RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C FLC3P53121 802 aa3.09□□□□□ -1.92
CDC40YDR364C USE1P53146 245 aa3.09□□□□□ -1.92
CDC40YDR364C EFM5P53200 248 aaKnown RBP3.09□□□□□ -1.92
CDC40YDR364C CUS2P53830 285 aaPredicted RBP3.09□□□□□ -1.92
CDC40YDR364C IBD2P53892 351 aa3.09□□□□□ -1.92
CDC40YDR364C EGD1Q02642 157 aaKnown RBP3.09□□□□□ -1.92
CDC40YDR364C YDR541CQ03049 344 aa3.09□□□□□ -1.92
CDC40YDR364C TAF12Q03761 539 aa3.09□□□□□ -1.92
CDC40YDR364C PDR8Q06149 701 aa3.09□□□□□ -1.92
CDC40YDR364C YLR413WQ06689 675 aa3.09□□□□□ -1.92
CDC40YDR364C MCH4Q08268 501 aa3.09□□□□□ -1.92
CDC40YDR364C RDR1Q08904 546 aa3.09□□□□□ -1.92
CDC40YDR364C CRC1Q12289 327 aa3.09□□□□□ -1.92
CDC40YDR364C MRPL23Q12487 163 aaPredicted RBP3.09□□□□□ -1.92
CDC40YDR364C RMD5Q12508 421 aa3.09□□□□□ -1.92
CDC40YDR364C BRR1Q99177 341 aaPredicted RBP3.09□□□□□ -1.92
CDC40YDR364C TOR1P35169 2470 aa3.08□□□□□ -1.92
CDC40YDR364C VPS63O13549 108 aa3.08□□□□□ -1.92
CDC40YDR364C CBP2P03874 630 aaPredicted RBP3.08□□□□□ -1.92
CDC40YDR364C GCD2P12754 651 aaPredicted RBP3.08□□□□□ -1.92
CDC40YDR364C RPB8P20436 146 aa3.08□□□□□ -1.92
CDC40YDR364C SGV1P23293 657 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C TIP20P33891 701 aa3.08□□□□□ -1.92
CDC40YDR364C SIP2P34164 415 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C SKT5P34226 696 aa3.08□□□□□ -1.92
CDC40YDR364C RRN10P38204 145 aa3.08□□□□□ -1.92
CDC40YDR364C YHR210CP38893 341 aa3.08□□□□□ -1.92
CDC40YDR364C DHH1P39517 506 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C YHB1P39676 399 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C ERV46P39727 415 aa3.08□□□□□ -1.92
CDC40YDR364C SER33P40510 469 aa3.08□□□□□ -1.92
CDC40YDR364C CIN1P40987 1014 aa3.08□□□□□ -1.92
CDC40YDR364C YJR154WP47181 346 aa3.08□□□□□ -1.92
CDC40YDR364C TOM22P49334 152 aa3.08□□□□□ -1.92
CDC40YDR364C MPS2P53159 387 aa3.08□□□□□ -1.92
CDC40YDR364C CLD1P53264 445 aa3.08□□□□□ -1.92
CDC40YDR364C SHY1P53266 389 aa3.08□□□□□ -1.92
CDC40YDR364C FRE4P53746 719 aa3.08□□□□□ -1.92
CDC40YDR364C IMP4P53941 290 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C SLM2P53955 656 aa3.08□□□□□ -1.92
CDC40YDR364C REX2P54964 269 aaKnown RBP3.08□□□□□ -1.92
CDC40YDR364C TIM11P81449 96 aaPredicted RBP3.08□□□□□ -1.92
CDC40YDR364C RRN5Q02983 363 aa3.08□□□□□ -1.92
CDC40YDR364C YDR476CQ03362 224 aa3.08□□□□□ -1.92
CDC40YDR364C EKI1Q03764 534 aa3.08□□□□□ -1.92
CDC40YDR364C SMA2Q04658 369 aa3.08□□□□□ -1.92
CDC40YDR364C RIF2Q06208 395 aa3.08□□□□□ -1.92
CDC40YDR364C POS5Q06892 414 aa3.08□□□□□ -1.92
CDC40YDR364C CLP1Q08685 445 aaPredicted RBP3.08□□□□□ -1.92
CDC40YDR364C PER33Q12144 273 aa3.08□□□□□ -1.92
CDC40YDR364C NCE102Q12207 173 aaRIP-Chip data3.08□□□□□ -1.92not detected
CDC40YDR364C ATG34Q12292 412 aa3.08□□□□□ -1.92
CDC40YDR364C GTT2Q12390 233 aa3.08□□□□□ -1.92
CDC40YDR364C YPL247CQ12523 523 aa3.08□□□□□ -1.92
CDC40YDR364C YDR034W-BQ6Q5X2 51 aa3.08□□□□□ -1.92
CDC40YDR364C SRN2Q99176 213 aa3.08□□□□□ -1.92
CDC40YDR364C YOR338WQ99326 363 aa3.08□□□□□ -1.92
CDC40YDR364C LAA1P39526 2014 aa3.08□□□□□ -1.92
CDC40YDR364C MES1P00958 751 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C COS2P0CX12 379 aa3.07□□□□□ -1.92
CDC40YDR364C COS3P0CX13 379 aa3.07□□□□□ -1.92
CDC40YDR364C SEC63P14906 663 aa3.07□□□□□ -1.92
CDC40YDR364C TYR1P20049 452 aa3.07□□□□□ -1.92
CDC40YDR364C URE2P23202 354 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C CLB2P24869 491 aa3.07□□□□□ -1.92
CDC40YDR364C SPS22P25380 463 aa3.07□□□□□ -1.92
CDC40YDR364C BUB2P26448 306 aaPredicted RBP3.07□□□□□ -1.92
CDC40YDR364C SIN4P32259 974 aa3.07□□□□□ -1.92
CDC40YDR364C COX13P32799 129 aa3.07□□□□□ -1.92
CDC40YDR364C PRP18P33411 251 aaPredicted RBP3.07□□□□□ -1.92
CDC40YDR364C MSN2P33748 704 aa3.07□□□□□ -1.92
CDC40YDR364C YUH1P35127 236 aa3.07□□□□□ -1.92
CDC40YDR364C MED8P38304 223 aa3.07□□□□□ -1.92
CDC40YDR364C ARP1P38696 384 aa3.07□□□□□ -1.92
CDC40YDR364C RRP4P38792 359 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C TRM5P38793 499 aa3.07□□□□□ -1.92
CDC40YDR364C TIM17P39515 158 aa3.07□□□□□ -1.92
CDC40YDR364C SSO2P39926 295 aa3.07□□□□□ -1.92
CDC40YDR364C RPH1P39956 796 aa3.07□□□□□ -1.92
CDC40YDR364C VRG4P40107 337 aa3.07□□□□□ -1.92
CDC40YDR364C YIL060WP40519 144 aa3.07□□□□□ -1.92
CDC40YDR364C COS4P43542 379 aa3.07□□□□□ -1.92
CDC40YDR364C GLG2P47011 380 aa3.07□□□□□ -1.92
CDC40YDR364C ILM1P47155 203 aa3.07□□□□□ -1.92
CDC40YDR364C LYS20P48570 428 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C IMD3P50095 523 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C SWC4P53201 476 aa3.07□□□□□ -1.92
CDC40YDR364C GTR2P53290 341 aa3.07□□□□□ -1.92
CDC40YDR364C YIF1P53845 314 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C YNL010WP53981 241 aaKnown RBP3.07□□□□□ -1.92
CDC40YDR364C YET2Q04210 160 aa3.07□□□□□ -1.92
CDC40YDR364C RNH1Q04740 348 aa3.07□□□□□ -1.92
CDC40YDR364C FAR10Q06001 478 aa3.07□□□□□ -1.92
CDC40YDR364C BCP1Q06338 283 aa3.07□□□□□ -1.92
CDC40YDR364C YPR202WQ08993 238 aa3.07□□□□□ -1.92
CDC40YDR364C SAS5Q99314 248 aa3.07□□□□□ -1.92
CDC40YDR364C SUC2P00724 532 aa3.06□□□□□ -1.92
CDC40YDR364C SCEIP03882 235 aa3.06□□□□□ -1.92
CDC40YDR364C RPS14AP06367 137 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C RAD52P06778 471 aaKnown RBP3.06□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 242.6 ms