RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Nos1Q9Z0J4 1429 aa28.98■■■□□ 2.23
Trim47-201ENSMUST00000021120 Spag9Q58A65 1321 aaKnown RBP28.98■■■□□ 2.23
Trim47-201ENSMUST00000021120 Kif21bQ9QXL1 1668 aa28.95■■■□□ 2.23
Trim47-201ENSMUST00000021120 Ptch1Q61115 1434 aa28.94■■■□□ 2.22
Trim47-201ENSMUST00000021120 Fndc1E9Q043 1732 aa28.94■■■□□ 2.22
Trim47-201ENSMUST00000021120 Supt6hQ62383 1726 aaKnown RBP28.94■■■□□ 2.22
Trim47-201ENSMUST00000021120 Zbtb7cQ8VCZ7 619 aa28.93■■■□□ 2.22
Trim47-201ENSMUST00000021120 Clstn2Q9ER65 966 aa28.93■■■□□ 2.22
Trim47-201ENSMUST00000021120 Map4P27546 1125 aaKnown RBP28.93■■■□□ 2.22
Trim47-201ENSMUST00000021120 Cul9Q80TT8 1865 aa28.92■■■□□ 2.22
Trim47-201ENSMUST00000021120 Hecw2Q6I6G8 1578 aa28.91■■■□□ 2.22
Trim47-201ENSMUST00000021120 Dip2cE9PWR4 1557 aa28.91■■■□□ 2.22
Trim47-201ENSMUST00000021120 RereQ80TZ9 1558 aa28.91■■■□□ 2.22
Trim47-201ENSMUST00000021120 Usp54Q8BL06 1588 aaKnown RBP28.91■■■□□ 2.22
Trim47-201ENSMUST00000021120 Synj2Q9D2G5 1434 aa28.91■■■□□ 2.22
Trim47-201ENSMUST00000021120 Ttll5Q8CHB8 1328 aa28.9■■■□□ 2.22
Trim47-201ENSMUST00000021120 Znf518aB2RRF6 1478 aaKnown RBP28.87■■■□□ 2.21
Trim47-201ENSMUST00000021120 Cdc42bpgQ80UW5 1551 aa28.85■■■□□ 2.21
Trim47-201ENSMUST00000021120 Kif1bQ60575 1816 aaKnown RBP28.85■■■□□ 2.21
Trim47-201ENSMUST00000021120 ShprhQ7TPQ3 1674 aa28.84■■■□□ 2.21
Trim47-201ENSMUST00000021120 Pkd2O35245 966 aa28.82■■■□□ 2.2
Trim47-201ENSMUST00000021120 Trak1Q6PD31 939 aa28.82■■■□□ 2.2
Trim47-201ENSMUST00000021120 Asxl1P59598 1514 aa28.82■■■□□ 2.2
Trim47-201ENSMUST00000021120 Kif3bQ61771 747 aa28.81■■■□□ 2.2
Trim47-201ENSMUST00000021120 Plch2A2AP18 1501 aa28.79■■■□□ 2.2
Trim47-201ENSMUST00000021120 Gli2Q0VGT2 1544 aa28.79■■■□□ 2.2
Trim47-201ENSMUST00000021120 Hspa5P20029 655 aaKnown RBP28.78■■■□□ 2.2
Trim47-201ENSMUST00000021120 Hnrnpul2Q00PI9 745 aaKnown RBP28.78■■■□□ 2.2
Trim47-201ENSMUST00000021120 Yeats2Q3TUF7 1407 aa28.78■■■□□ 2.2
Trim47-201ENSMUST00000021120 Myo5cE9Q1F5 1742 aa28.78■■■□□ 2.2
Trim47-201ENSMUST00000021120 PtprgQ05909 1442 aa28.77■■■□□ 2.2
Trim47-201ENSMUST00000021120 Pde4cQ3UEI1 686 aa28.76■■■□□ 2.19
Trim47-201ENSMUST00000021120 Topbp1Q6ZQF0 1515 aa28.74■■■□□ 2.19
Trim47-201ENSMUST00000021120 Robo2Q7TPD3 1470 aa28.73■■■□□ 2.19
Trim47-201ENSMUST00000021120 Tnnt3Q9QZ47 272 aa28.72■■■□□ 2.19
Trim47-201ENSMUST00000021120 Cd109Q8R422 1442 aa28.72■■■□□ 2.19
Trim47-201ENSMUST00000021120 Naip6Q9JIB6 1403 aa28.71■■■□□ 2.19
Trim47-201ENSMUST00000021120 Trpm1Q2TV84 1622 aa28.7■■■□□ 2.18
Trim47-201ENSMUST00000021120 Kif14L0N7N1 1674 aaKnown RBP28.69■■■□□ 2.18
Trim47-201ENSMUST00000021120 Dhx9O70133 1380 aaKnown RBP28.69■■■□□ 2.18
Trim47-201ENSMUST00000021120 Cfap65Q3V0B4 1847 aa28.68■■■□□ 2.18
Trim47-201ENSMUST00000021120 Rprd2Q6NXI6 1469 aaKnown RBP28.67■■■□□ 2.18
Trim47-201ENSMUST00000021120 Uggt2E9Q4X2 1504 aa28.67■■■□□ 2.18
Trim47-201ENSMUST00000021120 Gm38655A0A286YDK6 273 aa28.67■■■□□ 2.18
Trim47-201ENSMUST00000021120 Usp47Q8BY87 1376 aa28.65■■■□□ 2.18
Trim47-201ENSMUST00000021120 Pik3c2gO70167 1506 aa28.65■■■□□ 2.18
Trim47-201ENSMUST00000021120 Nsd2Q8BVE8 1365 aa28.63■■■□□ 2.17
Trim47-201ENSMUST00000021120 Myom3A2ABU4 1439 aa28.63■■■□□ 2.17
Trim47-201ENSMUST00000021120 Pcdh10E9PXQ7 1057 aa28.63■■■□□ 2.17
Trim47-201ENSMUST00000021120 Qser1A2BIE1 1698 aa28.62■■■□□ 2.17
Trim47-201ENSMUST00000021120 Zmym4A2A791 1549 aaKnown RBP28.62■■■□□ 2.17
Trim47-201ENSMUST00000021120 Abca6Q8K441 1624 aa28.61■■■□□ 2.17
Trim47-201ENSMUST00000021120 Atp7aQ64430 1491 aa28.59■■■□□ 2.17
Trim47-201ENSMUST00000021120 Prex1Q69ZK0 1650 aa28.58■■■□□ 2.17
Trim47-201ENSMUST00000021120 Ylpm1Q9R0I7 1386 aaKnown RBP28.58■■■□□ 2.17
Trim47-201ENSMUST00000021120 NpatQ8BMA5 1420 aa28.58■■■□□ 2.17
Trim47-201ENSMUST00000021120 Naip5Q9R016 1403 aa28.56■■■□□ 2.16
Trim47-201ENSMUST00000021120 DroshaQ5HZJ0 1373 aaKnown RBP28.55■■■□□ 2.16
Trim47-201ENSMUST00000021120 Dot1lQ6XZL8 1540 aa28.52■■■□□ 2.16
Trim47-201ENSMUST00000021120 Tmem131lQ3U3D7 1597 aa28.51■■■□□ 2.15
Trim47-201ENSMUST00000021120 AnkarA2RT91 1465 aa28.49■■■□□ 2.15
Trim47-201ENSMUST00000021120 Dnajc5gQ8C632 165 aa28.49■■■□□ 2.15
Trim47-201ENSMUST00000021120 Ttc21bQ0HA38 1315 aa28.46■■■□□ 2.15
Trim47-201ENSMUST00000021120 Plppr3Q7TPB0 716 aa28.46■■■□□ 2.15
Trim47-201ENSMUST00000021120 Tarbp1E9Q368 1579 aa28.44■■■□□ 2.14
Trim47-201ENSMUST00000021120 Hdac5Q9Z2V6 1113 aa28.43■■■□□ 2.14
Trim47-201ENSMUST00000021120 Rgl3Q3UYI5 709 aa28.41■■■□□ 2.14
Trim47-201ENSMUST00000021120 Edc4Q3UJB9 1406 aaKnown RBP28.41■■■□□ 2.14
Trim47-201ENSMUST00000021120 Rock1P70335 1354 aa28.41■■■□□ 2.14
Trim47-201ENSMUST00000021120 Ppip5k1A2ARP1 1436 aa28.4■■■□□ 2.14
Trim47-201ENSMUST00000021120 Erich6D3Z6S9 713 aa28.4■■■□□ 2.14
Trim47-201ENSMUST00000021120 Iqgap3F8VQ29 1632 aa28.38■■■□□ 2.13
Trim47-201ENSMUST00000021120 Talpid3E9PV87 1520 aa28.37■■■□□ 2.13
Trim47-201ENSMUST00000021120 Adamts7Q68SA9 1657 aa28.37■■■□□ 2.13
Trim47-201ENSMUST00000021120 SafbD3YXK2 937 aaKnown RBP28.37■■■□□ 2.13
Trim47-201ENSMUST00000021120 Camsap2Q8C1B1 1461 aa28.36■■■□□ 2.13
Trim47-201ENSMUST00000021120 Afap1Q80YS6 731 aa28.36■■■□□ 2.13
Trim47-201ENSMUST00000021120 Rsph4aQ8BYM7 716 aa28.36■■■□□ 2.13
Trim47-201ENSMUST00000021120 Adamtsl3G3UXC7 1706 aa28.34■■■□□ 2.13
Trim47-201ENSMUST00000021120 Akap12Q9WTQ5 1684 aa28.34■■■□□ 2.13
Trim47-201ENSMUST00000021120 Znf710Q3U288 666 aa28.34■■■□□ 2.13
Trim47-201ENSMUST00000021120 Fam71e1A1L3C1 212 aa28.33■■■□□ 2.12
Trim47-201ENSMUST00000021120 CltcQ68FD5 1675 aaKnown RBP28.32■■■□□ 2.12
Trim47-201ENSMUST00000021120 Washc2Q6PGL7 1334 aa28.3■■■□□ 2.12
Trim47-201ENSMUST00000021120 Prdm2A2A7B5 1709 aaKnown RBP28.3■■■□□ 2.12
Trim47-201ENSMUST00000021120 Stra8P70278 393 aa28.3■■■□□ 2.12
Trim47-201ENSMUST00000021120 Ino80Q6ZPV2 1559 aa28.27■■■□□ 2.12
Trim47-201ENSMUST00000021120 Knl1Q66JQ7 1612 aa28.27■■■□□ 2.12
Trim47-201ENSMUST00000021120 ErbinQ80TH2 1402 aa28.27■■■□□ 2.12
Trim47-201ENSMUST00000021120 RictorQ6QI06 1708 aa28.25■■■□□ 2.11
Trim47-201ENSMUST00000021120 Abca8aQ8K442 1620 aa28.24■■■□□ 2.11
Trim47-201ENSMUST00000021120 Myom2Q14BI5 1463 aa28.24■■■□□ 2.11
Trim47-201ENSMUST00000021120 Hfm1D3Z4R1 1434 aa28.23■■■□□ 2.11
Trim47-201ENSMUST00000021120 Tecpr2Q3UH45 1423 aa28.22■■■□□ 2.11
Trim47-201ENSMUST00000021120 Abcc6Q9R1S7 1498 aa28.21■■■□□ 2.11
Trim47-201ENSMUST00000021120 Iqgap1Q9JKF1 1657 aaKnown RBP28.21■■■□□ 2.11
Trim47-201ENSMUST00000021120 Mroh3A0A1D5RM54 893 aa28.21■■■□□ 2.11
Trim47-201ENSMUST00000021120 Stk24Q99KH8 431 aa28.21■■■□□ 2.11
Trim47-201ENSMUST00000021120 Mbd5B1AYB6 1498 aa28.2■■■□□ 2.11
Trim47-201ENSMUST00000021120 Adgrb3Q80ZF8 1522 aa28.19■■■□□ 2.1
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms