RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 IGBP1P78318 339 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 DHX8Q14562 1220 aaKnown RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 ARSHQ5FYA8 562 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 RINT1Q6NUQ1 792 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 PADI6Q6TGC4 694 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 C1orf186Q6ZWK4 172 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 LMBR1Q8WVP7 490 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 TRIM44Q96DX7 344 aaPredicted RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 ABHD8Q96I13 439 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 RUSC1Q9BVN2 902 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 SENP6Q9GZR1 1112 aaPredicted RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 DHX33Q9H6R0 707 aaKnown RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 PDLIM7Q9NR12 457 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 TRIP12Q14669 1992 aaPredicted RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 A0A0U1RQG5 324 aaPredicted RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 SSBP05455 408 aaKnown RBP eCLIP18.31■□□□□ 0.52
TPM1-219ENST00000559397 ZNF18P17022 549 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 ASIC1P78348 528 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 PTPN11Q06124 597 aaPredicted RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 UNC13DQ70J99 1090 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 CCDC47Q96A33 483 aaKnown RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 CCDC43Q96MW1 224 aaKnown RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 FANCLQ9NW38 375 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 GDAQ9Y2T3 454 aa18.31■□□□□ 0.52
TPM1-219ENST00000559397 MKI67P46013 3256 aaKnown RBP18.31■□□□□ 0.52
TPM1-219ENST00000559397 IGKV6-21A0A0C4DH24 114 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 C17orf102A2RUQ5 167 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 MAFO75444 373 aaPredicted RBP18.3■□□□□ 0.52
TPM1-219ENST00000559397 DGAT1O75907 488 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 C22orf31O95567 290 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 CDK7P50613 346 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 COBLL1Q53SF7 1204 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 SPATA1Q5VX52 437 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 GDF6Q6KF10 455 aaPredicted RBP18.3■□□□□ 0.52
TPM1-219ENST00000559397 MTHFD1LQ6UB35 978 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 ADSSL1Q8N142 457 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 ZBTB10Q96DT7 871 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 PAWRQ96IZ0 340 aaKnown RBP18.3■□□□□ 0.52
TPM1-219ENST00000559397 NFE2L3Q9Y4A8 694 aa18.3■□□□□ 0.52
TPM1-219ENST00000559397 MBLAC1A4D2B0 266 aaPredicted RBP18.29■□□□□ 0.52
TPM1-219ENST00000559397 ARVCFO00192 962 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 USO1O60763 962 aaKnown RBP18.29■□□□□ 0.52
TPM1-219ENST00000559397 KLRC1P26715 233 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 RFC5P40937 340 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 PRCPP42785 496 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 ZNF200P98182 395 aaPredicted RBP18.29■□□□□ 0.52
TPM1-219ENST00000559397 TBC1D8BQ0IIM8 1120 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 FAM47CQ5HY64 1035 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 GPBP1Q86WP2 473 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 DDX12PQ92771 950 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 DNAJC19Q96DA6 116 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 SEZ6LQ9BYH1 1024 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 C11orf49Q9H6J7 331 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 XPNPEP1Q9NQW7 623 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 EXOC1Q9NV70 894 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 KCND2Q9NZV8 630 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 RWDD2AQ9UIY3 292 aa18.29■□□□□ 0.52
TPM1-219ENST00000559397 EVPLQ92817 2033 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 NPHP3-ACAD11A0A0J9YXS1 232 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 MAGEB2O15479 319 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 TREHO43280 583 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 GNAT1P11488 350 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 ATP1A3P13637 1013 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 POLGP54098 1239 aaPredicted RBP18.28■□□□□ 0.52
TPM1-219ENST00000559397 EHHADHQ08426 723 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 SLC39A5Q6ZMH5 540 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 LINC01465Q8N7H1 131 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 CTAGE1Q96RT6 745 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 BMP2KQ9NSY1 1161 aaPredicted RBP18.28■□□□□ 0.52
TPM1-219ENST00000559397 GUCY2CP25092 1073 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 FANCCQ00597 558 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 PAK1Q13153 545 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 MKRN4PQ13434 485 aaPredicted RBP18.28■□□□□ 0.52
TPM1-219ENST00000559397 EMC2Q15006 297 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 SNX17Q15036 470 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 C1orf53Q5VUE5 145 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 KLHL10Q6JEL2 608 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 NECAB2Q7Z6G3 386 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 SLC7A3Q8WY07 619 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 ATP6V0A4Q9HBG4 840 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 PCDHA2Q9Y5H9 948 aa18.28■□□□□ 0.52
TPM1-219ENST00000559397 PPP1R2P41236 205 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 SOX10P56693 466 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 DRP2Q13474 957 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 GIT2Q14161 759 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 EXOC8Q8IYI6 725 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 MCPH1Q8NEM0 835 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 JPH2Q9BR39 696 aaPredicted RBP18.27■□□□□ 0.52
TPM1-219ENST00000559397 CTNND2Q9UQB3 1225 aa18.27■□□□□ 0.52
TPM1-219ENST00000559397 ATN1P54259 1190 aaPredicted RBP18.26■□□□□ 0.51
TPM1-219ENST00000559397 STK4Q13043 487 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 PSMD2Q13200 908 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 CDKAL1Q5VV42 579 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 EFCAB12Q6NXP0 572 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 MAEAQ7L5Y9 396 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 DYMQ7RTS9 669 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 DAW1Q8N136 415 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
TPM1-219ENST00000559397 NELFBQ8WX92 580 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms