RNA–Protein interactions for RNA: ENST00000588749.1

CACTIN-206, Transcript of cactin, spliceosome C complex subunit, humanhuman

TSL 3

Gene CACTIN, Length 391 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-206ENST00000588749 SUCLA2Q9P2R7 463 aaPredicted RBP16.21■□□□□ 0.19
CACTIN-206ENST00000588749 SMC3Q9UQE7 1217 aa16.21■□□□□ 0.19
CACTIN-206ENST00000588749 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.19
CACTIN-206ENST00000588749 ZBTB39O15060 712 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 DARSP14868 501 aaKnown RBP16.2■□□□□ 0.18
CACTIN-206ENST00000588749 XKR9Q5GH70 373 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 OTUD6AQ7L8S5 288 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 RHPN2Q8IUC4 686 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 FIBCD1Q8N539 461 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 FBXO22Q8NEZ5 403 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 RC3H2Q9HBD1 1191 aaKnown RBP16.2■□□□□ 0.18
CACTIN-206ENST00000588749 PPME1Q9Y570 386 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.2■□□□□ 0.18
CACTIN-206ENST00000588749 MTCH2Q9Y6C9 303 aa16.2■□□□□ 0.18
CACTIN-206ENST00000588749 RALGAPA2Q2PPJ7 1873 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 A0A087WZ62 844 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 H3BQV1 296 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 LPXNO60711 386 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 DGKIO75912 1065 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 STAG3L1P0CL83 205 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 FGFR4P22455 802 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 RFC5P40937 340 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 TECP42680 631 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 SARSP49591 514 aaKnown RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 BTG3Q14201 252 aaPredicted RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 FAM43BQ6ZT52 329 aaPredicted RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 KSR1Q8IVT5 923 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 NLRP4Q96MN2 994 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 FDXACB1Q9BRP7 624 aaPredicted RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 GCOM2Q9BZD3 368 aaPredicted RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
CACTIN-206ENST00000588749 RGS18Q9NS28 235 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 C1orf112Q9NSG2 853 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
CACTIN-206ENST00000588749 BRWD1Q9NSI6 2320 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 CSDE1O75534 798 aaKnown RBP16.18■□□□□ 0.18
CACTIN-206ENST00000588749 LYPLA2O95372 231 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 POU3F3P20264 500 aaPredicted RBP16.18■□□□□ 0.18
CACTIN-206ENST00000588749 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
CACTIN-206ENST00000588749 CDC42EP1Q00587 391 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 EMC2Q15006 297 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 SLC24A5Q71RS6 500 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 ZNF410Q86VK4 478 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 CRIPAKQ8N1N5 446 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 ZNF689Q96CS4 500 aaPredicted RBP16.18■□□□□ 0.18
CACTIN-206ENST00000588749 CCDC43Q96MW1 224 aaKnown RBP16.18■□□□□ 0.18
CACTIN-206ENST00000588749 SAMD11Q96NU1 681 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 PCDHB6Q9Y5E3 794 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
CACTIN-206ENST00000588749 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 C9IYK1 514 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 CTNNB1P35222 781 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 GATMP50440 423 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 DSC3Q14574 896 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 PAN2Q504Q3 1202 aaKnown RBP16.17■□□□□ 0.18
CACTIN-206ENST00000588749 TMEM192Q8IY95 271 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 CMTR2Q8IYT2 770 aaKnown RBP16.17■□□□□ 0.18
CACTIN-206ENST00000588749 ERMNQ8TAM6 284 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 PIGOQ8TEQ8 1089 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 PSPC1Q8WXF1 523 aaKnown RBP16.17■□□□□ 0.18
CACTIN-206ENST00000588749 MTRQ99707 1265 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 PRDM6Q9NQX0 595 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 ANKEF1Q9NU02 776 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 PCDHB7Q9Y5E2 793 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
CACTIN-206ENST00000588749 A0A0C4DFX4 3053 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 A0A087WWV3 80 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 GAS2O43903 313 aaKnown RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 MED24O75448 989 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 SPATA31C1P0DKV0 1188 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 SFPQP23246 707 aaKnown RBP eCLIP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 PTGDRQ13258 359 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 CATSPER3Q86XQ3 398 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 C4orf32Q8N8J7 132 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 TCP11Q8WWU5 503 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 PRPF31Q8WWY3 499 aaKnown RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 TUFT1Q9NNX1 390 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 MRPL42Q9Y6G3 142 aaKnown RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 KIAA1671Q9BY89 1806 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 FNDC1Q4ZHG4 1894 aaPredicted RBP16.16■□□□□ 0.18
CACTIN-206ENST00000588749 TTC28Q96AY4 2481 aa16.16■□□□□ 0.18
CACTIN-206ENST00000588749 LINC00271P0C7V0 271 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 RARRES1P49788 294 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 LAMTOR4Q0VGL1 99 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 GPM6BQ13491 265 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 CUL4AQ13619 759 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 SKIV2LQ15477 1246 aaKnown RBP16.15■□□□□ 0.18
CACTIN-206ENST00000588749 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
CACTIN-206ENST00000588749 POTEGQ6S5H5 508 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 CLP1Q92989 425 aaKnown RBP16.15■□□□□ 0.18
CACTIN-206ENST00000588749 POLR3CQ9BUI4 534 aaPredicted RBP16.15■□□□□ 0.18
CACTIN-206ENST00000588749 INO80BQ9C086 356 aaPredicted RBP16.15■□□□□ 0.18
CACTIN-206ENST00000588749 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
CACTIN-206ENST00000588749 XPNPEP1Q9NQW7 623 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms