RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CYP4A11Q02928 519 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 DSC3Q14574 896 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 ZNF174Q15697 407 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 TMEM192Q8IY95 271 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 FBXO22Q8NEZ5 403 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 NEK9Q8TD19 979 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 SLC7A3Q8WY07 619 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 DHX33Q9H6R0 707 aaKnown RBP21.58■■□□□ 1.05
TCF3-219ENST00000610756 TTC3P53804 2025 aa21.58■■□□□ 1.05
TCF3-219ENST00000610756 WDR81Q562E7 1941 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 C9IYK1 514 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 ZBTB39O15060 712 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 RFC5P40937 340 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 NLRP7Q8WX94 980 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 CLP1Q92989 425 aaKnown RBP21.57■■□□□ 1.04
TCF3-219ENST00000610756 GCOM2Q9BZD3 368 aaPredicted RBP21.57■■□□□ 1.04
TCF3-219ENST00000610756 PCDHB7Q9Y5E2 793 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 ADGRA3Q8IWK6 1321 aa21.57■■□□□ 1.04
TCF3-219ENST00000610756 XRCC6P12956 609 aaKnown RBP eCLIP21.56■■□□□ 1.046e-6■■■■■ 27.6
TCF3-219ENST00000610756 BTG3Q14201 252 aaPredicted RBP21.56■■□□□ 1.04
TCF3-219ENST00000610756 TTC38Q5R3I4 469 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 ZNF410Q86VK4 478 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 GDPD5Q8WTR4 605 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 ZNF668Q96K58 619 aaPredicted RBP21.56■■□□□ 1.04
TCF3-219ENST00000610756 INO80BQ9C086 356 aaPredicted RBP21.56■■□□□ 1.04
TCF3-219ENST00000610756 ANKEF1Q9NU02 776 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 LRFN2Q9ULH4 789 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 NOL7Q9UMY1 257 aaKnown RBP21.56■■□□□ 1.04
TCF3-219ENST00000610756 RWDD3Q9Y3V2 267 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 COL4A6Q14031 1691 aa21.56■■□□□ 1.04
TCF3-219ENST00000610756 C5orf67F2Z3F1 127 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 H3BNC9 293 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 GAS2O43903 313 aaKnown RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 RB1P06400 928 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 LINC00271P0C7V0 271 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 ZSCAN20P17040 1043 aaPredicted RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 BMPR1AP36894 532 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 POLGP54098 1239 aaPredicted RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 XKR9Q5GH70 373 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 RHPN2Q8IUC4 686 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 CMTR2Q8IYT2 770 aaKnown RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 C4orf32Q8N8J7 132 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 SCLT1Q96NL6 688 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 ELAC1Q9H777 363 aaKnown RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 SPTBN5Q9NRC6 3674 aaKnown RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 A0A087WZ62 844 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 OR52Z1P0C646 297 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 GJB2P29033 226 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 TECP42680 631 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 TOB1P50616 345 aaPredicted RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 MICALL1Q8N3F8 863 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 PRPF31Q8WWY3 499 aaKnown RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 FDXACB1Q9BRP7 624 aaPredicted RBP21.55■■□□□ 1.04
TCF3-219ENST00000610756 CHST12Q9NRB3 414 aa21.55■■□□□ 1.04
TCF3-219ENST00000610756 POTEMA6NI47 508 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 ASAP2O43150 1006 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 SPATA31C1P0DKV0 1188 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 GPM6BQ13491 265 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 KSR1Q8IVT5 923 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 ATXN2LQ8WWM7 1075 aaKnown RBP21.54■■□□□ 1.04
TCF3-219ENST00000610756 TCP11Q8WWU5 503 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 POLR3CQ9BUI4 534 aaPredicted RBP21.54■■□□□ 1.04
TCF3-219ENST00000610756 TUFT1Q9NNX1 390 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 PRDM6Q9NQX0 595 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 TMEM161AQ9NX61 479 aa21.54■■□□□ 1.04
TCF3-219ENST00000610756 VCANP13611 3396 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 PRRC2BQ5JSZ5 2229 aaKnown RBP21.53■■□□□ 1.04
TCF3-219ENST00000610756 CSDE1O75534 798 aaKnown RBP21.53■■□□□ 1.04
TCF3-219ENST00000610756 CATSPER3Q86XQ3 398 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 PSPC1Q8WXF1 523 aaKnown RBP21.53■■□□□ 1.04
TCF3-219ENST00000610756 TMEM143Q96AN5 459 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 PLVAPQ9BX97 442 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 ATP6V0A4Q9HBG4 840 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 IFT122Q9HBG6 1241 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 SMC3Q9UQE7 1217 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 COL4A3BPQ9Y5P4 624 aa21.53■■□□□ 1.04
TCF3-219ENST00000610756 REV3LO60673 3130 aa21.52■■□□□ 1.04
TCF3-219ENST00000610756 XIRP2A4UGR9 3374 aa21.52■■□□□ 1.04
TCF3-219ENST00000610756 FGFR4P22455 802 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 SFPQP23246 707 aaKnown RBP eCLIP21.52■■□□□ 1.03
TCF3-219ENST00000610756 FXR2P51116 673 aaKnown RBP eCLIP21.52■■□□□ 1.038e-7■■□□□ 13.9
TCF3-219ENST00000610756 LAMTOR4Q0VGL1 99 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 PDIA5Q14554 519 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 EMC2Q15006 297 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 PTPROQ16827 1216 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 MRPL38Q96DV4 380 aaKnown RBP21.52■■□□□ 1.03
TCF3-219ENST00000610756 NLRP4Q96MN2 994 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 TRAIPQ9BWF2 469 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 DACT1Q9NYF0 836 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 PCDHB6Q9Y5E3 794 aa21.52■■□□□ 1.03
TCF3-219ENST00000610756 LOXHD1Q8IVV2 1947 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 A0A0U1RQF3 1178 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 H3BQV1 296 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 DGAT1O75907 488 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 RPA1P27694 616 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 CTNNB1P35222 781 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 RARRES1P49788 294 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 PTGDRQ13258 359 aa21.51■■□□□ 1.03
TCF3-219ENST00000610756 MXD4Q14582 209 aaPredicted RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms