RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 FAM102BQ5T8I3 360 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 TMEM143Q96AN5 459 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 ZNF689Q96CS4 500 aaPredicted RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 EIF2AK1Q9BQI3 630 aaKnown RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 FDXACB1Q9BRP7 624 aaPredicted RBP23.11■■□□□ 1.29
HIF1A-206ENST00000553999 PCDHA12Q9UN75 941 aa23.11■■□□□ 1.29
HIF1A-206ENST00000553999 TTC3P53804 2025 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 ST18O60284 1047 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 DARSP14868 501 aaKnown RBP23.1■■□□□ 1.29
HIF1A-206ENST00000553999 POU3F3P20264 500 aaPredicted RBP23.1■■□□□ 1.29
HIF1A-206ENST00000553999 YWHABP31946 246 aaKnown RBP23.1■■□□□ 1.29
HIF1A-206ENST00000553999 XKR9Q5GH70 373 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 ODR4Q5SWX8 454 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 SPOUT1Q5T280 376 aaKnown RBP23.1■■□□□ 1.29
HIF1A-206ENST00000553999 EP400NLQ6ZTU2 488 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 SAMD11Q96NU1 681 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 RGS18Q9NS28 235 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 UNC80Q8N2C7 3258 aa23.1■■□□□ 1.29
HIF1A-206ENST00000553999 H3BNC9 293 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 MAFO75444 373 aaPredicted RBP23.09■■□□□ 1.29
HIF1A-206ENST00000553999 LINC00271P0C7V0 271 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 EIF4BP23588 611 aaKnown RBP23.09■■□□□ 1.29
HIF1A-206ENST00000553999 DNM2P50570 870 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 LONRF3Q496Y0 759 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 TJAP1Q5JTD0 557 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 IL27Q8NEV9 243 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 ASB2Q96Q27 587 aa23.09■■□□□ 1.29
HIF1A-206ENST00000553999 ALG13Q9NP73 1137 aaKnown RBP23.09■■□□□ 1.29
HIF1A-206ENST00000553999 C9IYK1 514 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 GRM6O15303 877 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 BMPR1AP36894 532 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 MRPS5P82675 430 aaKnown RBP23.08■■□□□ 1.29
HIF1A-206ENST00000553999 DSC3Q14574 896 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 SLC24A5Q71RS6 500 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 CMTR2Q8IYT2 770 aaKnown RBP23.08■■□□□ 1.29
HIF1A-206ENST00000553999 FBXO18Q8NFZ0 1043 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 SLC7A3Q8WY07 619 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 GCOM2Q9BZD3 368 aaPredicted RBP23.08■■□□□ 1.29
HIF1A-206ENST00000553999 ZSWIM4Q9H7M6 989 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 C1orf112Q9NSG2 853 aa23.08■■□□□ 1.29
HIF1A-206ENST00000553999 IGKV6-21A0A0C4DH24 114 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 DKC1O60832 514 aaKnown RBP eCLIP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 SRGAP2CP0DJJ0 459 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 ZSCAN20P17040 1043 aaPredicted RBP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 EMC2Q15006 297 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 PTPROQ16827 1216 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 TTC38Q5R3I4 469 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 CRIPAKQ8N1N5 446 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 ATXN2LQ8WWM7 1075 aaKnown RBP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 MRPL38Q96DV4 380 aaKnown RBP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 TMX3Q96JJ7 454 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 CCDC43Q96MW1 224 aaKnown RBP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 NECAB3Q96P71 396 aaPredicted RBP23.07■■□□□ 1.28
HIF1A-206ENST00000553999 ATP6V0A4Q9HBG4 840 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 KIAA1671Q9BY89 1806 aa23.07■■□□□ 1.28
HIF1A-206ENST00000553999 SLITRK3O94933 977 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 TECP42680 631 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 TCEAL5Q5H9L2 206 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 MCTP1Q6DN14 999 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 C4orf19Q8IY42 314 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 PIGOQ8TEQ8 1089 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 MTMR9Q96QG7 549 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 C11orf84Q9BUA3 381 aaPredicted RBP23.06■■□□□ 1.28
HIF1A-206ENST00000553999 FOXP1Q9H334 677 aaPredicted RBP23.06■■□□□ 1.28
HIF1A-206ENST00000553999 PIN4Q9Y237 131 aaKnown RBP23.06■■□□□ 1.28
HIF1A-206ENST00000553999 COL4A3BPQ9Y5P4 624 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 RALGAPA2Q2PPJ7 1873 aa23.06■■□□□ 1.28
HIF1A-206ENST00000553999 OR52Z1P0C646 297 aa23.05■■□□□ 1.28
HIF1A-206ENST00000553999 NOSTRINQ8IVI9 506 aa23.05■■□□□ 1.28
HIF1A-206ENST00000553999 ADAMTS19Q8TE59 1207 aa23.05■■□□□ 1.28
HIF1A-206ENST00000553999 HLA-CQ95604 372 aa23.05■■□□□ 1.28
HIF1A-206ENST00000553999 TBC1D32Q96NH3 1257 aa23.05■■□□□ 1.28
HIF1A-206ENST00000553999 MAEAQ7L5Y9 396 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 OTUD6AQ7L8S5 288 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 CATSPER4Q7RTX7 472 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 ECHDC2Q86YB7 292 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 KLHL23Q8NBE8 558 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 PRPF31Q8WWY3 499 aaKnown RBP23.04■■□□□ 1.28
HIF1A-206ENST00000553999 CLP1Q92989 425 aaKnown RBP23.04■■□□□ 1.28
HIF1A-206ENST00000553999 TMEM161AQ9NX61 479 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 LMCD1Q9NZU5 365 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 PCDHGC5Q9Y5F6 944 aa23.04■■□□□ 1.28
HIF1A-206ENST00000553999 ARID2Q68CP9 1835 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 USO1O60763 962 aaKnown RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 SFPQP23246 707 aaKnown RBP eCLIP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 PBX3P40426 434 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 RFC5P40937 340 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 TIGD5Q53EQ6 642 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 TWF2Q6IBS0 349 aaKnown RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 PSPC1Q8WXF1 523 aaKnown RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 LPPQ93052 612 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 MTRQ99707 1265 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 JPH2Q9BR39 696 aaPredicted RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 DHX33Q9H6R0 707 aaKnown RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 NOL7Q9UMY1 257 aaKnown RBP23.03■■□□□ 1.28
HIF1A-206ENST00000553999 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
HIF1A-206ENST00000553999 C5orf67F2Z3F1 127 aa23.02■■□□□ 1.28
HIF1A-206ENST00000553999 MED24O75448 989 aa23.02■■□□□ 1.28
HIF1A-206ENST00000553999 ITGB1P05556 798 aa23.02■■□□□ 1.28
HIF1A-206ENST00000553999 KCNA5P22460 613 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms