RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 LARP1BQ659C4 914 aaKnown RBP29.49■■■□□ 2.31
PPP4R1-204ENST00000577393 CRIPAKQ8N1N5 446 aa29.49■■■□□ 2.31
PPP4R1-204ENST00000577393 DENND3A2RUS2 1198 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 SPATA31C1P0DKV0 1188 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 RHPN2Q8IUC4 686 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 NPAS4Q8IUM7 802 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 C17orf80Q9BSJ5 609 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 RGS18Q9NS28 235 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 BMP2KQ9NSY1 1161 aaPredicted RBP29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 ANKEF1Q9NU02 776 aa29.48■■■□□ 2.31
PPP4R1-204ENST00000577393 A0A087WZ62 844 aa29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 PTGDRQ13258 359 aa29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 KSR1Q8IVT5 923 aa29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 TMEM143Q96AN5 459 aa29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 FDXACB1Q9BRP7 624 aaPredicted RBP29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 GCOM2Q9BZD3 368 aaPredicted RBP29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 RC3H2Q9HBD1 1191 aaKnown RBP29.47■■■□□ 2.31
PPP4R1-204ENST00000577393 A0A087WWV3 80 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 MED24O75448 989 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 CSDE1O75534 798 aaKnown RBP29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 DGKIO75912 1065 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 STAG3L1P0CL83 205 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 FGFR4P22455 802 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 SARSP49591 514 aaKnown RBP29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 GRB10Q13322 594 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 DSC3Q14574 896 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 EMC2Q15006 297 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 ZNF410Q86VK4 478 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 CATSPER3Q86XQ3 398 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 PIGOQ8TEQ8 1089 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 ZNF689Q96CS4 500 aaPredicted RBP29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 TUFT1Q9NNX1 390 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 C1orf112Q9NSG2 853 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 PRUNE2Q8WUY3 3088 aa29.46■■■□□ 2.31
PPP4R1-204ENST00000577393 C9IYK1 514 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 IBSPP21815 317 aaPredicted RBP29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 RILPL1Q5EBL4 403 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 SLC24A5Q71RS6 500 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 FIBCD1Q8N539 461 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 SLC17A8Q8NDX2 589 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 ERMNQ8TAM6 284 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 PPM1EQ8WY54 764 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 NLRP4Q96MN2 994 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 POLR3CQ9BUI4 534 aaPredicted RBP29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 LRFN2Q9ULH4 789 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 COL4A3BPQ9Y5P4 624 aa29.45■■■□□ 2.31
PPP4R1-204ENST00000577393 TRANK1O15050 2925 aa29.45■■■□□ 2.3
PPP4R1-204ENST00000577393 ADGRA3Q8IWK6 1321 aa29.45■■■□□ 2.3
PPP4R1-204ENST00000577393 COL4A6Q14031 1691 aa29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 GAS2O43903 313 aaKnown RBP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 LPXNO60711 386 aa29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 XRCC6P12956 609 aaKnown RBP eCLIP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 POU3F3P20264 500 aaPredicted RBP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 FXR2P51116 673 aaKnown RBP eCLIP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 GDPD5Q8WTR4 605 aa29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 PRPF31Q8WWY3 499 aaKnown RBP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 PSPC1Q8WXF1 523 aaKnown RBP29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 MTRQ99707 1265 aa29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 MTCH2Q9Y6C9 303 aa29.44■■■□□ 2.3
PPP4R1-204ENST00000577393 GTPBP6O43824 516 aaPredicted RBP29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 RPA1P27694 616 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 RARRES1P49788 294 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 FBXO22Q8NEZ5 403 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 TCP11Q8WWU5 503 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 CCDC43Q96MW1 224 aaKnown RBP29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 SAMD11Q96NU1 681 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 XPNPEP1Q9NQW7 623 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 PCDHB7Q9Y5E2 793 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 ARID2Q68CP9 1835 aa29.43■■■□□ 2.3
PPP4R1-204ENST00000577393 LAD1O00515 517 aa29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 ZSCAN20P17040 1043 aaPredicted RBP29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 FAM189BP81408 668 aa29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 BTG3Q14201 252 aaPredicted RBP29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 CCDC85BQ15834 202 aaPredicted RBP29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 EPC2Q52LR7 807 aa29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 TMEM192Q8IY95 271 aa29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 INO80BQ9C086 356 aaPredicted RBP29.42■■■□□ 2.3
PPP4R1-204ENST00000577393 DGAT1O75907 488 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 LAMTOR4Q0VGL1 99 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 PDIA5Q14554 519 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 MICALL1Q8N3F8 863 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 NACC1Q96RE7 527 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 ATP6V0A4Q9HBG4 840 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 IFT122Q9HBG6 1241 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 RNF216Q9NWF9 866 aaPredicted RBP29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 LRWD1Q9UFC0 647 aa29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 PRRC2BQ5JSZ5 2229 aaKnown RBP29.41■■■□□ 2.3
PPP4R1-204ENST00000577393 K7ELQ4 463 aaPredicted RBP29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 LINC00271P0C7V0 271 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 SRGAP2CP0DJJ0 459 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 PRPHP41219 470 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 GATMP50440 423 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 IL17AQ16552 155 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 HAUS3Q68CZ6 603 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 POTEGQ6S5H5 508 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 FERMT3Q86UX7 667 aa29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 CMTR2Q8IYT2 770 aaKnown RBP29.4■■■□□ 2.3
PPP4R1-204ENST00000577393 ASAP2O43150 1006 aa29.39■■■□□ 2.3
PPP4R1-204ENST00000577393 SFPQP23246 707 aaKnown RBP eCLIP29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms