trim50-201ENSMUST00000065785 Mug2P28666 1451 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Stra8P70278 393 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Rgl3Q3UYI5 709 aa22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Cwc22Q8C5N3 908 aaKnown RBP22.16■■□□□ 1.14
Trim50-201ENSMUST00000065785 Myom3A2ABU4 1439 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Dapk1Q80YE7 1442 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Robo2Q7TPD3 1470 aa22.15■■□□□ 1.14
Trim50-201ENSMUST00000065785 Ppip5k1A2ARP1 1436 aa22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Cd109Q8R422 1442 aa22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Spag9Q58A65 1321 aaKnown RBP22.14■■□□□ 1.13
Trim50-201ENSMUST00000065785 Cul9Q80TT8 1865 aa22.13■■□□□ 1.13
Trim50-201ENSMUST00000065785 Lemd3Q9WU40 921 aa22.13■■□□□ 1.13
Trim50-201ENSMUST00000065785 Kdm5cP41230 1554 aa22.12■■□□□ 1.13
Trim50-201ENSMUST00000065785 OvosQ3UU35 1456 aa22.11■■□□□ 1.13
Trim50-201ENSMUST00000065785 Polr3aB2RXC6 1390 aa22.11■■□□□ 1.13
Trim50-201ENSMUST00000065785 Naip6Q9JIB6 1403 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Iqgap1Q9JKF1 1657 aaKnown RBP22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Abca17E9PX95 1733 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Atp7aQ64430 1491 aa22.1■■□□□ 1.13
Trim50-201ENSMUST00000065785 Hecw2Q6I6G8 1578 aa22.09■■□□□ 1.13
Trim50-201ENSMUST00000065785 RalgapbQ8BQZ4 1484 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Plekhg5Q66T02 1073 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Hdac5Q9Z2V6 1113 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Synj2Q9D2G5 1434 aa22.07■■□□□ 1.12
Trim50-201ENSMUST00000065785 Atp10aO54827 1508 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Rundc1Q0VDN7 615 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Pde4cQ3UEI1 686 aa22.04■■□□□ 1.12
Trim50-201ENSMUST00000065785 Usp54Q8BL06 1588 aaKnown RBP22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Map3k5O35099 1380 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 ShprhQ7TPQ3 1674 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Nsd2Q8BVE8 1365 aa22.03■■□□□ 1.12
Trim50-201ENSMUST00000065785 Kif1bQ60575 1816 aaKnown RBP22.02■■□□□ 1.12
Trim50-201ENSMUST00000065785 Cdk13Q69ZA1 1511 aaKnown RBP22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Card11Q8CIS0 1159 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Tarbp1E9Q368 1579 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Nos1Q9Z0J4 1429 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Rock2P70336 1388 aa22.01■■□□□ 1.11
Trim50-201ENSMUST00000065785 Washc2Q6PGL7 1334 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Ptch1Q61115 1434 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Dip2cE9PWR4 1557 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 RereQ80TZ9 1558 aa22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Xrn1P97789 1719 aaKnown RBP22■■□□□ 1.11
Trim50-201ENSMUST00000065785 Gm13695A2AK44 830 aa21.99■■□□□ 1.11
Trim50-201ENSMUST00000065785 Tnnt3Q9QZ47 272 aa21.99■■□□□ 1.11
Trim50-201ENSMUST00000065785 Edc4Q3UJB9 1406 aaKnown RBP21.97■■□□□ 1.11
Trim50-201ENSMUST00000065785 Grwd1Q810D6 446 aaKnown RBP21.95■■□□□ 1.1
Trim50-201ENSMUST00000065785 Zbtb7cQ8VCZ7 619 aa21.95■■□□□ 1.1
Trim50-201ENSMUST00000065785 Dnajc5gQ8C632 165 aa21.93■■□□□ 1.1
Trim50-201ENSMUST00000065785 Ylpm1Q9R0I7 1386 aaKnown RBP21.93■■□□□ 1.1
Trim50-201ENSMUST00000065785 Znf710Q3U288 666 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Yeats2Q3TUF7 1407 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Znf518aB2RRF6 1478 aaKnown RBP21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Qser1A2BIE1 1698 aa21.92■■□□□ 1.1
Trim50-201ENSMUST00000065785 Adamts13Q769J6 1426 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Myo5cE9Q1F5 1742 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Cdc42bpgQ80UW5 1551 aa21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Hnrnpul2Q00PI9 745 aaKnown RBP21.9■■□□□ 1.1
Trim50-201ENSMUST00000065785 Csrnp3P59055 597 aa21.88■■□□□ 1.09
Trim50-201ENSMUST00000065785 Setd1aE9PYH6 1716 aa21.87■■□□□ 1.09
Trim50-201ENSMUST00000065785 Zmym4A2A791 1549 aaKnown RBP21.87■■□□□ 1.09
Trim50-201ENSMUST00000065785 Plch2A2AP18 1501 aa21.86■■□□□ 1.09
Trim50-201ENSMUST00000065785 Trpm1Q2TV84 1622 aa21.85■■□□□ 1.09
Trim50-201ENSMUST00000065785 Tmem131lQ3U3D7 1597 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Topbp1Q6ZQF0 1515 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 AnkarA2RT91 1465 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Cfap65Q3V0B4 1847 aa21.84■■□□□ 1.09
Trim50-201ENSMUST00000065785 Kif3bQ61771 747 aa21.83■■□□□ 1.09
Trim50-201ENSMUST00000065785 Uggt2E9Q4X2 1504 aa21.82■■□□□ 1.08
Trim50-201ENSMUST00000065785 Tulp4Q9JIL5 1547 aa21.81■■□□□ 1.08
Trim50-201ENSMUST00000065785 Mroh3A0A1D5RM54 893 aa21.8■■□□□ 1.08
Trim50-201ENSMUST00000065785 Gli2Q0VGT2 1544 aa21.79■■□□□ 1.08
Trim50-201ENSMUST00000065785 Adamtsl3G3UXC7 1706 aa21.79■■□□□ 1.08
Trim50-201ENSMUST00000065785 NpatQ8BMA5 1420 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Ifit1bl1D3Z6F0 470 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Abcc6Q9R1S7 1498 aa21.78■■□□□ 1.08
Trim50-201ENSMUST00000065785 Ttc21bQ0HA38 1315 aa21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 PnisrA2AJT4 805 aaKnown RBP21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 Mrs2Q5NCE8 434 aa21.77■■□□□ 1.08
Trim50-201ENSMUST00000065785 Abca6Q8K441 1624 aa21.76■■□□□ 1.07
Trim50-201ENSMUST00000065785 Alpk3Q924C5 1678 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Aplp2Q06335 707 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Exoc6Q8R313 802 aa21.75■■□□□ 1.07
Trim50-201ENSMUST00000065785 Iqgap3F8VQ29 1632 aa21.73■■□□□ 1.07
Trim50-201ENSMUST00000065785 Slc4a2P13808 1237 aaKnown RBP21.73■■□□□ 1.07
Trim50-201ENSMUST00000065785 Plppr3Q7TPB0 716 aa21.73■■□□□ 1.07
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms