RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 BRDTQ58F21 947 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 IQSEC1Q6DN90 963 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 CCSAPQ6IQ19 270 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ZNF574Q6ZN55 896 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ARMCX2Q7L311 632 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 FAM160B2Q86V87 743 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 PANK1Q8TE04 598 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 HERVK_113Q902F9 699 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 EZH1Q92800 747 aaPredicted RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 MKL1Q969V6 931 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ASB2Q96Q27 587 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 MPHOSPH6Q99547 160 aaKnown RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 MKNK1Q9BUB5 465 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 NACAP1Q9BZK3 213 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 LRRCC1Q9C099 1032 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 UPF3AQ9H1J1 476 aaKnown RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 PRDM12Q9H4Q4 367 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 ACAD9Q9H845 621 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 SLC38A10Q9HBR0 1119 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 RAVER2Q9HCJ3 691 aaKnown RBP6.58□□□□□ -1.36
DNMT1-220ENST00000589351 TBX21Q9UL17 535 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 RIPK3Q9Y572 518 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 SLC4A7Q9Y6M7 1214 aa6.58□□□□□ -1.36
DNMT1-220ENST00000589351 CUL9Q8IWT3 2517 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 COL11A1P12107 1806 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 LAMA2P24043 3122 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 KIF28PB7ZC32 967 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 DYNC1LI2O43237 492 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 NDUFB10O96000 172 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 PFKMP08237 780 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 ACTN1P12814 892 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 STAT2P52630 851 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 NKX3-2P78367 333 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 ITGA7Q13683 1181 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 IKBKEQ14164 716 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 CCDC85BQ15834 202 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 PDE12Q6L8Q7 609 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 C16orf59Q7L2K0 433 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 VN1R5Q7Z5H4 357 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 WFDC3Q8IUB2 231 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 FAM126BQ8IXS8 530 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 CCDC144CPQ8IYA2 1237 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 STK11IPQ8N1F8 1099 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 C1orf127Q8N9H9 656 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 BCL7CQ8WUZ0 217 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 STRBPQ96SI9 672 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 NUP88Q99567 741 aaPredicted RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 PUS7LQ9H0K6 701 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 HIPK3Q9H422 1215 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 ADD3Q9UEY8 706 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 NOVA2Q9UNW9 492 aaKnown RBP6.57□□□□□ -1.36
DNMT1-220ENST00000589351 Q9Y3F1 56 aa6.57□□□□□ -1.36
DNMT1-220ENST00000589351 BAZ2AQ9UIF9 1905 aaKnown RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 GSG1L2A8MUP6 293 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 B4DLN1 442 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 TMEM232C9JQI7 657 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 BIN1O00499 593 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 RNF113AO15541 343 aaKnown RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 CD4P01730 458 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 CYP2C18P33260 490 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SLC1A4P43007 532 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 MRPL12P52815 198 aaKnown RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SOX4Q06945 474 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 PLCL1Q15111 1095 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 FSCN1Q16658 493 aaKnown RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SWI5Q1ZZU3 235 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 NAALADL2Q58DX5 795 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 RASIP1Q5U651 963 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SLFN13Q68D06 897 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 ZNF765Q7L2R6 523 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 OTOP2Q7RTS6 562 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 ZNF438Q7Z4V0 828 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SPRED2Q7Z698 418 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 KBTBD3Q8NAB2 608 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 USP38Q8NB14 1042 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SLC43A3Q8NBI5 491 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 GMCL1P1Q8NEA9 526 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 STAG1Q8WVM7 1258 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 APPBP2Q92624 585 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 UHRF1Q96T88 793 aaPredicted RBP6.56□□□□□ -1.36
DNMT1-220ENST00000589351 C1QTNF1Q9BXJ1 281 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 NKX2-4Q9H2Z4 354 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 HOMER2Q9NSB8 354 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 ECHDC1Q9NTX5 307 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 ZBTB40Q9NUA8 1239 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 MTMR4Q9NYA4 1195 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 STIM2Q9P246 746 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 PNMA2Q9UL42 364 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 SLC5A6Q9Y289 635 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 PCDHA11Q9Y5I1 949 aa6.56□□□□□ -1.36
DNMT1-220ENST00000589351 PARP14Q460N5 1801 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 RAD50Q92878 1312 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 MYADML2A6NDP7 307 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 KPNA6O60684 536 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 PLA2G6O60733 806 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 ALAS1P13196 640 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CES1P23141 567 aa6.55□□□□□ -1.36
DNMT1-220ENST00000589351 CPT1AP50416 773 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms