RNA–Protein interactions for RNA: ENSMUST00000034928.11

Tpm1-202, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 5 BASIC

Gene Tpm1, Length 1,824 nt, Biotype protein coding, Subcellular localisation Axon .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-202ENSMUST00000034928 Pabpn1Q8CCS6 302 aaKnown RBP19.37■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Ppip5k1A2ARP1 1436 aa19.37■□□□□ 0.69
Tpm1-202ENSMUST00000034928 AknaQ80VW7 1404 aa19.36■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Arhgap5P97393 1501 aa19.36■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Anp32aO35381 247 aa19.35■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Iqgap1Q9JKF1 1657 aaKnown RBP19.35■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Dot1lQ6XZL8 1540 aa19.35■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Ssh2Q5SW75 1423 aa19.34■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Prdm16A2A935 1275 aa19.34■□□□□ 0.69
Tpm1-202ENSMUST00000034928 Slc4a2P13808 1237 aaKnown RBP19.34■□□□□ 0.69
Tpm1-202ENSMUST00000034928 NhsB1AV60 1647 aa19.32■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Abcc3B2RX12 1523 aa19.32■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Washc2Q6PGL7 1334 aa19.31■□□□□ 0.68
Tpm1-202ENSMUST00000034928 SafbD3YXK2 937 aaKnown RBP19.31■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Gapvd1Q6PAR5 1458 aa19.31■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Exoc6Q8R313 802 aa19.3■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Rrp7aQ9D1C9 280 aaKnown RBP19.28■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Wwc2Q6NXJ0 1187 aa19.27■□□□□ 0.68
Tpm1-202ENSMUST00000034928 Setd1aE9PYH6 1716 aa19.27■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Cdk13Q69ZA1 1511 aaKnown RBP19.26■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Gm38655A0A286YDK6 273 aa19.26■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Sart1Q9Z315 806 aaKnown RBP19.26■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Trappc8E9PWG2 1437 aa19.26■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Cd109Q8R422 1442 aa19.26■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Fkbp15Q6P9Q6 1216 aaKnown RBP19.25■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Abca8bQ8K440 1620 aa19.23■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Arid4bA2CG63 1314 aaKnown RBP19.23■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Slc24a1Q91WD8 1130 aa19.23■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Abcc1O35379 1528 aa19.22■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Atp7aQ64430 1491 aa19.22■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Robo2Q7TPD3 1470 aa19.22■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Igf1rQ60751 1373 aa19.22■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Zmym4A2A791 1549 aaKnown RBP19.22■□□□□ 0.67
Tpm1-202ENSMUST00000034928 Kcna4Q61423 654 aa19.2■□□□□ 0.66
Tpm1-202ENSMUST00000034928 AI481877A2ALV5 1481 aa19.2■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Grwd1Q810D6 446 aaKnown RBP19.18■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Spag9Q58A65 1321 aaKnown RBP19.18■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Nsd2Q8BVE8 1365 aa19.18■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Atp10dQ8K2X1 1416 aa19.17■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Anp32bQ9EST5 272 aaKnown RBP19.16■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Chd1P40201 1711 aa19.16■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Cdc42bpbQ7TT50 1713 aa19.15■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Cep170Q6A065 1588 aa19.14■□□□□ 0.66
Tpm1-202ENSMUST00000034928 Tarbp1E9Q368 1579 aa19.14■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Kdm5cP41230 1554 aa19.13■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Pde4cQ3UEI1 686 aa19.12■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Abca17E9PX95 1733 aa19.11■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Tubgcp6G5E8P0 1769 aa19.11■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Fam71e1A1L3C1 212 aa19.11■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Rtl5Q5DTT4 599 aa19.11■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Edc4Q3UJB9 1406 aaKnown RBP19.1■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Adamts13Q769J6 1426 aa19.09■□□□□ 0.65
Tpm1-202ENSMUST00000034928 Kif1bQ60575 1816 aaKnown RBP19.08■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Ofd1Q80Z25 1017 aa19.07■□□□□ 0.64
Tpm1-202ENSMUST00000034928 AnkarA2RT91 1465 aa19.07■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Kidins220E9Q9B7 1793 aa19.06■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Wdr43Q6ZQL4 677 aaKnown RBP19.06■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Sbno1Q689Z5 1390 aa19.05■□□□□ 0.64
Tpm1-202ENSMUST00000034928 ShprhQ7TPQ3 1674 aa19.05■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Usp54Q8BL06 1588 aaKnown RBP19.05■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Ythdc2B2RR83 1445 aaKnown RBP19.05■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Ylpm1Q9R0I7 1386 aaKnown RBP19.05■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Eif5bQ05D44 1216 aaKnown RBP19.04■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Upf2A2AT37 1269 aaKnown RBP19.04■□□□□ 0.64
Tpm1-202ENSMUST00000034928 Mroh3A0A1D5RM54 893 aa19.02■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Ifit1bl1D3Z6F0 470 aa19.01■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Zscan21Q07231 555 aa19.01■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Nolc1E9Q5C9 702 aaKnown RBP19■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Uggt2E9Q4X2 1504 aa19■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Zfyve16Q80U44 1528 aa19■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Tulp4Q9JIL5 1547 aa18.99■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Nos1Q9Z0J4 1429 aa18.98■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Mink1Q9JM52 1308 aa18.97■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Kank1E9Q238 1360 aa18.97■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Map3k5O35099 1380 aa18.97■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Stard8Q8K031 1019 aa18.97■□□□□ 0.63
Tpm1-202ENSMUST00000034928 Pola1P33609 1465 aa18.96■□□□□ 0.63
Tpm1-202ENSMUST00000034928 PrxO55103 1391 aa18.96■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Mak16Q8BGS0 296 aaKnown RBP18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Col17a1Q07563 1470 aa18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Tmf1B9EKI3 1091 aa18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Ppp4r2Q0VGB7 417 aa18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Zbtb7cQ8VCZ7 619 aa18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Xrn1P97789 1719 aaKnown RBP18.95■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Abcc6Q9R1S7 1498 aa18.94■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Rpgrip1lQ8CG73 1264 aa18.94■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Znf518aB2RRF6 1478 aaKnown RBP18.93■□□□□ 0.62
Tpm1-202ENSMUST00000034928 PtprtQ99M80 1454 aa18.93■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Gm156Q58A37 223 aa18.93■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Ifnlr1Q8CGK5 535 aa18.93■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Myo5cE9Q1F5 1742 aa18.93■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Tex14Q7M6U3 1450 aa18.92■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Plch2A2AP18 1501 aa18.92■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Pank3Q8R2W9 370 aa18.92■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Ttbk1Q6PCN3 1308 aa18.92■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Zscan10Q3URR7 782 aa18.9■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Supt16hQ920B9 1047 aa18.9■□□□□ 0.62
Tpm1-202ENSMUST00000034928 L3mbtl2P59178 703 aa18.9■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Srcin1Q9QWI6 1250 aa18.9■□□□□ 0.62
Tpm1-202ENSMUST00000034928 Lemd3Q9WU40 921 aa18.9■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 36.5 ms