RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Anks4bQ8K3X6 423 aa32.29■■■□□ 2.76
Cln6-201ENSMUST00000034776 Robo2Q7TPD3 1470 aa32.28■■■□□ 2.76
Cln6-201ENSMUST00000034776 Ncoa1P70365 1447 aa32.28■■■□□ 2.76
Cln6-201ENSMUST00000034776 Rock1P70335 1354 aa32.28■■■□□ 2.76
Cln6-201ENSMUST00000034776 Zbtb7cQ8VCZ7 619 aa32.27■■■□□ 2.76
Cln6-201ENSMUST00000034776 Atp7aQ64430 1491 aa32.25■■■□□ 2.75
Cln6-201ENSMUST00000034776 Mug2P28666 1451 aa32.24■■■□□ 2.75
Cln6-201ENSMUST00000034776 Pde4cQ3UEI1 686 aa32.23■■■□□ 2.75
Cln6-201ENSMUST00000034776 Usp54Q8BL06 1588 aaKnown RBP32.22■■■□□ 2.75
Cln6-201ENSMUST00000034776 ShprhQ7TPQ3 1674 aa32.22■■■□□ 2.75
Cln6-201ENSMUST00000034776 Dapk1Q80YE7 1442 aa32.22■■■□□ 2.75
Cln6-201ENSMUST00000034776 Xrn1P97789 1719 aaKnown RBP32.21■■■□□ 2.75
Cln6-201ENSMUST00000034776 Kif1bQ60575 1816 aaKnown RBP32.21■■■□□ 2.75
Cln6-201ENSMUST00000034776 Myom3A2ABU4 1439 aa32.21■■■□□ 2.75
Cln6-201ENSMUST00000034776 Cpsf1Q9EPU4 1441 aaKnown RBP32.18■■■□□ 2.74
Cln6-201ENSMUST00000034776 Nos1Q9Z0J4 1429 aa32.17■■■□□ 2.74
Cln6-201ENSMUST00000034776 Lemd3Q9WU40 921 aa32.17■■■□□ 2.74
Cln6-201ENSMUST00000034776 Ppip5k1A2ARP1 1436 aa32.16■■■□□ 2.74
Cln6-201ENSMUST00000034776 Gm156Q58A37 223 aa32.16■■■□□ 2.74
Cln6-201ENSMUST00000034776 Iqgap1Q9JKF1 1657 aaKnown RBP32.16■■■□□ 2.74
Cln6-201ENSMUST00000034776 Tarbp1E9Q368 1579 aa32.13■■■□□ 2.73
Cln6-201ENSMUST00000034776 Polr3aB2RXC6 1390 aa32.13■■■□□ 2.73
Cln6-201ENSMUST00000034776 Washc2Q6PGL7 1334 aa32.11■■■□□ 2.73
Cln6-201ENSMUST00000034776 Rundc1Q0VDN7 615 aa32.11■■■□□ 2.73
Cln6-201ENSMUST00000034776 Cwc22Q8C5N3 908 aaKnown RBP32.11■■■□□ 2.73
Cln6-201ENSMUST00000034776 Hnrnpul2Q00PI9 745 aaKnown RBP32.1■■■□□ 2.73
Cln6-201ENSMUST00000034776 Smg6P61406 1418 aaKnown RBP32.1■■■□□ 2.73
Cln6-201ENSMUST00000034776 Cdk13Q69ZA1 1511 aaKnown RBP32.09■■■□□ 2.73
Cln6-201ENSMUST00000034776 Naip6Q9JIB6 1403 aa32.09■■■□□ 2.73
Cln6-201ENSMUST00000034776 Grwd1Q810D6 446 aaKnown RBP32.08■■■□□ 2.73
Cln6-201ENSMUST00000034776 Nsd2Q8BVE8 1365 aa32.07■■■□□ 2.72
Cln6-201ENSMUST00000034776 Myo5cE9Q1F5 1742 aa32.06■■■□□ 2.72
Cln6-201ENSMUST00000034776 Edc4Q3UJB9 1406 aaKnown RBP32.05■■■□□ 2.72
