RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Abca8bQ8K440 1620 aa25.74■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Myom3A2ABU4 1439 aa25.74■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Adgrb2Q8CGM1 1561 aa25.73■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Ttbk1Q6PCN3 1308 aa25.73■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Mug2P28666 1451 aa25.73■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Rock2P70336 1388 aa25.72■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Ofd1Q80Z25 1017 aa25.71■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Liat1Q810M6 228 aa25.71■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 Fam208aQ69ZR9 1610 aaKnown RBP25.71■■□□□ 1.71
Ccdc50-201ENSMUST00000039443 P3h3Q8CG70 732 aa25.69■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Arid3cA6PWV5 409 aa25.68■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Rundc1Q0VDN7 615 aa25.68■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Supt6hQ62383 1726 aaKnown RBP25.67■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Trpm2Q91YD4 1506 aa25.67■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Dhx9O70133 1380 aaKnown RBP25.66■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Card11Q8CIS0 1159 aa25.65■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Clasp1Q80TV8 1535 aaKnown RBP25.65■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Rgl3Q3UYI5 709 aa25.65■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 RalgapbQ8BQZ4 1484 aa25.64■■□□□ 1.7
Ccdc50-201ENSMUST00000039443 Cpsf1Q9EPU4 1441 aaKnown RBP25.62■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Ttll5Q8CHB8 1328 aa25.62■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Tcerg1Q8CGF7 1100 aaKnown RBP25.6■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Mlh3A0A1Y7VMP7 1443 aa25.6■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Pak3Q61036 559 aa25.59■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Ppp1r18Q8BQ30 594 aa25.58■■□□□ 1.69
Ccdc50-201ENSMUST00000039443 Mink1Q9JM52 1308 aa25.58■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Caskin1Q6P9K8 1431 aa25.57■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Rnf17Q99MV7 1640 aa25.57■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Nup155Q99P88 1391 aaKnown RBP25.55■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Upf2A2AT37 1269 aaKnown RBP25.55■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Trak1Q6PD31 939 aa25.55■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Egfem1Q8C088 590 aa25.55■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 L3mbtl2P59178 703 aa25.54■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Asxl1P59598 1514 aa25.53■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Kank1E9Q238 1360 aa25.53■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Zfyve16Q80U44 1528 aa25.52■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Ttc37F8VPK0 1563 aa25.52■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Polr3aB2RXC6 1390 aa25.52■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Cdk13Q69ZA1 1511 aaKnown RBP25.52■■□□□ 1.68
Ccdc50-201ENSMUST00000039443 Ipo9Q91YE6 1041 aa25.51■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Anp32bQ9EST5 272 aaKnown RBP25.51■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Iqgap1Q9JKF1 1657 aaKnown RBP25.51■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Ccdc27Q3V036 639 aa25.51■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Fmn2Q9JL04 1578 aa25.5■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Arhgap5P97393 1501 aa25.49■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Setd1aE9PYH6 1716 aa25.49■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Zmym4A2A791 1549 aaKnown RBP25.49■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Rock1P70335 1354 aa25.48■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Depdc5P61460 1591 aa25.46■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 AglF8VPN4 1532 aa25.46■■□□□ 1.67
Ccdc50-201ENSMUST00000039443 Tdrd9Q14BI7 1383 aa25.44■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Dot1lQ6XZL8 1540 aa25.43■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Adgrl2Q8JZZ7 1487 aa25.42■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 PtprgQ05909 1442 aa25.41■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Pdcd11Q6NS46 1862 aaKnown RBP25.41■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Cfap74Q3UY96 1578 aa25.41■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Map4P27546 1125 aaKnown RBP25.41■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Gm32742A0A1B0GT42 1604 aa25.4■■□□□ 1.66
Ccdc50-201ENSMUST00000039443 Tubgcp6G5E8P0 1769 aa25.39■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Abca9Q8K449 1623 aa25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Zscan21Q07231 555 aa25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Grwd1Q810D6 446 aaKnown RBP25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Clstn2Q9ER65 966 aa25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 AdgbG3UZ78 1657 aa25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Ccdc9Q8VC31 543 aaKnown RBP25.38■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Slc4a3P16283 1227 aa25.37■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Kdm5cP41230 1554 aa25.36■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Mak16Q8BGS0 296 aaKnown RBP25.36■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 NeflP08551 543 aa25.35■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 TnikP83510 1323 aa25.35■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Abcc3B2RX12 1523 aa25.34■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Prkrip1Q9CWV6 186 aaKnown RBP25.33■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Trappc8E9PWG2 1437 aa25.33■■□□□ 1.65
Ccdc50-201ENSMUST00000039443 Rpgrip1lQ8CG73 1264 aa25.32■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Erbb3Q61526 1339 aa25.3■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Kidins220E9Q9B7 1793 aa25.3■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Arid4bA2CG63 1314 aaKnown RBP25.29■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Kcnh8P59111 1102 aa25.28■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Zfp444Q3TDV8 331 aaKnown RBP25.28■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Neurl4Q5NCX5 1563 aa25.27■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Pcdh10E9PXQ7 1057 aa25.27■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Mast1Q9R1L5 1570 aa25.27■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Ppip5k1A2ARP1 1436 aa25.27■■□□□ 1.64
Ccdc50-201ENSMUST00000039443 Mbd3Q9Z2D8 285 aaKnown RBP25.24■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Sart1Q9Z315 806 aaKnown RBP25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Hecw1Q8K4P8 1604 aa25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Tarbp1E9Q368 1579 aa25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Ssh2Q5SW75 1423 aa25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Lemd3Q9WU40 921 aa25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Kiaa0556Q8C753 1610 aa25.21■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Ttc41Q692V3 1318 aa25.2■■□□□ 1.63
Ccdc50-201ENSMUST00000039443 Plch2A2AP18 1501 aa25.2■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Fndc1E9Q043 1732 aa25.2■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Cd109Q8R422 1442 aa25.18■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Hdac5Q9Z2V6 1113 aa25.17■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 OvosQ3UU35 1456 aa25.16■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Cdc42bpbQ7TT50 1713 aa25.16■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Atp7aQ64430 1491 aa25.15■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Tex14Q7M6U3 1450 aa25.15■■□□□ 1.62
Ccdc50-201ENSMUST00000039443 Hsp90aa1P07901 733 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 22,080 RNA–protein pairs in 18 ms