RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 PHTF1Q9UMS5 762 aa6.43□□□□□ -1.38
LINC00397-202ENST00000606785 SLC5A6Q9Y289 635 aa6.43□□□□□ -1.38
LINC00397-202ENST00000606785 DAAM1Q9Y4D1 1078 aa6.43□□□□□ -1.38
LINC00397-202ENST00000606785 PRAMEF22A3QJZ6 481 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 FAM227AF5H4B4 570 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 H3BML4 177 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 PSPNO60542 156 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 TUSC2O75896 110 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 FOSP01100 380 aaPredicted RBP6.42□□□□□ -1.38
LINC00397-202ENST00000606785 PFKMP08237 780 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 DBHP09172 617 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 ARL4AP40617 200 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 FXR1P51114 621 aaKnown RBP eCLIP6.42□□□□□ -1.38
LINC00397-202ENST00000606785 LGALS4P56470 323 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 SLC6A3Q01959 620 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 ALDH6A1Q02252 535 aaKnown RBP6.42□□□□□ -1.38
LINC00397-202ENST00000606785 ROM1Q03395 351 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 ADCY2Q08462 1091 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 DBPQ10586 325 aaPredicted RBP6.42□□□□□ -1.38
LINC00397-202ENST00000606785 TRIM25Q14258 630 aaKnown RBP6.42□□□□□ -1.38
LINC00397-202ENST00000606785 PRAMEF18Q5VWM3 479 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 SLFN12LQ6IEE8 588 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 TOGARAM2Q6ZUX3 1019 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 KANSL1Q7Z3B3 1105 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 SPRED2Q7Z698 418 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 NLRX1Q86UT6 975 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 LYSMD2Q8IV50 215 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 CAMKK1Q8N5S9 505 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 TSPEARQ8WU66 669 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 RSAD2Q8WXG1 361 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 TMEM60Q9H2L4 133 aa6.42□□□□□ -1.38
LINC00397-202ENST00000606785 WNT11O96014 354 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 CYBBP04839 570 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 PNLIPP16233 465 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 FUT4P22083 530 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 SERPINB3P29508 390 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 SPIDRQ14159 915 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 PGS1Q32NB8 556 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 GRAMD1BQ3KR37 738 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 UNQ6494/PRO21346Q6UXR6 183 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 WFDC3Q8IUB2 231 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 DENND1CQ8IV53 801 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 SLC41A1Q8IVJ1 513 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 FAM156AQ8NDB6 213 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 PPP1R35Q8TAP8 253 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 TNIP3Q96KP6 325 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 NAA15Q9BXJ9 866 aaKnown RBP6.41□□□□□ -1.38
LINC00397-202ENST00000606785 ACE2Q9BYF1 805 aaPredicted RBP6.41□□□□□ -1.38
LINC00397-202ENST00000606785 RXFP1Q9HBX9 757 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 TNFRSF12AQ9NP84 129 aa6.41□□□□□ -1.38
LINC00397-202ENST00000606785 PUF60Q9UHX1 559 aaKnown RBP6.41□□□□□ -1.38
LINC00397-202ENST00000606785 ZBTB7AO95365 584 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 HPXP02790 462 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 AK2P54819 239 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 BCAR1P56945 870 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 FAM193AP78312 1265 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 CDK17Q00537 523 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 SNX17Q15036 470 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 LLGL1Q15334 1064 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 PAQR3Q6TCH7 311 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 CCDC149Q6ZUS6 474 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 LILRA2Q8N149 483 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 ENAHQ8N8S7 591 aaPredicted RBP6.4□□□□□ -1.38
LINC00397-202ENST00000606785 OR14C36Q8NHC7 312 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 PARD3BQ8TEW8 1205 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 NLRC4Q9NPP4 1024 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 UCKL1Q9NWZ5 548 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 ARHGAP28Q9P2N2 729 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 PRSS50Q9UI38 385 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 GPR160Q9UJ42 338 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 DENND2AQ9ULE3 1009 aa6.4□□□□□ -1.38
LINC00397-202ENST00000606785 MYPNQ86TC9 1320 aa6.4□□□□□ -1.39
LINC00397-202ENST00000606785 ZC3H12DA2A288 527 aaKnown RBP6.39□□□□□ -1.39
LINC00397-202ENST00000606785 B3GALT2O43825 422 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 MPIG6BO95866 241 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 PRNPP04156 253 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 MYL3P08590 195 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 SLC5A1P13866 664 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 PTGS1P23219 599 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 MC4RP32245 332 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 RGS3P49796 1198 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 SLC9A5Q14940 896 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 TIGD5Q53EQ6 642 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 CD276Q5ZPR3 534 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 SLC23A3Q6PIS1 610 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 ZNF574Q6ZN55 896 aaPredicted RBP6.39□□□□□ -1.39
LINC00397-202ENST00000606785 EVI5LQ96CN4 794 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 SHISA4Q96DD7 197 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 C19orf44Q9H6X5 657 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 PTPRHQ9HD43 1115 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 PLCB1Q9NQ66 1216 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 PRDM7Q9NQW5 492 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 DTLQ9NZJ0 730 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 HSPBP1Q9NZL4 362 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 LIMCH1Q9UPQ0 1083 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
LINC00397-202ENST00000606785 CCDC154A6NI56 674 aa6.38□□□□□ -1.39
LINC00397-202ENST00000606785 F8W031 263 aaPredicted RBP6.38□□□□□ -1.39
LINC00397-202ENST00000606785 NFIBO00712 420 aa6.38□□□□□ -1.39
LINC00397-202ENST00000606785 HTRA2O43464 458 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms