RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 KCNJ6P48051 423 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 SMAD3P84022 425 aaKnown RBP20.26■□□□□ 0.83
LIMD2-211ENST00000583211 GRIN1Q05586 938 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 PAK2Q13177 524 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 TCTN1Q2MV58 587 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 CABP7Q86V35 215 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 RHPN2Q8IUC4 686 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 KRI1Q8N9T8 703 aaKnown RBP20.26■□□□□ 0.83
LIMD2-211ENST00000583211 MCPH1Q8NEM0 835 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 TMEM40Q8WWA1 233 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 CDK5RAP3Q96JB5 506 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 PPP1R16BQ96T49 567 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 FTHL17Q9BXU8 183 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 CCSER1Q9C0I3 900 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 BHMT2Q9H2M3 363 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 AGO3Q9H9G7 860 aaKnown RBP20.26■□□□□ 0.83
LIMD2-211ENST00000583211 CDHR5Q9HBB8 845 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 PADI3Q9ULW8 664 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 ATP6V1DQ9Y5K8 247 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 COL4A3BPQ9Y5P4 624 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 TTC3P53804 2025 aa20.26■□□□□ 0.83
LIMD2-211ENST00000583211 SPTLC2O15270 562 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 EIF4BP23588 611 aaKnown RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 CD52P31358 61 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 WDR5P61964 334 aaKnown RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 MXD4Q14582 209 aaPredicted RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 PADI6Q6TGC4 694 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 PRPF31Q8WWY3 499 aaKnown RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 NLRP7Q8WX94 980 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 TMEM143Q96AN5 459 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 CALML4Q96GE6 196 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 SCLT1Q96NL6 688 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 PNMA5Q96PV4 448 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 CSRNP2Q9H175 543 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 BMP2KQ9NSY1 1161 aaPredicted RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 TFIP11Q9UBB9 837 aaKnown RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 NOC2LQ9Y3T9 749 aaKnown RBP20.25■□□□□ 0.83
LIMD2-211ENST00000583211 LAMA3Q16787 3333 aa20.25■□□□□ 0.83
LIMD2-211ENST00000583211 E9PMD0 336 aa20.24■□□□□ 0.83
LIMD2-211ENST00000583211 GPR182O15218 404 aa20.24■□□□□ 0.83
LIMD2-211ENST00000583211 USO1O60763 962 aaKnown RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 DARSP14868 501 aaKnown RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 ATP2A2P16615 1042 aaKnown RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 GRB10Q13322 594 aa20.24■□□□□ 0.83
LIMD2-211ENST00000583211 ZRSR1Q15695 479 aaKnown RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 TMEM119Q4V9L6 283 aa20.24■□□□□ 0.83
LIMD2-211ENST00000583211 GCOM2Q9BZD3 368 aaPredicted RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 INO80BQ9C086 356 aaPredicted RBP20.24■□□□□ 0.83
LIMD2-211ENST00000583211 CYP11B2P19099 503 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 DDIT3P35638 169 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 ARL2P36404 184 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 TXLNAP40222 546 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 NUCB2P80303 420 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 POU5F1BQ06416 359 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 LAMTOR4Q0VGL1 99 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 KCNG4Q8TDN1 519 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 NLRP4Q96MN2 994 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 ERVK-5Q9HDB9 667 aa20.23■□□□□ 0.83
LIMD2-211ENST00000583211 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
LIMD2-211ENST00000583211 A0A087WZ62 844 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 SOX1O00570 391 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 AMHP03971 560 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 FXR1P51114 621 aaKnown RBP eCLIP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 DNM1Q05193 864 aaKnown RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 NFX1Q12986 1120 aaKnown RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 TFDP1Q14186 410 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 FOXD4L6Q3SYB3 417 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 GPR153Q6NV75 609 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 FOXD4L3Q6VB84 417 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 KCNK18Q7Z418 384 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 KSR1Q8IVT5 923 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 RASSF8Q8NHQ8 419 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 CLIC6Q96NY7 704 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 FDXACB1Q9BRP7 624 aaPredicted RBP20.22■□□□□ 0.83
LIMD2-211ENST00000583211 IFT122Q9HBG6 1241 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 KCND2Q9NZV8 630 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 ST3GAL5Q9UNP4 418 aa20.22■□□□□ 0.83
LIMD2-211ENST00000583211 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 SFPQP23246 707 aaKnown RBP eCLIP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 KRT85P78386 507 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 FAM109BQ6ICB4 259 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 SRGAP1Q7Z6B7 1085 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 HERC6Q8IVU3 1022 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 EPSTI1Q96J88 318 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 ZNF668Q96K58 619 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 NFKBIZQ9BYH8 718 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 POLR3FQ9H1D9 316 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 TSPYL2Q9H2G4 693 aaPredicted RBP20.21■□□□□ 0.83
LIMD2-211ENST00000583211 TMX1Q9H3N1 280 aa20.21■□□□□ 0.83
LIMD2-211ENST00000583211 CUTAO60888 179 aa20.2■□□□□ 0.82
LIMD2-211ENST00000583211 SRGAP2CP0DJJ0 459 aa20.2■□□□□ 0.82
LIMD2-211ENST00000583211 GLRA2P23416 452 aa20.2■□□□□ 0.82
LIMD2-211ENST00000583211 PHKA2P46019 1235 aa20.2■□□□□ 0.82
LIMD2-211ENST00000583211 DEFB103AP81534 67 aa20.2■□□□□ 0.82
LIMD2-211ENST00000583211 KARSQ15046 597 aaKnown RBP20.2■□□□□ 0.82
LIMD2-211ENST00000583211 PCBP1Q15365 356 aaKnown RBP eCLIP20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms