RNA–Protein interactions for RNA: ENSMUST00000005509.10

Stx1a-201, Transcript of Syntaxin-1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Stx1a, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1a-201ENSMUST00000005509 Mia2Q91ZV0 1396 aa28.3■■■□□ 2.12
Stx1a-201ENSMUST00000005509 Topbp1Q6ZQF0 1515 aa28.27■■■□□ 2.12
Stx1a-201ENSMUST00000005509 Pde4cQ3UEI1 686 aa28.26■■■□□ 2.11
Stx1a-201ENSMUST00000005509 AlkP97793 1621 aa28.26■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Vps8Q0P5W1 1427 aa28.25■■■□□ 2.11
Stx1a-201ENSMUST00000005509 ShprhQ7TPQ3 1674 aa28.25■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Supt6hQ62383 1726 aaKnown RBP28.23■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Plch2A2AP18 1501 aa28.23■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Naip5Q9R016 1403 aa28.22■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Uggt2E9Q4X2 1504 aa28.22■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Fhad1A6PWD2 1420 aa28.22■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Brwd3A2AHJ4 1799 aa28.22■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Map4P27546 1125 aaKnown RBP28.21■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Nup155Q99P88 1391 aaKnown RBP28.21■■■□□ 2.11
Stx1a-201ENSMUST00000005509 CltcQ68FD5 1675 aaKnown RBP28.21■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Kif1bQ60575 1816 aaKnown RBP28.21■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Myo5cE9Q1F5 1742 aa28.21■■■□□ 2.11
Stx1a-201ENSMUST00000005509 Abca6Q8K441 1624 aa28.18■■■□□ 2.1
Stx1a-201ENSMUST00000005509 Myom2Q14BI5 1463 aa28.16■■■□□ 2.1
Stx1a-201ENSMUST00000005509 Trpm2Q91YD4 1506 aa28.16■■■□□ 2.1
Stx1a-201ENSMUST00000005509 PtprmP28828 1452 aa28.15■■■□□ 2.1
Stx1a-201ENSMUST00000005509 Mier1Q5UAK0 511 aa28.15■■■□□ 2.1
Stx1a-201ENSMUST00000005509 Ttll5Q8CHB8 1328 aa28.13■■■□□ 2.09
Stx1a-201ENSMUST00000005509 Clstn2Q9ER65 966 aa28.11■■■□□ 2.09
Stx1a-201ENSMUST00000005509 Prex1Q69ZK0 1650 aa28.1■■■□□ 2.09
Stx1a-201ENSMUST00000005509 Talpid3E9PV87 1520 aa28.1■■■□□ 2.09
Stx1a-201ENSMUST00000005509 Asxl1P59598 1514 aa28.1■■■□□ 2.09
Stx1a-201ENSMUST00000005509 RictorQ6QI06 1708 aa28.09■■■□□ 2.09
Stx1a-201ENSMUST00000005509 Cyb5rlB1AS42 316 aa28.07■■■□□ 2.08
Stx1a-201ENSMUST00000005509 Rsph4aQ8BYM7 716 aa28.07■■■□□ 2.08
Stx1a-201ENSMUST00000005509 Gm13697A2AK42 830 aa28.06■■■□□ 2.08
Stx1a-201ENSMUST00000005509 4930407I10RikD3Z5T8 1512 aa28.04■■■□□ 2.08
Stx1a-201ENSMUST00000005509 Trak1Q6PD31 939 aa28.04■■■□□ 2.08
Stx1a-201ENSMUST00000005509 Ahdc1Q6PAL7 1594 aaKnown RBP28.03■■■□□ 2.08
Stx1a-201ENSMUST00000005509 Knl1Q66JQ7 1612 aa28.01■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Arhgap23Q69ZH9 1483 aa28■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Ttc21bQ0HA38 1315 aa28■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Dip2bQ3UH60 1574 aa27.98■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Mphosph9A6H5Y1 991 aa27.98■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Robo2Q7TPD3 1470 aa27.97■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Hfm1D3Z4R1 1434 aa27.96■■■□□ 2.07
Stx1a-201ENSMUST00000005509 Cd109Q8R422 1442 aa27.95■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Myom3A2ABU4 1439 aa27.95■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Med14A2ABV5 1459 aaKnown RBP27.92■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Ylpm1Q9R0I7 1386 aaKnown RBP27.91■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Adamts7Q68SA9 1657 aa27.91■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Erich6D3Z6S9 713 aa27.9■■■□□ 2.06
Stx1a-201ENSMUST00000005509 Tmem131lQ3U3D7 1597 aa27.89■■■□□ 2.06
Stx1a-201ENSMUST00000005509 PtprgQ05909 1442 aa27.89■■■□□ 2.06
Stx1a-201ENSMUST00000005509 AnkarA2RT91 1465 aa27.88■■■□□ 2.05
Stx1a-201ENSMUST00000005509 Akap12Q9WTQ5 1684 aa27.86■■■□□ 2.05
Stx1a-201ENSMUST00000005509 Nsd2Q8BVE8 1365 aa27.86■■■□□ 2.05
Stx1a-201ENSMUST00000005509 Ercc6l2Q9JIM3 1537 aa27.86■■■□□ 2.05
Stx1a-201ENSMUST00000005509 Topaz1E5FYH1 1653 aa27.85■■■□□ 2.05
Stx1a-201ENSMUST00000005509 Ccer2J3QPU5 274 aa27.81■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Atp7aQ64430 1491 aa27.81■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Dhx9O70133 1380 aaKnown RBP27.8■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Eid3Q3V124 375 aa27.8■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Abcc6Q9R1S7 1498 aa27.8■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Pkd2O35245 966 aa27.77■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Stk24Q99KH8 431 aa27.77■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Lamc1P02468 1607 aaKnown RBP27.77■■■□□ 2.04
Stx1a-201ENSMUST00000005509 Bcl9Q9D219 1425 aa27.76■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Adgrb3Q80ZF8 1522 aa27.74■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Kif21bQ9QXL1 1668 aa27.73■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Skint5A7XUY5 1461 aa27.73■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Sall3Q62255 1320 aa27.71■■■□□ 2.03
Stx1a-201ENSMUST00000005509 GphnQ8BUV3 769 aaKnown RBP27.7■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Iqgap3F8VQ29 1632 aa27.7■■■□□ 2.03
Stx1a-201ENSMUST00000005509 Ino80Q6ZPV2 1559 aa27.69■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Edc4Q3UJB9 1406 aaKnown RBP27.69■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Prdm2A2A7B5 1709 aaKnown RBP27.69■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Scn4aQ9ER60 1841 aa27.69■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Kif13aQ9EQW7 1749 aa27.67■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Chd2E9PZM4 1827 aaKnown RBP27.66■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Dip2aQ8BWT5 1523 aa27.66■■■□□ 2.02
Stx1a-201ENSMUST00000005509 DroshaQ5HZJ0 1373 aaKnown RBP27.65■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Tarbp1E9Q368 1579 aa27.65■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Pip4k2bQ80XI4 416 aa27.64■■■□□ 2.02
Stx1a-201ENSMUST00000005509 Itsn1Q9Z0R4 1714 aa27.61■■■□□ 2.01
Stx1a-201ENSMUST00000005509 Efcab6Q6P1E8 1516 aa27.6■■■□□ 2.01
Stx1a-201ENSMUST00000005509 Tecpr2Q3UH45 1423 aa27.6■■■□□ 2.01
Stx1a-201ENSMUST00000005509 Arid4bA2CG63 1314 aaKnown RBP27.6■■■□□ 2.01
Stx1a-201ENSMUST00000005509 ErbinQ80TH2 1402 aa27.59■■■□□ 2.01
Stx1a-201ENSMUST00000005509 Txndc2Q6P902 515 aa27.58■■■□□ 2.01
Stx1a-201ENSMUST00000005509 P3h3Q8CG70 732 aa27.57■■■□□ 2
Stx1a-201ENSMUST00000005509 Pik3c2gO70167 1506 aa27.57■■■□□ 2
Stx1a-201ENSMUST00000005509 Naip7Q9JIB3 1402 aa27.55■■■□□ 2
Stx1a-201ENSMUST00000005509 AatkQ80YE4 1365 aa27.54■■■□□ 2
Stx1a-201ENSMUST00000005509 Scaf11E9PZM7 1456 aaKnown RBP27.53■■■□□ 2
Stx1a-201ENSMUST00000005509 Dot1lQ6XZL8 1540 aa27.53■■■□□ 2
Stx1a-201ENSMUST00000005509 Abca8aQ8K442 1620 aa27.52■■■□□ 2
Stx1a-201ENSMUST00000005509 Rimbp3Q3V0F0 1606 aa27.52■■■□□ 2
Stx1a-201ENSMUST00000005509 Hspa5P20029 655 aaKnown RBP27.52■■■□□ 2
Stx1a-201ENSMUST00000005509 Ehbp1l1Q99MS7 1716 aa27.5■■□□□ 1.99
Stx1a-201ENSMUST00000005509 Prrc2bQ7TPM1 1486 aaKnown RBP27.5■■□□□ 1.99
Stx1a-201ENSMUST00000005509 Ankrd36D3Z4K0 1415 aa27.5■■□□□ 1.99
Stx1a-201ENSMUST00000005509 Kdm5aQ3UXZ9 1690 aa27.48■■□□□ 1.99
Stx1a-201ENSMUST00000005509 Uggt1Q6P5E4 1551 aa27.48■■□□□ 1.99
Stx1a-201ENSMUST00000005509 Mroh3A0A1D5RM54 893 aa27.48■■□□□ 1.99
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms