RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C SSE1P32589 693 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C YHR177WP38867 453 aa1.85□□□□□ -2.11
VPS35YJL154C AIP1P46680 615 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C CLD1P53264 445 aa1.85□□□□□ -2.11
VPS35YJL154C YNL143CP53908 130 aa1.85□□□□□ -2.11
VPS35YJL154C REX2P54964 269 aaKnown RBP1.85□□□□□ -2.11
VPS35YJL154C SPH1Q06160 661 aa1.85□□□□□ -2.11
VPS35YJL154C ARR1Q06596 294 aa1.85□□□□□ -2.11
VPS35YJL154C IZH2Q12442 317 aa1.85□□□□□ -2.11
VPS35YJL154C RDS1P25611 832 aa1.84□□□□□ -2.11
VPS35YJL154C PHA2P32452 334 aa1.84□□□□□ -2.11
VPS35YJL154C UIP5P36137 443 aa1.84□□□□□ -2.11
VPS35YJL154C YHK8P38776 514 aa1.84□□□□□ -2.11
VPS35YJL154C CTM1P38818 585 aa1.84□□□□□ -2.11
VPS35YJL154C PEX18P38855 283 aa1.84□□□□□ -2.11
VPS35YJL154C REE1P40893 198 aa1.84□□□□□ -2.11
VPS35YJL154C AGX1P43567 385 aa1.84□□□□□ -2.11
VPS35YJL154C FYV8P46949 817 aaKnown RBP1.84□□□□□ -2.11
VPS35YJL154C PDR16P53860 351 aaKnown RBP1.84□□□□□ -2.11
VPS35YJL154C ERV25P54837 211 aaKnown RBP1.84□□□□□ -2.11
VPS35YJL154C YMR111CQ04461 462 aaPredicted RBP1.84□□□□□ -2.11
VPS35YJL154C LIP2Q06005 328 aa1.84□□□□□ -2.11
VPS35YJL154C FSH3Q99369 266 aa1.84□□□□□ -2.11
VPS35YJL154C TRF5P48561 642 aaKnown RBP1.84□□□□□ -2.12
VPS35YJL154C SMP3Q04174 516 aa1.84□□□□□ -2.12
VPS35YJL154C AIM33Q04516 312 aa1.84□□□□□ -2.12
VPS35YJL154C PML1Q07930 204 aaPredicted RBP1.84□□□□□ -2.12
VPS35YJL154C RRG7Q08774 242 aaPredicted RBP1.84□□□□□ -2.12
VPS35YJL154C RGS2Q99188 309 aa1.84□□□□□ -2.12
VPS35YJL154C YLL053CP0CD98 152 aa1.83□□□□□ -2.12
VPS35YJL154C RPS8AP0CX39 200 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C RPS8BP0CX40 200 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C OM45P16547 393 aa1.83□□□□□ -2.12
VPS35YJL154C RPB4P20433 221 aaPredicted RBP1.83□□□□□ -2.12
VPS35YJL154C DBR1P24309 405 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C KAR9P32526 644 aa1.83□□□□□ -2.12
VPS35YJL154C CSE2P33308 149 aa1.83□□□□□ -2.12
VPS35YJL154C COY1P34237 679 aa1.83□□□□□ -2.12
VPS35YJL154C PTK1P36002 662 aaPredicted RBP1.83□□□□□ -2.12
VPS35YJL154C GPX2P38143 162 aa1.83□□□□□ -2.12
VPS35YJL154C YJR085CP47131 105 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C MST27P53176 234 aa1.83□□□□□ -2.12
VPS35YJL154C HOP2P53187 214 aa1.83□□□□□ -2.12
VPS35YJL154C UTP6Q02354 440 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C MRPL35Q06678 367 aa1.83□□□□□ -2.12
VPS35YJL154C YPR091CQ06833 770 aa1.83□□□□□ -2.12
VPS35YJL154C RFS1P38234 210 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C SPT8P38915 602 aa1.83□□□□□ -2.12
VPS35YJL154C DFG10P40526 253 aa1.83□□□□□ -2.12
VPS35YJL154C YHC3P47040 408 aa1.83□□□□□ -2.12
VPS35YJL154C YJR030CP47101 745 aa1.83□□□□□ -2.12
VPS35YJL154C NUP84P52891 726 aa1.83□□□□□ -2.12
VPS35YJL154C YGL114WP53134 725 aa1.83□□□□□ -2.12
VPS35YJL154C YNL247WP53852 767 aaKnown RBP1.83□□□□□ -2.12
VPS35YJL154C TDA1Q03533 586 aa1.83□□□□□ -2.12
VPS35YJL154C GGA1Q06336 557 aa1.83□□□□□ -2.12
VPS35YJL154C TMS1Q12116 473 aa1.83□□□□□ -2.12
VPS35YJL154C AAT2P23542 418 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C ACP1P32463 125 aa1.82□□□□□ -2.12
VPS35YJL154C YEL045CP32616 141 aa1.82□□□□□ -2.12
VPS35YJL154C SKI2P35207 1287 aaKnown RBP RIP-Chip data1.82□□□□□ -2.12not detected
VPS35YJL154C RTC2P38279 296 aa1.82□□□□□ -2.12
VPS35YJL154C AIM10P39965 576 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C SPG5P42933 373 aa1.82□□□□□ -2.12
VPS35YJL154C RPN14P53196 417 aa1.82□□□□□ -2.12
VPS35YJL154C YGR266WP53326 701 aa1.82□□□□□ -2.12
VPS35YJL154C RET3P53600 189 aa1.82□□□□□ -2.12
VPS35YJL154C RRN5Q02983 363 aa1.82□□□□□ -2.12
VPS35YJL154C SNZ1Q03148 297 aa1.82□□□□□ -2.12
VPS35YJL154C YOL075CQ08234 1294 aa1.82□□□□□ -2.12
VPS35YJL154C FCY22Q12119 530 aa1.82□□□□□ -2.12
VPS35YJL154C PSY3Q12318 242 aa1.82□□□□□ -2.12
VPS35YJL154C WTM1Q12363 437 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C NAG1Q8TGN9 163 aa1.82□□□□□ -2.12
VPS35YJL154C YOR338WQ99326 363 aa1.82□□□□□ -2.12
VPS35YJL154C RPB5P20434 215 aa1.82□□□□□ -2.12
VPS35YJL154C RPL16AP26784 199 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C RME1P32338 300 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C RBG1P39729 369 aa1.82□□□□□ -2.12
VPS35YJL154C OXA1P39952 402 aa1.82□□□□□ -2.12
VPS35YJL154C NAS2P40555 220 aa1.82□□□□□ -2.12
VPS35YJL154C TOS2P50078 622 aa1.82□□□□□ -2.12
VPS35YJL154C SHE4P51534 789 aa1.82□□□□□ -2.12
VPS35YJL154C SDT1P53078 280 aa1.82□□□□□ -2.12
VPS35YJL154C LSB1P53281 241 aa1.82□□□□□ -2.12
VPS35YJL154C CMS1Q07897 291 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C URB1P34241 1764 aaKnown RBP1.82□□□□□ -2.12
VPS35YJL154C MAS2P11914 482 aa1.81□□□□□ -2.12
VPS35YJL154C NTG1P31378 399 aa1.81□□□□□ -2.12
VPS35YJL154C KRE6P32486 720 aa1.81□□□□□ -2.12
VPS35YJL154C ALP1P38971 573 aa1.81□□□□□ -2.12
VPS35YJL154C SMC2P38989 1170 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C CRH1P53301 507 aa1.81□□□□□ -2.12
VPS35YJL154C PRO2P54885 456 aaKnown RBP1.81□□□□□ -2.12
VPS35YJL154C YMR027WQ04371 470 aa1.81□□□□□ -2.12
VPS35YJL154C YDL114WQ07530 308 aa1.81□□□□□ -2.12
VPS35YJL154C TLG2Q08144 397 aa1.81□□□□□ -2.12
VPS35YJL154C HRT3Q12347 344 aa1.81□□□□□ -2.12
VPS35YJL154C REV1P12689 985 aa1.81□□□□□ -2.12
VPS35YJL154C DBP3P20447 523 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 21.9 ms