RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 NefmP08553 848 aa21.63■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Lamc1P02468 1607 aaKnown RBP21.63■■□□□ 1.05
Ercc1-201ENSMUST00000003645 NpatQ8BMA5 1420 aa21.63■■□□□ 1.05
Ercc1-201ENSMUST00000003645 ShprhQ7TPQ3 1674 aa21.63■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Uggt2E9Q4X2 1504 aa21.62■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Cul9Q80TT8 1865 aa21.62■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Ankrd36D3Z4K0 1415 aa21.62■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Trpm1Q2TV84 1622 aa21.62■■□□□ 1.05
Ercc1-201ENSMUST00000003645 PtprgQ05909 1442 aa21.6■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Zbtb7cQ8VCZ7 619 aa21.6■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Robo2Q7TPD3 1470 aa21.59■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Qser1A2BIE1 1698 aa21.58■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Kif14L0N7N1 1674 aaKnown RBP21.58■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Asxl1P59598 1514 aa21.58■■□□□ 1.05
Ercc1-201ENSMUST00000003645 Supt6hQ62383 1726 aaKnown RBP21.55■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Kif1bQ60575 1816 aaKnown RBP21.55■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Kif21bQ9QXL1 1668 aa21.54■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Eid3Q3V124 375 aa21.54■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Trak1Q6PD31 939 aa21.54■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Myo5cE9Q1F5 1742 aa21.53■■□□□ 1.04
Ercc1-201ENSMUST00000003645 Hnrnpul2Q00PI9 745 aaKnown RBP21.51■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Naip5Q9R016 1403 aa21.5■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Pkd2O35245 966 aa21.5■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Adamtsl3G3UXC7 1706 aa21.5■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Cd109Q8R422 1442 aa21.5■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Myom3A2ABU4 1439 aa21.49■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Plppr3Q7TPB0 716 aa21.48■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Camsap2Q8C1B1 1461 aa21.48■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Ylpm1Q9R0I7 1386 aaKnown RBP21.48■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Cfap65Q3V0B4 1847 aa21.48■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Nsd2Q8BVE8 1365 aa21.47■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Rpgrip1Q9EPQ2 1331 aa21.47■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Rsph4aQ8BYM7 716 aa21.46■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Abca6Q8K441 1624 aa21.46■■□□□ 1.03
Ercc1-201ENSMUST00000003645 Tmem131lQ3U3D7 1597 aa21.45■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Ttc21bQ0HA38 1315 aa21.44■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Afap1Q80YS6 731 aa21.44■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Prex1Q69ZK0 1650 aa21.44■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Dhx9O70133 1380 aaKnown RBP21.44■■□□□ 1.02
Ercc1-201ENSMUST00000003645 AnkarA2RT91 1465 aa21.43■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Atp7aQ64430 1491 aa21.42■■□□□ 1.02
Ercc1-201ENSMUST00000003645 Alpk3Q924C5 1678 aa21.4■■□□□ 1.02
Ercc1-201ENSMUST00000003645 DroshaQ5HZJ0 1373 aaKnown RBP21.38■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Hspa5P20029 655 aaKnown RBP21.38■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Pik3c2gO70167 1506 aa21.37■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Adamts7Q68SA9 1657 aa21.37■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Rprd2Q6NXI6 1469 aaKnown RBP21.35■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Edc4Q3UJB9 1406 aaKnown RBP21.35■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Arhgap23Q69ZH9 1483 aa21.34■■□□□ 1.01
Ercc1-201ENSMUST00000003645 Usp47Q8BY87 1376 aa21.32■■□□□ 1
Ercc1-201ENSMUST00000003645 Myom2Q14BI5 1463 aa21.31■■□□□ 1
Ercc1-201ENSMUST00000003645 Talpid3E9PV87 1520 aa21.31■■□□□ 1
Ercc1-201ENSMUST00000003645 Tarbp1E9Q368 1579 aa21.31■■□□□ 1
Ercc1-201ENSMUST00000003645 CltcQ68FD5 1675 aaKnown RBP21.31■■□□□ 1
Ercc1-201ENSMUST00000003645 TonslQ6NZL6 1363 aa21.31■■□□□ 1
Ercc1-201ENSMUST00000003645 Hdac5Q9Z2V6 1113 aa21.3■■□□□ 1
Ercc1-201ENSMUST00000003645 Ppip5k1A2ARP1 1436 aa21.3■■□□□ 1
Ercc1-201ENSMUST00000003645 Hfm1D3Z4R1 1434 aa21.3■■□□□ 1
Ercc1-201ENSMUST00000003645 Dot1lQ6XZL8 1540 aa21.3■■□□□ 1
Ercc1-201ENSMUST00000003645 RictorQ6QI06 1708 aa21.29■■□□□ 1
Ercc1-201ENSMUST00000003645 Tecpr2Q3UH45 1423 aa21.29■■□□□ 1
Ercc1-201ENSMUST00000003645 Knl1Q66JQ7 1612 aa21.28■■□□□ 1
Ercc1-201ENSMUST00000003645 Safb2Q80YR5 991 aaKnown RBP21.28■■□□□ 1
Ercc1-201ENSMUST00000003645 Akap12Q9WTQ5 1684 aa21.28■■□□□ 1
Ercc1-201ENSMUST00000003645 Rock1P70335 1354 aa21.27■■□□□ 1
Ercc1-201ENSMUST00000003645 Iqgap3F8VQ29 1632 aa21.26■□□□□ 0.99
Ercc1-201ENSMUST00000003645 Ino80Q6ZPV2 1559 aa21.24■□□□□ 0.99
Ercc1-201ENSMUST00000003645 Med14A2ABV5 1459 aaKnown RBP21.24■□□□□ 0.99
Ercc1-201ENSMUST00000003645 Erich6D3Z6S9 713 aa21.2■□□□□ 0.98
Ercc1-201ENSMUST00000003645 MlecQ6ZQI3 291 aaKnown RBP21.19■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Washc2Q6PGL7 1334 aa21.18■□□□□ 0.98
Ercc1-201ENSMUST00000003645 ErbinQ80TH2 1402 aa21.18■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Abca8aQ8K442 1620 aa21.17■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Skint5A7XUY5 1461 aa21.17■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Sall3Q62255 1320 aa21.16■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Stk24Q99KH8 431 aa21.15■□□□□ 0.98
Ercc1-201ENSMUST00000003645 AatkQ80YE4 1365 aa21.14■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Rgl3Q3UYI5 709 aa21.14■□□□□ 0.98
Ercc1-201ENSMUST00000003645 Efcab6Q6P1E8 1516 aa21.14■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Adgrb3Q80ZF8 1522 aa21.14■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Dip2bQ3UH60 1574 aa21.14■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Uggt1Q6P5E4 1551 aa21.14■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Abcc6Q9R1S7 1498 aa21.14■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Ahdc1Q6PAL7 1594 aaKnown RBP21.13■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Prdm2A2A7B5 1709 aaKnown RBP21.1■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Mroh3A0A1D5RM54 893 aa21.1■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Gm13697A2AK42 830 aa21.1■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Ercc6l2Q9JIM3 1537 aa21.09■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Adamts13Q769J6 1426 aa21.09■□□□□ 0.97
Ercc1-201ENSMUST00000003645 Bcl9Q9D219 1425 aa21.09■□□□□ 0.97
Ercc1-201ENSMUST00000003645 MyclP10166 368 aa21.08■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Mroh1E0CZ22 1640 aa21.07■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Ehbp1l1Q99MS7 1716 aa21.07■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Las1lA2BE28 776 aaKnown RBP21.07■□□□□ 0.96
Ercc1-201ENSMUST00000003645 4930407I10RikD3Z5T8 1512 aa21.06■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Itsn1Q9Z0R4 1714 aa21.04■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Tulp4Q9JIL5 1547 aa21.03■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Mbd5B1AYB6 1498 aa21.03■□□□□ 0.96
Ercc1-201ENSMUST00000003645 PtprmP28828 1452 aa21.02■□□□□ 0.96
Ercc1-201ENSMUST00000003645 Naip7Q9JIB3 1402 aa21.02■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms