RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 EBAG9O00559 213 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 EYA4O95677 639 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 ORC2Q13416 577 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 PADI6Q6TGC4 694 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC35G2Q8TBE7 412 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 BICD1Q96G01 975 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 FAM20AQ96MK3 541 aa14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 FEZ2Q9UHY8 353 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-209ENST00000548825 LAMB2P55268 1798 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 EMSYQ7Z589 1322 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 DDX60LQ5H9U9 1706 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 E7EVH7 732 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 FOXN3O00409 490 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 KRT5P13647 590 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 FLT3P36888 993 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 ADCY1Q08828 1119 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 PPFIA1Q13136 1202 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 OTOP1Q7RTM1 612 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 AMFRQ9UKV5 643 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 CENPFP49454 3210 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 PDXKO00764 312 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 ECM2O94769 699 aaPredicted RBP14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 PLTPP55058 493 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 ERVK-9P63128 1117 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 MEI1Q5TIA1 1274 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 RNF10Q8N5U6 811 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 USP38Q8NB14 1042 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 FAM118BQ9BPY3 351 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 MYH7BA7E2Y1 1941 aa14.85□□□□□ -0.03
PRPF40B-209ENST00000548825 AHDC1Q5TGY3 1603 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 NAV1Q8NEY1 1877 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 PGRMC1O00264 195 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 TMOD1P28289 359 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 FMO5P49326 533 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 KRT71Q3SY84 523 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 XKR9Q5GH70 373 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 CPNE8Q86YQ8 564 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 SLC30A5Q8TAD4 765 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 ARHGEF26Q96DR7 871 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 PPP1R9AQ9ULJ8 1098 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 SNX24Q9Y343 169 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 GJA3Q9Y6H8 435 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 IGSF9BQ9UPX0 1349 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 PRELPP51888 382 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 SNX1Q13596 522 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 EDRF1Q3B7T1 1238 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 FRMD5Q7Z6J6 570 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 IQCDQ96DY2 449 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 CEP89Q96ST8 783 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 VAV3Q9UKW4 847 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 SUGT1Q9Y2Z0 365 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 EPHA7Q15375 998 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 TRIP13Q15645 432 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 RNPC3Q96LT9 517 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 INTS2Q9H0H0 1204 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 METTL14Q9HCE5 456 aaKnown RBP14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 AGPAT3Q9NRZ7 376 aa14.84□□□□□ -0.03
PRPF40B-209ENST00000548825 SPOPO43791 374 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 INPP5BP32019 993 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 TPCN2Q8NHX9 752 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 CHURC1Q8WUH1 139 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 PI4K2AQ9BTU6 479 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 IFI16Q16666 785 aaKnown RBP14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF668Q96K58 619 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 NACC1Q96RE7 527 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 SELENOSQ9BQE4 189 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 KCNH7Q9NS40 1196 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 TOPORSQ9NS56 1045 aaPredicted RBP14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 TSKSQ9UJT2 592 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 FBXL5Q9UKA1 691 aa14.83□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF233A6NK53 670 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 NF2P35240 595 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 KCNJ1P48048 391 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 NT5C2P49902 561 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 DAB2IPQ5VWQ8 1189 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 EMBQ6PCB8 327 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 AIPL1Q9NZN9 384 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 ZNF70Q9UC06 446 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 FTLP02792 175 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 TNIP1Q15025 636 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 PPP4R3CPQ6ZMV5 832 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 LNX1Q8TBB1 728 aaPredicted RBP14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 FAM212AQ96EL1 285 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 NEUROG2Q9H2A3 272 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 NOVA2Q9UNW9 492 aaKnown RBP14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 MRPL11Q9Y3B7 192 aaKnown RBP14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 PITPNM2Q9BZ72 1349 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 PJA2O43164 708 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 CYP26A1O43174 497 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 NR1D1P20393 614 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 MARCKSL1P49006 195 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 VIPAS39Q9H9C1 493 aa14.82□□□□□ -0.04
PRPF40B-209ENST00000548825 PEX10O60683 326 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 PPFIA4O75335 1185 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 KIAA0754O94854 1291 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 ITGB5P18084 799 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 SOX5P35711 763 aa14.81□□□□□ -0.04
PRPF40B-209ENST00000548825 STXBP4Q6ZWJ1 553 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms