RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 POTEDQ86YR6 584 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 ZNF579Q8NAF0 562 aaKnown RBP10.94□□□□□ -0.66
GCN1-208ENST00000551549 NSUN7Q8NE18 718 aaKnown RBP10.94□□□□□ -0.66
GCN1-208ENST00000551549 SPPL3Q8TCT6 385 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 NEK9Q8TD19 979 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 NLRP7Q8WX94 980 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 WASF1Q92558 559 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 TNFRSF25Q93038 417 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 PABPC5Q96DU9 382 aaKnown RBP10.94□□□□□ -0.66
GCN1-208ENST00000551549 FAM20AQ96MK3 541 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 LMAN2LQ9H0V9 348 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 ATP6V0A4Q9HBG4 840 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 WRAP73Q9P2S5 460 aaPredicted RBP10.94□□□□□ -0.66
GCN1-208ENST00000551549 WDFY4Q6ZS81 3184 aa10.94□□□□□ -0.66
GCN1-208ENST00000551549 MYH9P35579 1960 aaKnown RBP10.94□□□□□ -0.66
GCN1-208ENST00000551549 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 GCFC2P16383 781 aaKnown RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
GCN1-208ENST00000551549 IRS1P35568 1242 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 KRT2P35908 639 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 LTBRP36941 435 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 NPEPPSP55786 919 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 PSMC5P62195 406 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 ST3GAL1Q11201 340 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 NAALADL2Q58DX5 795 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 SPOUT1Q5T280 376 aaKnown RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 FAM43BQ6ZT52 329 aaPredicted RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 KSR1Q8IVT5 923 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 ZNF710Q8N1W2 664 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 P2RX5Q93086 422 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 SCLT1Q96NL6 688 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 IGFLR1Q9H665 355 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 CD320Q9NPF0 282 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 RNF19AQ9NV58 838 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 TYW1Q9NV66 732 aaKnown RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 TMEM161AQ9NX61 479 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 CLDND1Q9NY35 253 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 SUCLA2Q9P2R7 463 aaPredicted RBP10.93□□□□□ -0.66
GCN1-208ENST00000551549 PCDHGC5Q9Y5F6 944 aa10.93□□□□□ -0.66
GCN1-208ENST00000551549 LOXHD1Q8IVV2 1947 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 BTBD18B2RXH4 712 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 LINC01565O15544 149 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 NCK2O43639 380 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 MARCH6O60337 910 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 MAFO75444 373 aaPredicted RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 IL9P15248 144 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 ZSCAN20P17040 1043 aaPredicted RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 DNM2P50570 870 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 DLX2Q07687 328 aaPredicted RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 CLUL1Q15846 466 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 NCAPH2Q6IBW4 605 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 LRRC55Q6ZSA7 311 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 RNF169Q8NCN4 708 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 POF1BQ8WVV4 589 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 KHSRPQ92945 711 aaKnown RBP eCLIP10.92□□□□□ -0.66
GCN1-208ENST00000551549 CASD1Q96PB1 797 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 NAP1L4Q99733 375 aaKnown RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 CWH43Q9H720 699 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 ELAC1Q9H777 363 aaKnown RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 CYP26B1Q9NR63 512 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 RNF216Q9NWF9 866 aaPredicted RBP10.92□□□□□ -0.66
GCN1-208ENST00000551549 RGL1Q9NZL6 768 aa10.92□□□□□ -0.66
GCN1-208ENST00000551549 A0A087WZ62 844 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 WNT7AO00755 349 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 ZBTB39O15060 712 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 TBX3O15119 743 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 EIF5BO60841 1220 aaKnown RBP10.91□□□□□ -0.66
GCN1-208ENST00000551549 CENPBP07199 599 aaPredicted RBP10.91□□□□□ -0.66
GCN1-208ENST00000551549 P4HBP07237 508 aaKnown RBP10.91□□□□□ -0.66
GCN1-208ENST00000551549 SPIRE1Q08AE8 756 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 EPHA7Q15375 998 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 CLLU1OSQ5K130 101 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 ADGRD2Q7Z7M1 963 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 RHPN2Q8IUC4 686 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 FAM178BQ8IXR5 827 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 COLGALT1Q8NBJ5 622 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 DYDC2Q96IM9 177 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 CEP170P1Q96L14 293 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 FDXACB1Q9BRP7 624 aaPredicted RBP10.91□□□□□ -0.66
GCN1-208ENST00000551549 LXNQ9BS40 222 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 GCOM2Q9BZD3 368 aaPredicted RBP10.91□□□□□ -0.66
GCN1-208ENST00000551549 EPHX3Q9H6B9 360 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 BRMS1Q9HCU9 246 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 PCDHB12Q9Y5F1 795 aa10.91□□□□□ -0.66
GCN1-208ENST00000551549 RALGAPA2Q2PPJ7 1873 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 NLRC5Q86WI3 1866 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 A0A0U1RQF3 1178 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 TBX10O75333 385 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 FGF18O76093 207 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 BAG4O95429 457 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 ATF7P17544 494 aaPredicted RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 YWHABP31946 246 aaKnown RBP10.9□□□□□ -0.66
GCN1-208ENST00000551549 PBX3P40426 434 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 NRIP1P48552 1158 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 CDC42EP1Q00587 391 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 GUCY1B3Q02153 619 aa10.9□□□□□ -0.66
GCN1-208ENST00000551549 CYP4A11Q02928 519 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms