RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 SMCHD1A6NHR9 2005 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 ANO9A1A5B4 782 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 POTEB2H3BUK9 544 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 PJA2O43164 708 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 GFPT2O94808 682 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 NOL4O94818 638 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 TUBBP07437 444 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 EDNRBP24530 442 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 NCKAP1LP55160 1127 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 POLR2FP61218 127 aaKnown RBP11.37□□□□□ -0.59
VPS25-203ENST00000589520 DMP1Q13316 513 aaPredicted RBP11.37□□□□□ -0.59
VPS25-203ENST00000589520 PRKG1Q13976 671 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 WHAMMP3Q1A5X7 153 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 CCDC122Q5T0U0 273 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 KLHDC7AQ5VTJ3 777 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 ABHD15Q6UXT9 468 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 GADL1Q6ZQY3 521 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 DAW1Q8N136 415 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 SMCR8Q8TEV9 937 aaPredicted RBP11.37□□□□□ -0.59
VPS25-203ENST00000589520 UBXN4Q92575 508 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 SLC35C1Q96A29 364 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 JAKMIP2Q96AA8 810 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 WDR24Q96S15 920 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 MROH8Q9H579 483 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 GABBR1Q9UBS5 961 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 PCDHA13Q9Y5I0 950 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 MRFAP1Q9Y605 127 aa11.37□□□□□ -0.59
VPS25-203ENST00000589520 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 KIAA0391O15091 583 aaKnown RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 CLIC2O15247 247 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 EXOC3O60645 756 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 TACC1O75410 805 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 SUPT20HL2P0C7V6 817 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 PON1P27169 355 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 ALDH5A1P51649 535 aaPredicted RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 KIF11P52732 1056 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 ACTR2P61160 394 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 TTLL12Q14166 644 aaPredicted RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 ASIC2Q16515 512 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 ASTE1Q2TB18 679 aaPredicted RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 ZC2HC1CQ53FD0 456 aaPredicted RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 TREML2Q5T2D2 321 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 FAM102BQ5T8I3 360 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 TCERG1LQ5VWI1 586 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 HAUS6Q7Z4H7 955 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 VPS36Q86VN1 386 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 SHCBP1Q8NEM2 672 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 TRIM58Q8NG06 486 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 CEP170P1Q96L14 293 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 IFT74Q96LB3 600 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 GANQ9H2C0 597 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 ELP3Q9H9T3 547 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 NRBP2Q9NSY0 501 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 ARGLU1Q9NWB6 273 aaPredicted RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 ARHGAP20Q9P2F6 1191 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 PNMA3Q9UL41 463 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 FZD1Q9UP38 647 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 SLC45A1Q9Y2W3 748 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 REXO2Q9Y3B8 237 aaKnown RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 RBBP6Q7Z6E9 1792 aaKnown RBP11.36□□□□□ -0.59
VPS25-203ENST00000589520 SBF1O95248 1867 aa11.36□□□□□ -0.59
VPS25-203ENST00000589520 RLFQ13129 1914 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 BACH1O14867 736 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 RGS20O76081 388 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 UCHL3P15374 230 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 PRLRP16471 622 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 FERP16591 822 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 EIF4A3P38919 411 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 PRKCIP41743 596 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 MAGEA1P43355 309 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 HERVK_113P62684 666 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 FKBP1BP68106 108 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 NCBP1Q09161 790 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 SNAPC2Q13487 334 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 LDLRAD1Q5T700 205 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 FAM160B1Q5W0V3 765 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 SWSAP1Q6NVH7 229 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 ANO5Q75V66 913 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 NCAPG2Q86XI2 1143 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 SLC35F6Q8N357 371 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 FAM133AQ8N9E0 248 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 XXYLT1Q8NBI6 393 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 UBE2Q2Q8WVN8 375 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 SECISBP2LQ93073 1101 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 RPGRIP1Q96KN7 1286 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 ALS2CR12Q96Q35 445 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 PURBQ96QR8 312 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 SPAG5Q96R06 1193 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 NIFKQ9BYG3 293 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 IFIH1Q9BYX4 1025 aaKnown RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
VPS25-203ENST00000589520 ATP6V0A4Q9HBG4 840 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 NMRK2Q9NPI5 230 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 ZNF302Q9NR11 478 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 PDLIM7Q9NR12 457 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
VPS25-203ENST00000589520 TSKSQ9UJT2 592 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms