RNA–Protein interactions for RNA: YAL004W

YAL004W, Transcript of Dubious open reading frame, yeast

Gene YAL004W, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YAL004W	YAL004W	MIG2	P53035	382 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	BUD17	P53727	317 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	STP1	Q00947	519 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	AAT1	Q01802	451 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	MSC1	Q03104	513 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	SNU56	Q03782	492 aa	Known RBP	3.41	□□□□□ -1.86
YAL004W	YAL004W	EMI2	Q04409	500 aa	Known RBP	3.41	□□□□□ -1.86
YAL004W	YAL004W	TMN2	Q04562	672 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	COQ11	Q05892	277 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	MDM30	Q05930	598 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	BUR2	Q05949	395 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	GRS2	Q06817	618 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	YOL159C	Q08300	171 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	SLF1	Q12034	447 aa	Known RBP	3.41	□□□□□ -1.86
YAL004W	YAL004W	SRO7	Q12038	1033 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	DAP1	Q12091	152 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	YRA1	Q12159	226 aa	Known RBP	3.41	□□□□□ -1.86
YAL004W	YAL004W	YOR029W	Q12243	111 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	SUT2	Q12286	268 aa		3.41	□□□□□ -1.86
YAL004W	YAL004W	PRP46	Q12417	451 aa	Predicted RBP	3.41	□□□□□ -1.86
YAL004W	YAL004W	MYO1	P08964	1928 aa		3.4	□□□□□ -1.86
YAL004W	YAL004W	COX2	P00410	251 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	RHO1	P06780	209 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	GDH1	P07262	454 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	RPL27A	P0C2H6	136 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	RPL27B	P0C2H7	136 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	SSC1	P0CS90	654 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	3.4	□□□□□ -1.87	not detected
YAL004W	YAL004W	SEC63	P14906	663 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	EXO70	P19658	623 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	URA10	P30402	227 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	MSK1	P32048	576 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	CYS4	P32582	507 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	SOR1	P35497	357 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	VPS51	P36116	164 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	RIM2	P38127	377 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YBR053C	P38235	358 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	FZO1	P38297	855 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	RRP4	P38792	359 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	FHL1	P39521	936 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YAT2	P40017	923 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	LAS21	P40367	830 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YRB1	P41920	201 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	YAR1	P46683	200 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	ILM1	P47155	203 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YDL186W	P48568	277 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	AZR1	P50080	613 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YIP4	P53093	235 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YGR067C	P53243	804 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	COG2	P53271	262 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	ELP3	Q02908	557 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	GMC2	Q06201	188 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	VPS74	Q06385	345 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YET3	Q07451	203 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	YDL086W	Q07505	273 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	SOR2	Q07786	357 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	THP1	Q08231	455 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	PKH2	Q12236	1081 aa	Known RBP	3.4	□□□□□ -1.87
YAL004W	YAL004W	FRE7	Q12333	620 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	TRM13	Q12383	476 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	RGS2	Q99188	309 aa		3.4	□□□□□ -1.87
YAL004W	YAL004W	TEF1	P02994	458 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	HAP2	P06774	265 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	RAD7	P06779	565 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	YAK1	P14680	807 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	MET16	P18408	261 aa	Predicted RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	ATP10	P18496	279 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	DBR1	P24309	405 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	ATP7	P30902	174 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	TKL2	P33315	681 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	SIP2	P34164	415 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	COS9	P36034	407 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	DOA1	P36037	715 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	LDB7	P38210	180 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	VBA2	P38358	474 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	SBE22	P38814	852 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	ANS1	P38832	159 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	PFS1	P38872	237 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	SEC72	P39742	193 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	YEL020C	P39994	560 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	RIO2	P40160	425 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	YIL001W	P40560	513 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	RRT5	P43607	289 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	YGR168C	P53293	376 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	BIO4	P53630	237 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	RSM23	Q01163	450 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	YMR178W	Q03219	274 aa	Known RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	IZH1	Q03419	316 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	YLR040C	Q07988	224 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	THI20	Q08224	551 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	OSW1	Q08692	278 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	GPM2	Q12008	311 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	YLR053C	Q12026	108 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	LCB4	Q12246	624 aa		3.39	□□□□□ -1.87
YAL004W	YAL004W	BRR1	Q99177	341 aa	Predicted RBP	3.39	□□□□□ -1.87
YAL004W	YAL004W	GAL4	P04386	881 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	DST1	P07273	309 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	STE18	P18852	110 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	UTR1	P21373	530 aa		3.38	□□□□□ -1.87
YAL004W	YAL004W	CMK2	P22517	447 aa		3.38	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms