RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GLYCTKQ8IVS8 523 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 AP1M1Q9BXS5 423 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 EDEM3Q9BZQ6 932 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 OSGEPQ9NPF4 335 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 MYCLP12524 364 aaPredicted RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 CCT5P48643 541 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 C8orf74Q6P047 294 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 GBP6Q6ZN66 633 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 ZNF720Q7Z2F6 126 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 CHURC1Q8WUH1 139 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 KIFC3Q9BVG8 833 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 CXorf56Q9H5V9 222 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 ACP6Q9NPH0 428 aa16.1■□□□□ 0.17
DDX55-209ENST00000542286 SEPT11Q9NVA2 429 aaKnown RBP16.1■□□□□ 0.17
DDX55-209ENST00000542286 DDX3XO00571 662 aaKnown RBP eCLIP16.09■□□□□ 0.174e-17■■■□□ 15.8
DDX55-209ENST00000542286 PAFAH1B1P43034 410 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 MNAT1P51948 309 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 GUCY2DQ02846 1103 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 PPP2R5CQ13362 524 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 RASA3Q14644 834 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 UGCGQ16739 394 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 MMGT1Q8N4V1 131 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 BORCS6Q96GS4 357 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 AGPAT3Q9NRZ7 376 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 TAS2R14Q9NYV8 317 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 NFU1Q9UMS0 254 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 SP4Q02446 784 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 SYCP3Q8IZU3 236 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 LNX1Q8TBB1 728 aaPredicted RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 AENQ8WTP8 325 aaKnown RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 SYN2Q92777 582 aaPredicted RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 MRPL11Q9Y3B7 192 aaKnown RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 IGSF9BQ9UPX0 1349 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 ARHGEF35A5YM69 484 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 GOLGA8IPA6NC78 632 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 GOLGA8JA6NMD2 632 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 EVI5O60447 810 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 ATP9AO75110 1047 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 MAPK7Q13164 816 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 BMT2Q1RMZ1 405 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 MEI1Q5TIA1 1274 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 PLA2G4FQ68DD2 849 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 FOXR2Q6PJQ5 311 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
DDX55-209ENST00000542286 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 EPB41L5Q9HCM4 733 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 OLFML3Q9NRN5 406 aa16.09■□□□□ 0.17
DDX55-209ENST00000542286 K7ENM7 598 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 HNRNPH1P31943 449 aaKnown RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 MRPS9P82933 396 aaKnown RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 ZNF772Q68DY9 489 aaPredicted RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 PADI6Q6TGC4 694 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 SAMD7Q7Z3H4 446 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 DDX42Q86XP3 938 aaKnown RBP eCLIP16.08■□□□□ 0.16
DDX55-209ENST00000542286 SUPT20HQ8NEM7 779 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 RPGRIP1Q96KN7 1286 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 CAMKK2Q96RR4 588 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 TEKT3Q9BXF9 490 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 STIM2Q9P246 746 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 FAM169AQ9Y6X4 670 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 MYH11P35749 1972 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 EBAG9O00559 213 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 EXOC3O60645 756 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 HEXIM1O94992 359 aaKnown RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 RPL13P26373 211 aaKnown RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 COPB2P35606 906 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 FMO5P49326 533 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 NPEPPSP55786 919 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 DRAP1Q14919 205 aaPredicted RBP16.08■□□□□ 0.16
DDX55-209ENST00000542286 NAA35Q5VZE5 725 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 FBXW10Q5XX13 1052 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 MIER3Q7Z3K6 550 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 KAT5Q92993 513 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 MXRA8Q9BRK3 442 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 TUFT1Q9NNX1 390 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 USP20Q9Y2K6 914 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 ZHX2Q9Y6X8 837 aa16.08■□□□□ 0.16
DDX55-209ENST00000542286 CEP104O60308 925 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 PSMC2P35998 433 aaKnown RBP16.07■□□□□ 0.16
DDX55-209ENST00000542286 MAP2K2P36507 400 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 CFAP221Q4G0U5 840 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
DDX55-209ENST00000542286 OLIG1Q8TAK6 271 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 NUCKS1Q9H1E3 243 aaKnown RBP16.07■□□□□ 0.16
DDX55-209ENST00000542286 PCDHGC5Q9Y5F6 944 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 PEX10O60683 326 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 SHOX2O60902 331 aaPredicted RBP16.07■□□□□ 0.16
DDX55-209ENST00000542286 ITGA4P13612 1032 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 JAM2P57087 298 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 MAP9Q49MG5 647 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 INPP4AQ96PE3 977 aaPredicted RBP16.07■□□□□ 0.16
DDX55-209ENST00000542286 NACC1Q96RE7 527 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms