RNA–Protein interactions for RNA: ENST00000613121.1

IGHV3-41-201, Transcript of immunoglobulin heavy variable 3-41 (pseudogene), humanhuman

BASIC

Gene IGHV3-41, Length 348 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-41-201ENST00000613121 SYT1P21579 422 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 IGFBP4P22692 258 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 CCT6AP40227 531 aaKnown RBP20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 TAP1Q03518 808 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 EMC2Q15006 297 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 FAM43BQ6ZT52 329 aaPredicted RBP20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 BRAPQ7Z569 592 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 FAM228AQ86W67 206 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 KSR1Q8IVT5 923 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 PRPF31Q8WWY3 499 aaKnown RBP20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 ARNTL2Q8WYA1 636 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 NLRP4Q96MN2 994 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 ADAM2Q99965 735 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 FDXACB1Q9BRP7 624 aaPredicted RBP20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 INO80BQ9C086 356 aaPredicted RBP20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 TMX1Q9H3N1 280 aa20.15■□□□□ 0.82
IGHV3-41-201ENST00000613121 GAS2O43903 313 aaKnown RBP20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 CSDE1O75534 798 aaKnown RBP20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 DGAT1O75907 488 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 STAG3L1P0CL83 205 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 SRGAP2CP0DJJ0 459 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 DARSP14868 501 aaKnown RBP20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 RPA1P27694 616 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 KRT79Q5XKE5 535 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 PSPC1Q8WXF1 523 aaKnown RBP20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 TSPYL2Q9H2G4 693 aaPredicted RBP20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 PCDHB7Q9Y5E2 793 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 COL4A3BPQ9Y5P4 624 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 LAMA3Q16787 3333 aa20.14■□□□□ 0.81
IGHV3-41-201ENST00000613121 ASAP2O43150 1006 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 FGFR4P22455 802 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 PRPHP41219 470 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 RARRES1P49788 294 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 HTRA4P83105 476 aaPredicted RBP20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 ZNF410Q86VK4 478 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 SNX29Q8TEQ0 813 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 LINC01599Q8WXQ3 324 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 ATP6V0A4Q9HBG4 840 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 RGS18Q9NS28 235 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 C1orf112Q9NSG2 853 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 RNF216Q9NWF9 866 aaPredicted RBP20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 MTUS1Q9ULD2 1270 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 TANC1Q9C0D5 1861 aa20.13■□□□□ 0.81
IGHV3-41-201ENST00000613121 RFXAPO00287 272 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 MGEA5O60502 916 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 ARHGEF15O94989 841 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 ZRSR1Q15695 479 aaKnown RBP20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 POTEGQ6S5H5 508 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 SLC24A5Q71RS6 500 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 MAEAQ7L5Y9 396 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 TGS1Q96RS0 853 aaKnown RBP20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 KIAA1024Q9UPX6 916 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 KAT6AQ92794 2004 aa20.12■□□□□ 0.81
IGHV3-41-201ENST00000613121 LINC01553A4QN01 128 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 ARHGEF35A5YM69 484 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 VWA3AA6NCI4 1184 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 USO1O60763 962 aaKnown RBP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 MUTP22033 750 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 SFPQP23246 707 aaKnown RBP eCLIP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 SARSP49591 514 aaKnown RBP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 ATP2C1P98194 919 aaPredicted RBP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 LAMTOR4Q0VGL1 99 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 BTG3Q14201 252 aaPredicted RBP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 IL17AQ16552 155 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 NPAS4Q8IUM7 802 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 FIBCD1Q8N539 461 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 IGSF22Q8N9C0 903 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 SPRYD3Q8NCJ5 442 aa20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 DBR1Q9UK59 544 aaKnown RBP20.11■□□□□ 0.81
IGHV3-41-201ENST00000613121 STX6O43752 255 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 CDC25AP30304 524 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 TFDP1Q14186 410 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 MXD4Q14582 209 aaPredicted RBP20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 PADI6Q6TGC4 694 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 CATSPER4Q7RTX7 472 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 RNF149Q8NC42 400 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 TET1Q8NFU7 2136 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 PPM1EQ8WY54 764 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 DDX19AQ9NUU7 478 aaKnown RBP20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 DNM3Q9UQ16 869 aa20.1■□□□□ 0.81
IGHV3-41-201ENST00000613121 PP2D1A8MPX8 630 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 DGKIO75912 1065 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 BMP15O95972 392 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 ERVK-21P61565 698 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 FAM102BQ5T8I3 360 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 ARL6IP4Q66PJ3 421 aaKnown RBP20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 SRGAP1Q7Z6B7 1085 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 XPNPEP1Q9NQW7 623 aa20.09■□□□□ 0.81
IGHV3-41-201ENST00000613121 GTPBP6O43824 516 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 ARL2P36404 184 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 DSC3Q14574 896 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 ECM1Q16610 540 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 PAN2Q504Q3 1202 aaKnown RBP20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 SPRED2Q7Z698 418 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 RNF169Q8NCN4 708 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 MCPH1Q8NEM0 835 aa20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 MAFAQ8NHW3 353 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 SP7Q8TDD2 431 aaPredicted RBP20.08■□□□□ 0.81
IGHV3-41-201ENST00000613121 CDK5RAP3Q96JB5 506 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms