RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Fam135aQ6NS59 1506 aa13.77□□□□□ -0.21
Limch1-201ENSMUST00000038188 Nsd2Q8BVE8 1365 aa13.76□□□□□ -0.21
Limch1-201ENSMUST00000038188 Dnajc5P60904 198 aa13.76□□□□□ -0.21
Limch1-201ENSMUST00000038188 HnrnpmQ9D0E1 729 aaKnown RBP13.76□□□□□ -0.21
Limch1-201ENSMUST00000038188 UacaQ8CGB3 1411 aa13.76□□□□□ -0.21
Limch1-201ENSMUST00000038188 Zranb3Q6NZP1 1069 aa13.75□□□□□ -0.21
Limch1-201ENSMUST00000038188 Gm10471E9Q1C7 252 aa13.75□□□□□ -0.21
Limch1-201ENSMUST00000038188 OvosQ3UU35 1456 aa13.74□□□□□ -0.21
Limch1-201ENSMUST00000038188 Atp2b2Q9R0K7 1198 aa13.74□□□□□ -0.21
Limch1-201ENSMUST00000038188 Atp10dQ8K2X1 1416 aa13.74□□□□□ -0.21
Limch1-201ENSMUST00000038188 CenpbP27790 599 aa13.74□□□□□ -0.21
Limch1-201ENSMUST00000038188 GnpatP98192 678 aa13.73□□□□□ -0.21
Limch1-201ENSMUST00000038188 AqrQ8CFQ3 1481 aaKnown RBP13.73□□□□□ -0.21
Limch1-201ENSMUST00000038188 Stard8Q8K031 1019 aa13.73□□□□□ -0.21
Limch1-201ENSMUST00000038188 Chmp3Q9CQ10 224 aa13.72□□□□□ -0.21
Limch1-201ENSMUST00000038188 Ttll5Q8CHB8 1328 aa13.72□□□□□ -0.21
Limch1-201ENSMUST00000038188 Adgrl3Q80TS3 1537 aa13.72□□□□□ -0.21
Limch1-201ENSMUST00000038188 Klf15Q9EPW2 415 aa13.71□□□□□ -0.21
Limch1-201ENSMUST00000038188 Slc4a1apE9PX68 744 aa13.71□□□□□ -0.22
Limch1-201ENSMUST00000038188 Kif21aQ9QXL2 1672 aa13.71□□□□□ -0.22
Limch1-201ENSMUST00000038188 Upf2A2AT37 1269 aaKnown RBP13.7□□□□□ -0.22
Limch1-201ENSMUST00000038188 Gsto1O09131 240 aa13.7□□□□□ -0.22
Limch1-201ENSMUST00000038188 Eva1cP58659 440 aa13.68□□□□□ -0.22
Limch1-201ENSMUST00000038188 Rtl5Q5DTT4 599 aa13.68□□□□□ -0.22
Limch1-201ENSMUST00000038188 Tcerg1Q8CGF7 1100 aaKnown RBP13.68□□□□□ -0.22
Limch1-201ENSMUST00000038188 Puf60Q3UEB3 564 aaKnown RBP13.68□□□□□ -0.22
Limch1-201ENSMUST00000038188 Cux1P53564 1515 aa13.67□□□□□ -0.22
Limch1-201ENSMUST00000038188 Stk31Q99MW1 1018 aa13.67□□□□□ -0.22
Limch1-201ENSMUST00000038188 SynmQ70IV5 1561 aa13.67□□□□□ -0.22
Limch1-201ENSMUST00000038188 Fam163aQ8CAA5 168 aa13.66□□□□□ -0.22
Limch1-201ENSMUST00000038188 ZgpatQ8VDM1 511 aa13.66□□□□□ -0.22
Limch1-201ENSMUST00000038188 Cc2d1aQ8K1A6 943 aa13.66□□□□□ -0.22
Limch1-201ENSMUST00000038188 Rbm5Q91YE7 815 aaKnown RBP13.65□□□□□ -0.22
Limch1-201ENSMUST00000038188 Abcc1O35379 1528 aa13.64□□□□□ -0.23
Limch1-201ENSMUST00000038188 Plagl1Q9JLQ4 704 aa13.64□□□□□ -0.23
Limch1-201ENSMUST00000038188 Zeb2Q9R0G7 1215 aa13.64□□□□□ -0.23
Limch1-201ENSMUST00000038188 Fmnl2A2APV2 1086 aa13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Amer1Q7TS75 1132 aa13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Thoc2B1AZI6 1594 aaKnown RBP13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Hsp90aa1P07901 733 aaKnown RBP13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Smg7Q5RJH6 1138 aaKnown RBP13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Mroh2bQ7M6Y6 1581 aa13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 Magi1Q6RHR9 1471 aa13.63□□□□□ -0.23
Limch1-201ENSMUST00000038188 4933416C03RikQ3V063 378 aa13.62□□□□□ -0.23
Limch1-201ENSMUST00000038188 Ccar1Q8CH18 1146 aaKnown RBP13.62□□□□□ -0.23
Limch1-201ENSMUST00000038188 Speer4bQ9D9F7 267 aa13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Cd109Q8R422 1442 aa13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Plekhd1B2RPU2 505 aa13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Gimap6Q8K349 305 aa13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Emilin2Q8K482 1074 aa13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Pes1Q9EQ61 584 aaKnown RBP13.61□□□□□ -0.23
Limch1-201ENSMUST00000038188 Sh3bp5Q9Z131 463 aa13.6□□□□□ -0.23
Limch1-201ENSMUST00000038188 Gm10563F6WIE4 79 aa13.6□□□□□ -0.23
Limch1-201ENSMUST00000038188 Gm21680A0A0G2JGR8 267 aa13.6□□□□□ -0.23
Limch1-201ENSMUST00000038188 Tmco5bQ80X59 307 aa13.6□□□□□ -0.23
Limch1-201ENSMUST00000038188 Dennd6aQ8BH65 605 aa13.59□□□□□ -0.23
Limch1-201ENSMUST00000038188 Zfp644E9QA22 1323 aa13.59□□□□□ -0.23
Limch1-201ENSMUST00000038188 Ofd1Q80Z25 1017 aa13.59□□□□□ -0.23
Limch1-201ENSMUST00000038188 Usp47Q8BY87 1376 aa13.58□□□□□ -0.24
Limch1-201ENSMUST00000038188 Bicdl1A0JNT9 577 aa13.58□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gsdma3Q5Y4Y6 464 aa13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Rab11fip3Q8CHD8 1047 aa13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Sin3aQ60520 1274 aaKnown RBP13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Tomm22Q9CPQ3 142 aa13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Pcgf6Q99NA9 353 aa13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Armcx1Q9CX83 456 aa13.57□□□□□ -0.24
Limch1-201ENSMUST00000038188 Tsen2Q6P7W5 460 aa13.56□□□□□ -0.24
Limch1-201ENSMUST00000038188 Farp2Q91VS8 1065 aa13.56□□□□□ -0.24
Limch1-201ENSMUST00000038188 FanciQ8K368 1330 aa13.56□□□□□ -0.24
Limch1-201ENSMUST00000038188 Q3UJC8 639 aa13.55□□□□□ -0.24
Limch1-201ENSMUST00000038188 Speer4f1Q9D5Q6 258 aa13.55□□□□□ -0.24
Limch1-201ENSMUST00000038188 Bcl2l13P59017 434 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 MpndQ3TV65 487 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 BcanQ61361 883 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 MycnP03966 462 aaKnown RBP13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 Cdk19Q8BWD8 501 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 Rassf8Q8CJ96 419 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 Sytl4Q9R0Q1 673 aa13.54□□□□□ -0.24
Limch1-201ENSMUST00000038188 Golga2Q921M4 999 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 ApobrQ8VBT6 942 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Eif4g3Q80XI3 1579 aaKnown RBP13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gm21663A0A0G2JE01 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gm7361D3Z6R1 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 5031410I06RikE9Q4E0 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gm1979E9QAN3 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gm5862K7N5V5 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Gm10220K7N660 267 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Disp1Q3TDN0 1521 aa13.53□□□□□ -0.24
Limch1-201ENSMUST00000038188 Camsap2Q8C1B1 1461 aa13.52□□□□□ -0.24
Limch1-201ENSMUST00000038188 Chmp4bQ9D8B3 224 aaKnown RBP13.52□□□□□ -0.24
Limch1-201ENSMUST00000038188 Qtrt2B8ZXI1 415 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Pank3Q8R2W9 370 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Wdr7Q920I9 1489 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Mapkbp1Q6NS57 1503 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Pcdh10E9PXQ7 1057 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Hsp90b1P08113 802 aaKnown RBP13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Znf330Q922H9 316 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Sart3Q9JLI8 962 aaKnown RBP13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Wdhd1P59328 1117 aa13.51□□□□□ -0.25
Limch1-201ENSMUST00000038188 Tmem94Q7TSH8 1360 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 41.2 ms