RNA–Protein interactions for RNA: ENSMUST00000062606.7

Upk3b-201, Transcript of Uroplakin-3b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upk3b, Length 3,530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3b-201ENSMUST00000062606 Vps8Q0P5W1 1427 aa17.26■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Eif5bQ05D44 1216 aaKnown RBP17.26■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Fkbp15Q6P9Q6 1216 aaKnown RBP17.26■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Lamc1P02468 1607 aaKnown RBP17.25■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Nop58Q6DFW4 536 aaKnown RBP17.25■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Prdm16A2A935 1275 aa17.23■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Lmod2Q3UHZ5 550 aa17.23■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Adamtsl3G3UXC7 1706 aa17.23■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Scaf1Q5U4C3 1256 aaKnown RBP17.22■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Znf518aB2RRF6 1478 aaKnown RBP17.21■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Ppp1r18Q8BQ30 594 aa17.21■□□□□ 0.35
Upk3b-201ENSMUST00000062606 Mtus2Q3UHD3 1353 aa17.2■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Dennd4bQ3U1Y4 1499 aa17.2■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Wdr66E9Q743 1299 aa17.19■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Arid3cA6PWV5 409 aa17.19■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Robo2Q7TPD3 1470 aa17.19■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Alpk3Q924C5 1678 aa17.19■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Myo5cE9Q1F5 1742 aa17.18■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Talpid3E9PV87 1520 aa17.17■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Qser1A2BIE1 1698 aa17.16■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Aebp2Q9Z248 504 aaKnown RBP17.16■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Adgrb2Q8CGM1 1561 aa17.15■□□□□ 0.34
Upk3b-201ENSMUST00000062606 ShprhQ7TPQ3 1674 aa17.15■□□□□ 0.34
Upk3b-201ENSMUST00000062606 Tmem131lQ3U3D7 1597 aa17.14■□□□□ 0.33
Upk3b-201ENSMUST00000062606 AlkP97793 1621 aa17.14■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Adamts7Q68SA9 1657 aa17.13■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Lemd3Q9WU40 921 aa17.12■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Rtl5Q5DTT4 599 aa17.11■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Akap12Q9WTQ5 1684 aa17.11■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Usp54Q8BL06 1588 aaKnown RBP17.11■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Kif1bQ60575 1816 aaKnown RBP17.1■□□□□ 0.33
Upk3b-201ENSMUST00000062606 SafbD3YXK2 937 aaKnown RBP17.09■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Pcdh10E9PXQ7 1057 aa17.09■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Znf316Q6PGE4 1016 aa17.09■□□□□ 0.33
Upk3b-201ENSMUST00000062606 RictorQ6QI06 1708 aa17.09■□□□□ 0.33
Upk3b-201ENSMUST00000062606 ClspnQ80YR7 1315 aa17.08■□□□□ 0.33
Upk3b-201ENSMUST00000062606 Kdm5aQ3UXZ9 1690 aa17.08■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Sart1Q9Z315 806 aaKnown RBP17.08■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Ssh2Q5SW75 1423 aa17.07■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Ptch1Q61115 1434 aa17.06■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Gli2Q0VGT2 1544 aa17.06■□□□□ 0.32
Upk3b-201ENSMUST00000062606 NpatQ8BMA5 1420 aa17.06■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Ube2uB1AUC4 352 aa17.05■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Prdm2A2A7B5 1709 aaKnown RBP17.04■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Naip6Q9JIB6 1403 aa17.03■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Yeats2Q3TUF7 1407 aa17.03■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Knl1Q66JQ7 1612 aa17.02■□□□□ 0.32
Upk3b-201ENSMUST00000062606 Arhgap23Q69ZH9 1483 aa17.01■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Prex1Q69ZK0 1650 aa17■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Cabp1Q9JLK7 227 aa17■□□□□ 0.31
Upk3b-201ENSMUST00000062606 PtprgQ05909 1442 aa16.99■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Abca6Q8K441 1624 aa16.99■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Supt6hQ62383 1726 aaKnown RBP16.99■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Ccer2J3QPU5 274 aa16.98■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Ankrd36D3Z4K0 1415 aa16.98■□□□□ 0.31
Upk3b-201ENSMUST00000062606 DroshaQ5HZJ0 1373 aaKnown RBP16.98■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Tarbp1E9Q368 1579 aa16.97■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Ipo4Q8VI75 1082 aa16.97■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Tecpr2Q3UH45 1423 aa16.96■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Irx3P81067 507 aa16.96■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Asxl1P59598 1514 aa16.96■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Rsph4aQ8BYM7 716 aa16.96■□□□□ 0.31
Upk3b-201ENSMUST00000062606 Ino80Q6ZPV2 1559 aa16.96■□□□□ 0.31
Upk3b-201ENSMUST00000062606 AnkarA2RT91 1465 aa16.95■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Uggt1Q6P5E4 1551 aa16.95■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Myom2Q14BI5 1463 aa16.95■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Med14A2ABV5 1459 aaKnown RBP16.94■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Dip2bQ3UH60 1574 aa16.92■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Upf2A2AT37 1269 aaKnown RBP16.92■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Ppargc1bQ8VHJ7 1014 aa16.92■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Bcl9Q9D219 1425 aa16.91■□□□□ 0.3
Upk3b-201ENSMUST00000062606 AampJ3QN89 436 aa16.91■□□□□ 0.3
Upk3b-201ENSMUST00000062606 NclP09405 707 aaKnown RBP16.91■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Naip5Q9R016 1403 aa16.9■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Spag9Q58A65 1321 aaKnown RBP16.9■□□□□ 0.3
Upk3b-201ENSMUST00000062606 ArxO35085 564 aa16.9■□□□□ 0.3
Upk3b-201ENSMUST00000062606 Cfap65Q3V0B4 1847 aa16.9■□□□□ 0.3
Upk3b-201ENSMUST00000062606 CltcQ68FD5 1675 aaKnown RBP16.89■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Map3k5O35099 1380 aa16.89■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Ppip5k1A2ARP1 1436 aa16.89■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Ylpm1Q9R0I7 1386 aaKnown RBP16.88■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Clstn2Q9ER65 966 aa16.88■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Iqgap3F8VQ29 1632 aa16.87■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Rtn4Q99P72 1162 aaKnown RBP16.87■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Abca8aQ8K442 1620 aa16.86■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Nsd2Q8BVE8 1365 aa16.84■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Anp32aO35381 247 aa16.84■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Taok2Q6ZQ29 1240 aa16.84■□□□□ 0.29
Upk3b-201ENSMUST00000062606 Nup155Q99P88 1391 aaKnown RBP16.83■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Lmtk3Q5XJV6 1424 aa16.83■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Rrp7aQ9D1C9 280 aaKnown RBP16.82■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Efcab6Q6P1E8 1516 aa16.82■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Ehbp1l1Q99MS7 1716 aa16.81■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Chd2E9PZM4 1827 aaKnown RBP16.8■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Hnrnpul2Q00PI9 745 aaKnown RBP16.8■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Myom3A2ABU4 1439 aa16.8■□□□□ 0.28
Upk3b-201ENSMUST00000062606 NgefQ8CHT1 710 aa16.79■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Abcc6Q9R1S7 1498 aa16.78■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Pik3c2gO70167 1506 aa16.78■□□□□ 0.28
Upk3b-201ENSMUST00000062606 Rbm10Q99KG3 930 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 67.8 ms