Cln6-201ENSMUST00000034776 RalgapbQ8BQZ4 1484 aa32.05■■■□□ 2.72
Cln6-201ENSMUST00000034776 Ak9G3UYQ4 1894 aa32.05■■■□□ 2.72
Cln6-201ENSMUST00000034776 Card11Q8CIS0 1159 aa32.04■■■□□ 2.72
Cln6-201ENSMUST00000034776 Znf518aB2RRF6 1478 aaKnown RBP32.03■■■□□ 2.72
Cln6-201ENSMUST00000034776 Hdac5Q9Z2V6 1113 aa32■■■□□ 2.71
Cln6-201ENSMUST00000034776 Kif3bQ61771 747 aa32■■■□□ 2.71
Cln6-201ENSMUST00000034776 OvosQ3UU35 1456 aa32■■■□□ 2.71
Cln6-201ENSMUST00000034776 Kdm5cP41230 1554 aa31.99■■■□□ 2.71
Cln6-201ENSMUST00000034776 Plekhg5Q66T02 1073 aa31.98■■■□□ 2.71
Cln6-201ENSMUST00000034776 Ylpm1Q9R0I7 1386 aaKnown RBP31.98■■■□□ 2.71
Cln6-201ENSMUST00000034776 Fndc1E9Q043 1732 aa31.95■■■□□ 2.71
Cln6-201ENSMUST00000034776 Adamts13Q769J6 1426 aa31.94■■■□□ 2.7
Cln6-201ENSMUST00000034776 Atp10aO54827 1508 aa31.93■■■□□ 2.7
Cln6-201ENSMUST00000034776 Adgrl3Q80TS3 1537 aa31.92■■■□□ 2.7
Cln6-201ENSMUST00000034776 AglF8VPN4 1532 aa31.91■■■□□ 2.7
Cln6-201ENSMUST00000034776 Topbp1Q6ZQF0 1515 aa31.89■■■□□ 2.7
Cln6-201ENSMUST00000034776 Tmem131lQ3U3D7 1597 aa31.88■■■□□ 2.69
Cln6-201ENSMUST00000034776 AnkarA2RT91 1465 aa31.87■■■□□ 2.69
Cln6-201ENSMUST00000034776 Plch2A2AP18 1501 aa31.87■■■□□ 2.69
Cln6-201ENSMUST00000034776 Rock2P70336 1388 aa31.85■■■□□ 2.69
Cln6-201ENSMUST00000034776 Stra8P70278 393 aa31.85■■■□□ 2.69
Cln6-201ENSMUST00000034776 Abca6Q8K441 1624 aa31.84■■■□□ 2.69
Cln6-201ENSMUST00000034776 Ttc21bQ0HA38 1315 aa31.84■■■□□ 2.69
Cln6-201ENSMUST00000034776 Mroh3A0A1D5RM54 893 aa31.82■■■□□ 2.69
Cln6-201ENSMUST00000034776 Kiaa0556Q8C753 1610 aa31.81■■■□□ 2.68
Cln6-201ENSMUST00000034776 Ifit1bl1D3Z6F0 470 aa31.81■■■□□ 2.68
Cln6-201ENSMUST00000034776 Clasp1Q80TV8 1535 aaKnown RBP31.81■■■□□ 2.68
Cln6-201ENSMUST00000034776 Tulp4Q9JIL5 1547 aa31.8■■■□□ 2.68
Cln6-201ENSMUST00000034776 Ptch1Q61115 1434 aa31.8■■■□□ 2.68
Cln6-201ENSMUST00000034776 Gm13695A2AK44 830 aa31.8■■■□□ 2.68
Cln6-201ENSMUST00000034776 Col17a1Q07563 1470 aa31.79■■■□□ 2.68
Cln6-201ENSMUST00000034776 Uggt2E9Q4X2 1504 aa31.77■■■□□ 2.68
Cln6-201ENSMUST00000034776 Cdc42bpgQ80UW5 1551 aa31.77■■■□□ 2.68
Cln6-201ENSMUST00000034776 Setd1aE9PYH6 1716 aa31.76■■■□□ 2.67
Cln6-201ENSMUST00000034776 Prex1Q69ZK0 1650 aa31.76■■■□□ 2.67
Cln6-201ENSMUST00000034776 Gli2Q0VGT2 1544 aa31.75■■■□□ 2.67
Cln6-201ENSMUST00000034776 Abcc6Q9R1S7 1498 aa31.75■■■□□ 2.67
Cln6-201ENSMUST00000034776 Depdc5P61460 1591 aa31.75■■■□□ 2.67
Cln6-201ENSMUST00000034776 Iqgap3F8VQ29 1632 aa31.74■■■□□ 2.67
Cln6-201ENSMUST00000034776 Erich6D3Z6S9 713 aa31.72■■■□□ 2.67
Cln6-201ENSMUST00000034776 Dip2cE9PWR4 1557 aa31.72■■■□□ 2.67
Cln6-201ENSMUST00000034776 RereQ80TZ9 1558 aa31.72■■■□□ 2.67
Cln6-201ENSMUST00000034776 Sall3Q62255 1320 aa31.69■■■□□ 2.66
Cln6-201ENSMUST00000034776 Znf710Q3U288 666 aa31.66■■■□□ 2.66
Cln6-201ENSMUST00000034776 Abca8aQ8K442 1620 aa31.65■■■□□ 2.66
Cln6-201ENSMUST00000034776 AdgbG3UZ78 1657 aa31.65■■■□□ 2.66
Cln6-201ENSMUST00000034776 Cul9Q80TT8 1865 aa31.65■■■□□ 2.66
Cln6-201ENSMUST00000034776 ErbinQ80TH2 1402 aa31.64■■■□□ 2.66
Cln6-201ENSMUST00000034776 Ttc37F8VPK0 1563 aa31.6■■■□□ 2.65
Cln6-201ENSMUST00000034776 Wwc2Q6NXJ0 1187 aa31.6■■■□□ 2.65
Cln6-201ENSMUST00000034776 Exoc6Q8R313 802 aa31.58■■■□□ 2.65
Cln6-201ENSMUST00000034776 Tubgcp6G5E8P0 1769 aa31.57■■■□□ 2.65
Cln6-201ENSMUST00000034776 Akap12Q9WTQ5 1684 aa31.57■■■□□ 2.64
Cln6-201ENSMUST00000034776 Mrs2Q5NCE8 434 aa31.57■■■□□ 2.64
Cln6-201ENSMUST00000034776 AatkQ80YE4 1365 aa31.56■■■□□ 2.64
Cln6-201ENSMUST00000034776 Tecpr2Q3UH45 1423 aa31.56■■■□□ 2.64
Cln6-201ENSMUST00000034776 Stk24Q99KH8 431 aa31.55■■■□□ 2.64
Cln6-201ENSMUST00000034776 Trpm1Q2TV84 1622 aa31.55■■■□□ 2.64
Cln6-201ENSMUST00000034776 Adgrb3Q80ZF8 1522 aa31.54■■■□□ 2.64
Cln6-201ENSMUST00000034776 PnisrA2AJT4 805 aaKnown RBP31.54■■■□□ 2.64
Cln6-201ENSMUST00000034776 Cep152A2AUM9 1736 aaKnown RBP31.54■■■□□ 2.64
Cln6-201ENSMUST00000034776 Slc4a2P13808 1237 aaKnown RBP31.54■■■□□ 2.64
Cln6-201ENSMUST00000034776 Ehbp1l1Q99MS7 1716 aa31.54■■■□□ 2.64
Cln6-201ENSMUST00000034776 Ppp1r18Q8BQ30 594 aa31.52■■■□□ 2.64
Cln6-201ENSMUST00000034776 Tnnt3Q9QZ47 272 aa31.52■■■□□ 2.64
Cln6-201ENSMUST00000034776 Yeats2Q3TUF7 1407 aa31.52■■■□□ 2.64
Cln6-201ENSMUST00000034776 Prdm2A2A7B5 1709 aaKnown RBP31.52■■■□□ 2.64
Retrieved 100 of 22,080 RNA–protein pairs in 50.6 ms