RNA–Protein interactions for RNA: ENST00000553331.5

PNN-202, Transcript of pinin, desmosome associated protein, humanhuman

TSL 3 BASIC

Gene PNN, Length 656 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNN-202ENST00000553331 NSUN3Q9H649 340 aaKnown RBP20.11■□□□□ 0.81
PNN-202ENST00000553331 LIMCH1Q9UPQ0 1083 aa20.11■□□□□ 0.81
PNN-202ENST00000553331 ATG2AQ2TAZ0 1938 aa20.11■□□□□ 0.81
PNN-202ENST00000553331 FNDC1Q4ZHG4 1894 aaPredicted RBP20.11■□□□□ 0.81
PNN-202ENST00000553331 C9IYK1 514 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 TBX3O15119 743 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 FGFR1P11362 822 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 ATP2B1P20020 1258 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 RBM25P49756 843 aaKnown RBP20.1■□□□□ 0.81
PNN-202ENST00000553331 ANO5Q75V66 913 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 RHPN2Q8IUC4 686 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 RNF169Q8NCN4 708 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 TNFRSF25Q93038 417 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 ATP6V0A4Q9HBG4 840 aa20.1■□□□□ 0.81
PNN-202ENST00000553331 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
PNN-202ENST00000553331 SUCLA2Q9P2R7 463 aaPredicted RBP20.1■□□□□ 0.81
PNN-202ENST00000553331 VCANP13611 3396 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 P4HBP07237 508 aaKnown RBP20.09■□□□□ 0.81
PNN-202ENST00000553331 DARSP14868 501 aaKnown RBP20.09■□□□□ 0.81
PNN-202ENST00000553331 NPEPPSP55786 919 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 CTTNQ14247 550 aaKnown RBP20.09■□□□□ 0.81
PNN-202ENST00000553331 DSC3Q14574 896 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 SLFN12Q8IYM2 578 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 KLHL23Q8NBE8 558 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 DYDC2Q96IM9 177 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 CEP89Q96ST8 783 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 PLVAPQ9BX97 442 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 GCOM2Q9BZD3 368 aaPredicted RBP20.09■□□□□ 0.81
PNN-202ENST00000553331 BMP2KQ9NSY1 1161 aaPredicted RBP20.09■□□□□ 0.81
PNN-202ENST00000553331 RGL1Q9NZL6 768 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 PLAGL2Q9UPG8 496 aa20.09■□□□□ 0.81
PNN-202ENST00000553331 SPTBN5Q9NRC6 3674 aaKnown RBP20.08■□□□□ 0.81
PNN-202ENST00000553331 A0A087WZ62 844 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 DKC1O60832 514 aaKnown RBP eCLIP20.08■□□□□ 0.81
PNN-202ENST00000553331 CYP4A11Q02928 519 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 EPHA7Q15375 998 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 CALCRLQ16602 461 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 KSR1Q8IVT5 923 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 ZNF710Q8N1W2 664 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 ZNF579Q8NAF0 562 aaKnown RBP20.08■□□□□ 0.81
PNN-202ENST00000553331 CEP170P1Q96L14 293 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 FDXACB1Q9BRP7 624 aaPredicted RBP20.08■□□□□ 0.81
PNN-202ENST00000553331 LXNQ9BS40 222 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 IGFLR1Q9H665 355 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 CYP26B1Q9NR63 512 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 WRAP73Q9P2S5 460 aaPredicted RBP20.08■□□□□ 0.81
PNN-202ENST00000553331 HCSTQ9UBK5 93 aa20.08■□□□□ 0.81
PNN-202ENST00000553331 CUL9Q8IWT3 2517 aa20.08■□□□□ 0.8
PNN-202ENST00000553331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.07■□□□□ 0.8
PNN-202ENST00000553331 H3BQ06 376 aaPredicted RBP20.07■□□□□ 0.8
PNN-202ENST00000553331 MAFO75444 373 aaPredicted RBP20.07■□□□□ 0.8
PNN-202ENST00000553331 ITGB1P05556 798 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 POLGP54098 1239 aaPredicted RBP20.07■□□□□ 0.8
PNN-202ENST00000553331 SAFBQ15424 915 aaKnown RBP eCLIP20.07■□□□□ 0.8
PNN-202ENST00000553331 FAM43BQ6ZT52 329 aaPredicted RBP20.07■□□□□ 0.8
PNN-202ENST00000553331 TPH2Q8IWU9 490 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 NLRP4Q96MN2 994 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 LMAN2LQ9H0V9 348 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 TMEM161AQ9NX61 479 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 CLDND1Q9NY35 253 aa20.07■□□□□ 0.8
PNN-202ENST00000553331 MYO7AQ13402 2215 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 IGKV6-21A0A0C4DH24 114 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 WNT7AO00755 349 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 YWHABP31946 246 aaKnown RBP20.06■□□□□ 0.8
PNN-202ENST00000553331 TXKP42681 527 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 FAM189BP81408 668 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 SPPL3Q8TCT6 385 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 P2RX5Q93086 422 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 TMEM143Q96AN5 459 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 JPH2Q9BR39 696 aaPredicted RBP20.06■□□□□ 0.8
PNN-202ENST00000553331 TYW1Q9NV66 732 aaKnown RBP20.06■□□□□ 0.8
PNN-202ENST00000553331 PCDHA12Q9UN75 941 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 PCDHB12Q9Y5F1 795 aa20.06■□□□□ 0.8
PNN-202ENST00000553331 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 ZBTB39O15060 712 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 NEMFO60524 1076 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 DNAJB1P25685 340 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 CDC42EP1Q00587 391 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 XKR9Q5GH70 373 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 ECHDC2Q86YB7 292 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 ABI1Q8IZP0 508 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 POF1BQ8WVV4 589 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 SLC7A3Q8WY07 619 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 ELAC1Q9H777 363 aaKnown RBP20.05■□□□□ 0.8
PNN-202ENST00000553331 ZSWIM4Q9H7M6 989 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 AAASQ9NRG9 546 aa20.05■□□□□ 0.8
PNN-202ENST00000553331 SRGAP2CP0DJJ0 459 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 SFPQP23246 707 aaKnown RBP eCLIP20.04■□□□□ 0.8
PNN-202ENST00000553331 MCM7P33993 719 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 GTF2F1P35269 517 aaKnown RBP eCLIP20.04■□□□□ 0.8
PNN-202ENST00000553331 SPIRE1Q08AE8 756 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 HYAL1Q12794 435 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 LEXMQ3ZCV2 418 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 NAALADL2Q58DX5 795 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 OTUD6AQ7L8S5 288 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 ZNF410Q86VK4 478 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 C4orf19Q8IY42 314 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 THNSL1Q8IYQ7 743 aa20.04■□□□□ 0.8
PNN-202ENST00000553331 FAM184AQ8NB25 1140 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms