RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Asxl1P59598 1514 aa25.43■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Grwd1Q810D6 446 aaKnown RBP25.42■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Rock1P70335 1354 aa25.42■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Jph4Q80WT0 628 aa25.39■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Ofd1Q80Z25 1017 aa25.39■■□□□ 1.66
Shkbp1-201ENSMUST00000003857 Gm32742A0A1B0GT42 1604 aa25.39■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Mast1Q9R1L5 1570 aa25.38■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Ssh2Q5SW75 1423 aa25.38■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Tubgcp6G5E8P0 1769 aa25.37■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Setd1aE9PYH6 1716 aa25.37■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Gapvd1Q6PAR5 1458 aa25.37■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Rnf17Q99MV7 1640 aa25.33■■□□□ 1.65
Shkbp1-201ENSMUST00000003857 Eif4g3Q80XI3 1579 aaKnown RBP25.32■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Pdcd11Q6NS46 1862 aaKnown RBP25.32■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Neurl4Q5NCX5 1563 aa25.31■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Kdm5cP41230 1554 aa25.31■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 L3mbtl2P59178 703 aa25.3■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Arhgap5P97393 1501 aa25.29■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Fkbp15Q6P9Q6 1216 aaKnown RBP25.29■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Clstn2Q9ER65 966 aa25.29■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Pelp1Q9DBD5 1123 aaKnown RBP25.29■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Liat1Q810M6 228 aa25.27■■□□□ 1.64
Shkbp1-201ENSMUST00000003857 Atp7aQ64430 1491 aa25.26■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Trappc8E9PWG2 1437 aa25.25■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Cd109Q8R422 1442 aa25.25■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Rrp7aQ9D1C9 280 aaKnown RBP25.24■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Cfap74Q3UY96 1578 aa25.24■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Hecw1Q8K4P8 1604 aa25.24■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Tarbp1E9Q368 1579 aa25.23■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Ppip5k1A2ARP1 1436 aa25.22■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 AknaQ80VW7 1404 aa25.21■■□□□ 1.63
Shkbp1-201ENSMUST00000003857 Kank1E9Q238 1360 aa25.19■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Rpgrip1lQ8CG73 1264 aa25.18■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Pak3Q61036 559 aa25.17■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Fgd6Q69ZL1 1399 aa25.16■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Sart1Q9Z315 806 aaKnown RBP25.16■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Kiaa1210E9Q0C6 1637 aa25.16■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Cdc42bpbQ7TT50 1713 aa25.15■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Zbtb7cQ8VCZ7 619 aa25.15■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Adamts13Q769J6 1426 aa25.15■■□□□ 1.62
Shkbp1-201ENSMUST00000003857 Zmym4A2A791 1549 aaKnown RBP25.14■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Abcc3B2RX12 1523 aa25.13■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Robo2Q7TPD3 1470 aa25.13■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Erbb3Q61526 1339 aa25.13■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 NhsB1AV60 1647 aa25.13■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Zscan21Q07231 555 aa25.12■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Anp32bQ9EST5 272 aaKnown RBP25.12■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Cep170Q6A065 1588 aa25.11■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Egfem1Q8C088 590 aa25.11■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Ttbk1Q6PCN3 1308 aa25.11■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Mink1Q9JM52 1308 aa25.1■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Plch2A2AP18 1501 aa25.09■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Gm14025A2AP89 1413 aa25.09■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Kcnh8P59111 1102 aa25.09■■□□□ 1.61
Shkbp1-201ENSMUST00000003857 Slc4a3P16283 1227 aa25.08■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Mak16Q8BGS0 296 aaKnown RBP25.08■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Zfp444Q3TDV8 331 aaKnown RBP25.07■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 AI481877A2ALV5 1481 aa25.07■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Tcerg1Q8CGF7 1100 aaKnown RBP25.05■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 PrxO55103 1391 aa25.05■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Ifit1bl1D3Z6F0 470 aa25.05■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Q7TT23 1179 aa25.05■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Spag9Q58A65 1321 aaKnown RBP25.04■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Edc4Q3UJB9 1406 aaKnown RBP25.03■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Zbtb4Q5F293 982 aa25.02■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Prdm16A2A935 1275 aa25.02■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Abca8bQ8K440 1620 aa25.02■■□□□ 1.6
Shkbp1-201ENSMUST00000003857 Upf2A2AT37 1269 aaKnown RBP25.01■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Pank3Q8R2W9 370 aa25.01■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Tulp4Q9JIL5 1547 aa25.01■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Kif1bQ60575 1816 aaKnown RBP25■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Abca17E9PX95 1733 aa25■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 ShprhQ7TPQ3 1674 aa25■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Tex14Q7M6U3 1450 aa24.99■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Usp54Q8BL06 1588 aaKnown RBP24.98■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Pde4cQ3UEI1 686 aa24.98■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Chd1P40201 1711 aa24.98■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Sbno1Q689Z5 1390 aa24.97■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Inpp5dQ9ES52 1191 aa24.96■■□□□ 1.59
Shkbp1-201ENSMUST00000003857 Kidins220E9Q9B7 1793 aa24.94■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Zscan10Q3URR7 782 aa24.94■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Arid4bA2CG63 1314 aaKnown RBP24.94■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Nsd2Q8BVE8 1365 aa24.93■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Bcl11aQ9QYE3 773 aa24.92■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Pola1P33609 1465 aa24.92■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Mroh3A0A1D5RM54 893 aa24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Hdac5Q9Z2V6 1113 aa24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Map3k5O35099 1380 aa24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Xrn1P97789 1719 aaKnown RBP24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Abcc1O35379 1528 aa24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Atp10dQ8K2X1 1416 aa24.91■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 TnikP83510 1323 aa24.9■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Prkrip1Q9CWV6 186 aaKnown RBP24.9■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Tmf1B9EKI3 1091 aa24.9■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Ak9G3UYQ4 1894 aa24.9■■□□□ 1.58
Shkbp1-201ENSMUST00000003857 Ipo9Q91YE6 1041 aa24.88■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Gm16486A0A1D5RMD1 1434 aa24.88■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Uggt2E9Q4X2 1504 aa24.88■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Abcc6Q9R1S7 1498 aa24.88■■□□□ 1.57
Shkbp1-201ENSMUST00000003857 Clasp1Q80TV8 1535 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 22,080 RNA–protein pairs in 12.7 ms