RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 TXKP42681 527 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
HCG18-242ENST00000602319 BMT2Q1RMZ1 405 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 SGSM1Q2NKQ1 1148 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 UBAP2Q5T6F2 1119 aaKnown RBP10.72□□□□□ -0.69
HCG18-242ENST00000602319 ENDOVQ8N8Q3 282 aaKnown RBP10.72□□□□□ -0.69
HCG18-242ENST00000602319 RFFLQ8WZ73 363 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 ART4Q93070 314 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 PARP2Q9UGN5 583 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 DAAM1Q9Y4D1 1078 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 KDM3AQ9Y4C1 1321 aa10.72□□□□□ -0.69
HCG18-242ENST00000602319 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 SLC16A3O15427 465 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 GGPS1O95749 300 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 FGGP02679 453 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 AFPP02771 609 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 ACTN1P12814 892 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 ATP2A2P16615 1042 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 SLC9A1P19634 815 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 VSTM1Q6UX27 236 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 REXO1Q8N1G1 1221 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 SNX29Q8TEQ0 813 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 CKAP2Q8WWK9 683 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 ARL2BPQ9Y2Y0 163 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 ASB3Q9Y575 518 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 KLRF2D3W0D1 207 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 TCEA3O75764 348 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 RARGP13631 454 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 SF3B3Q15393 1217 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 SPDYAQ5MJ70 313 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 INTS5Q6P9B9 1019 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 EXOC3L1Q86VI1 746 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 SPICE1Q8N0Z3 855 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 PIAS4Q8N2W9 510 aaPredicted RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 PRCCQ92733 491 aaPredicted RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 HAS1Q92839 578 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 UTP4Q969X6 686 aaKnown RBP10.71□□□□□ -0.69
HCG18-242ENST00000602319 BORCS6Q96GS4 357 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 SELENOSQ9BQE4 189 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 ETAA1Q9NY74 926 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 ZFATQ9P243 1243 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 PPP1R9AQ9ULJ8 1098 aa10.71□□□□□ -0.69
HCG18-242ENST00000602319 POTEMA6NI47 508 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 SPDYE3A6NKU9 549 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 A8MUI8 341 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 NPTXRO95502 500 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 FERP16591 822 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 HOXD13P35453 343 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 LBRQ14739 615 aaKnown RBP10.71□□□□□ -0.7
HCG18-242ENST00000602319 NFIL3Q16649 462 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 KRT79Q5XKE5 535 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 TAOK1Q7L7X3 1001 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 PNMA8AQ86V59 439 aaPredicted RBP10.71□□□□□ -0.7
HCG18-242ENST00000602319 C12orf50Q8NA57 414 aaPredicted RBP10.71□□□□□ -0.7
HCG18-242ENST00000602319 FBXO25Q8TCJ0 367 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 ZFAND2BQ8WV99 257 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 IFT74Q96LB3 600 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 TMEM237Q96Q45 408 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 MXD3Q9BW11 206 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 ANKIB1Q9P2G1 1089 aa10.71□□□□□ -0.7
HCG18-242ENST00000602319 IGSF9BQ9UPX0 1349 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 SUN1O94901 812 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 EYA4O95677 639 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 VIMP08670 466 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 USP17L8P0C7I0 530 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 PECAM1P16284 738 aaPredicted RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 IBSPP21815 317 aaPredicted RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 CHRNA3P32297 505 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 RPL21P46778 160 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 GALCP54803 685 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 MGAT5Q09328 741 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 CAVIN4Q5BKX8 364 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 C11orf63Q6NUN7 778 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 CYFIP1Q7L576 1253 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 DAAM2Q86T65 1068 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 SLCO2A1Q92959 643 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 CDK5RAP3Q96JB5 506 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 GPR88Q9GZN0 384 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 COL14A1Q05707 1796 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 ZNFX1Q9P2E3 1918 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 USP17L3A6NCW0 530 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 USP17L4A6NCW7 530 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 PODXLO00592 558 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 SNUPNO95149 360 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 TDP2O95551 362 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 RASA1P20936 1047 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 RAB27AP51159 221 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
HCG18-242ENST00000602319 USP17L1Q7RTZ2 530 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 CCDC65Q8IXS2 484 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 FITM2Q8N6M3 262 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 C7orf43Q8WVR3 580 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 SERPINB12Q96P63 405 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 LRMDAQ9H2I8 198 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 TMEM260Q9NX78 707 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 RASAL2Q9UJF2 1139 aa10.7□□□□□ -0.7
HCG18-242ENST00000602319 RPL26L1Q9UNX3 145 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms