RNA–Protein interactions for RNA: ENSMUST00000056889.14

Chd4-201, Transcript of Chromodomain-helicase-DNA-binding protein 4, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Chd4, Length 6,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4-201ENSMUST00000056889 Dixdc1Q80Y83 711 aa18.18■□□□□ 0.5
Chd4-201ENSMUST00000056889 Pkd2O35245 966 aa18.18■□□□□ 0.5
Chd4-201ENSMUST00000056889 Mre11Q61216 706 aa18.17■□□□□ 0.5
Chd4-201ENSMUST00000056889 Ccdc34Q3UI66 367 aa18.17■□□□□ 0.5
Chd4-201ENSMUST00000056889 Slc4a10Q5DTL9 1118 aa18.17■□□□□ 0.5
Chd4-201ENSMUST00000056889 Eif2s2Q99L45 331 aaKnown RBP18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Gtf2e1Q9D0D5 440 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Mia2Q91ZV0 1396 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Casq1O09165 405 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Atp6v1dP57746 247 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Rbm10Q99KG3 930 aaKnown RBP18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Sox12Q04890 314 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Ggt6Q6PDE7 497 aa18.16■□□□□ 0.5
Chd4-201ENSMUST00000056889 Nap1l3Q794H2 544 aa18.15■□□□□ 0.5
Chd4-201ENSMUST00000056889 Eif4g2Q62448 906 aaKnown RBP18.15■□□□□ 0.5
Chd4-201ENSMUST00000056889 FosbP13346 338 aa18.14■□□□□ 0.5
Chd4-201ENSMUST00000056889 Sh3bgrQ9WUZ7 214 aa18.14■□□□□ 0.49
Chd4-201ENSMUST00000056889 Dnai2A2AC93 623 aa18.13■□□□□ 0.49
Chd4-201ENSMUST00000056889 St18Q80TY4 1045 aa18.13■□□□□ 0.49
Chd4-201ENSMUST00000056889 Hdgfl1Q2VPR5 283 aa18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Ccar1Q8CH18 1146 aaKnown RBP18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Kri1Q8VDQ9 704 aaKnown RBP18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Zfp777B9EKF4 885 aa18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Filip1lQ6P6L0 1131 aa18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Tpm1P58771 284 aa18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Tpm4Q6IRU2 248 aa18.12■□□□□ 0.49
Chd4-201ENSMUST00000056889 Cc2d1aQ8K1A6 943 aa18.1■□□□□ 0.49
Chd4-201ENSMUST00000056889 Tpm2P58774 284 aa18.09■□□□□ 0.49
Chd4-201ENSMUST00000056889 Map4P27546 1125 aaKnown RBP18.09■□□□□ 0.49
Chd4-201ENSMUST00000056889 Ralbp1Q62172 648 aa18.08■□□□□ 0.49
Chd4-201ENSMUST00000056889 Spag9Q58A65 1321 aaKnown RBP18.08■□□□□ 0.49
Chd4-201ENSMUST00000056889 Krt82Q99M74 516 aa18.08■□□□□ 0.49
Chd4-201ENSMUST00000056889 Ak7Q9D2H2 614 aa18.08■□□□□ 0.49
Chd4-201ENSMUST00000056889 Kif4P33174 1231 aa18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 Fnbp4Q6ZQ03 1031 aa18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 Gripap1Q8VD04 806 aa18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 Gm21969J3QJZ1 289 aa18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 Anp32eP97822 260 aaKnown RBP18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 Zrsr2Q62377 462 aaKnown RBP18.08■□□□□ 0.48
Chd4-201ENSMUST00000056889 BbxQ8VBW5 907 aa18.07■□□□□ 0.48
Chd4-201ENSMUST00000056889 CntlnA2AM05 1397 aa18.06■□□□□ 0.48
Chd4-201ENSMUST00000056889 Bicd2Q921C5 820 aa18.06■□□□□ 0.48
Chd4-201ENSMUST00000056889 Znhit6Q3UFB2 460 aaKnown RBP18.06■□□□□ 0.48
Chd4-201ENSMUST00000056889 Rufy1Q8BIJ7 712 aa18.06■□□□□ 0.48
Chd4-201ENSMUST00000056889 Ccdc47Q9D024 483 aaKnown RBP18.05■□□□□ 0.48
Chd4-201ENSMUST00000056889 Pdcl3Q8BVF2 240 aa18.04■□□□□ 0.48
Chd4-201ENSMUST00000056889 Rock2P70336 1388 aa18.04■□□□□ 0.48
Chd4-201ENSMUST00000056889 Phactr2B1AVP0 632 aa18.04■□□□□ 0.48
Chd4-201ENSMUST00000056889 Kif15Q6P9L6 1387 aa18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Dusp9Q7TNL7 452 aa18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Nol12Q8BG17 217 aa18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Rnf214Q8BFU3 668 aaKnown RBP18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Abcc8B2RUS7 1588 aa18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Trak1Q6PD31 939 aa18.03■□□□□ 0.48
Chd4-201ENSMUST00000056889 Hnrnpul1Q8VDM6 859 aaKnown RBP18.02■□□□□ 0.47
Chd4-201ENSMUST00000056889 Znf704Q9ERQ3 566 aa18.01■□□□□ 0.47
Chd4-201ENSMUST00000056889 AppP12023 770 aa18■□□□□ 0.47
Chd4-201ENSMUST00000056889 Rec8Q8C5S7 591 aa18■□□□□ 0.47
Chd4-201ENSMUST00000056889 Mphosph9A6H5Y1 991 aa18■□□□□ 0.47
Chd4-201ENSMUST00000056889 Mad1l1Q9WTX8 717 aaKnown RBP18■□□□□ 0.47
Chd4-201ENSMUST00000056889 PogkQ80TC5 607 aa18■□□□□ 0.47
Chd4-201ENSMUST00000056889 Mex3cQ05A36 652 aaKnown RBP17.99■□□□□ 0.47
Chd4-201ENSMUST00000056889 Ccdc60Q8C4J0 545 aa17.99■□□□□ 0.47
Chd4-201ENSMUST00000056889 Ccdc43Q9CR29 222 aaKnown RBP17.98■□□□□ 0.47
Chd4-201ENSMUST00000056889 TimelessQ9R1X4 1197 aa17.98■□□□□ 0.47
Chd4-201ENSMUST00000056889 Golga3P55937 1487 aa17.96■□□□□ 0.47
Chd4-201ENSMUST00000056889 Gcom1E9PZ54 550 aa17.96■□□□□ 0.47
Chd4-201ENSMUST00000056889 MyzapQ3UIJ9 466 aa17.96■□□□□ 0.47
Chd4-201ENSMUST00000056889 Nap1l1P28656 391 aaKnown RBP17.96■□□□□ 0.46
Chd4-201ENSMUST00000056889 Cgnl1Q6AW69 1298 aa17.95■□□□□ 0.46
Chd4-201ENSMUST00000056889 Ipo7Q9EPL8 1038 aaKnown RBP17.95■□□□□ 0.46
Chd4-201ENSMUST00000056889 KinQ8K339 391 aa17.95■□□□□ 0.46
Chd4-201ENSMUST00000056889 Glipr1l2Q9CQ35 332 aa17.95■□□□□ 0.46
Chd4-201ENSMUST00000056889 Tsen2Q6P7W5 460 aa17.94■□□□□ 0.46
Chd4-201ENSMUST00000056889 Srek1Q8BZX4 494 aaKnown RBP17.94■□□□□ 0.46
Chd4-201ENSMUST00000056889 Cwc15Q9JHS9 229 aaKnown RBP17.93■□□□□ 0.46
Chd4-201ENSMUST00000056889 Znf692Q3U381 531 aa17.93■□□□□ 0.46
Chd4-201ENSMUST00000056889 Odf2A3KGV1 830 aaKnown RBP17.93■□□□□ 0.46
Chd4-201ENSMUST00000056889 Psme1P97371 249 aa17.93■□□□□ 0.46
Chd4-201ENSMUST00000056889 Stk11ipQ3TAA7 1072 aa17.93■□□□□ 0.46
Chd4-201ENSMUST00000056889 Rsf1E9PWW9 1441 aaKnown RBP17.92■□□□□ 0.46
Chd4-201ENSMUST00000056889 Paf1Q8K2T8 535 aa17.92■□□□□ 0.46
Chd4-201ENSMUST00000056889 Tceal9Q9DD24 104 aa17.92■□□□□ 0.46
Chd4-201ENSMUST00000056889 Rabep1O35551 862 aa17.92■□□□□ 0.46
Chd4-201ENSMUST00000056889 Smc3Q9CW03 1217 aaKnown RBP17.91■□□□□ 0.46
Chd4-201ENSMUST00000056889 Cplx1P63040 134 aa17.91■□□□□ 0.46
Chd4-201ENSMUST00000056889 Hmgn5Q9JL35 406 aa17.91■□□□□ 0.46
Chd4-201ENSMUST00000056889 Triml2E9PW10 424 aa17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Pank3Q8R2W9 370 aa17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Sycp1Q62209 993 aa17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Usp48Q3V0C5 1052 aa17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Hook1Q8BIL5 728 aa17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Smg6P61406 1418 aaKnown RBP17.9■□□□□ 0.46
Chd4-201ENSMUST00000056889 Ppm1fQ8CGA0 452 aa17.89■□□□□ 0.45
Chd4-201ENSMUST00000056889 KarsQ99MN1 595 aaKnown RBP17.88■□□□□ 0.45
Chd4-201ENSMUST00000056889 Mrvi1Q9WUX5 899 aaKnown RBP17.88■□□□□ 0.45
Chd4-201ENSMUST00000056889 Ccdc18Q640L5 1455 aa17.88■□□□□ 0.45
Chd4-201ENSMUST00000056889 Babam1Q3UI43 333 aa17.87■□□□□ 0.45
Chd4-201ENSMUST00000056889 Mns1Q61884 491 aa17.87■□□□□ 0.45
Chd4-201ENSMUST00000056889 Znf526Q8BI66 675 aa17.87■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms