RNA–Protein interactions for RNA: ENST00000539168.1

CDH5-202, Transcript of cadherin 5, humanhuman

TSL 2 BASIC

Gene CDH5, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-202ENST00000539168 MAEAQ7L5Y9 396 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 PLPPR4Q7Z2D5 763 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 C12orf56Q8IXR9 622 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 ZNF397Q8NF99 534 aaPredicted RBP22.33■■□□□ 1.16
CDH5-202ENST00000539168 IFT74Q96LB3 600 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 PCMTD1Q96MG8 357 aaPredicted RBP22.33■■□□□ 1.16
CDH5-202ENST00000539168 EDEM3Q9BZQ6 932 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 POLD4Q9HCU8 107 aa22.33■■□□□ 1.16
CDH5-202ENST00000539168 LUC7L2Q9Y383 392 aaKnown RBP22.33■■□□□ 1.16
CDH5-202ENST00000539168 ZNF236Q9UL36 1845 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 PLXNA1Q9UIW2 1896 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 ZMYM2Q9UBW7 1377 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 EMSYQ7Z589 1322 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 RBM47A0AV96 593 aaKnown RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 LGR5O75473 907 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 TXNP10599 105 aaKnown RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 TRIM21P19474 475 aaKnown RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 FECHP22830 423 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 PSMC2P35998 433 aaKnown RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 TCF7P36402 384 aaPredicted RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 ZC2HC1CQ53FD0 456 aaPredicted RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 HAUS6Q7Z4H7 955 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 FBXO16Q8IX29 292 aaPredicted RBP22.32■■□□□ 1.16
CDH5-202ENST00000539168 KCNN1Q92952 543 aa22.32■■□□□ 1.16
CDH5-202ENST00000539168 POLGP54098 1239 aaPredicted RBP22.31■■□□□ 1.16
CDH5-202ENST00000539168 PEX3P56589 373 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 SREBF2Q12772 1141 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 LAMC2Q13753 1193 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 PPP2R5AQ15172 486 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 TMTC1Q8IUR5 882 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 OR8K1Q8NGG5 319 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 CPLX3Q8WVH0 158 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 SLC7A3Q8WY07 619 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 BBXQ8WY36 941 aaPredicted RBP22.31■■□□□ 1.16
CDH5-202ENST00000539168 GPR20Q99678 358 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 AGPAT3Q9NRZ7 376 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 FRMD4BQ9Y2L6 1034 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 TLL2Q9Y6L7 1015 aa22.31■■□□□ 1.16
CDH5-202ENST00000539168 ADGRA2Q96PE1 1338 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 TMEM150BA6NC51 233 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 ZSCAN12O43309 604 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 GAS2O43903 313 aaKnown RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 OFD1O75665 1012 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 TUBB4AP04350 444 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 XRCC5P13010 732 aaKnown RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 KRT9P35527 623 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 TAF1CQ15572 869 aaPredicted RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 TMEM139Q8IV31 216 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 HHIPL1Q96JK4 782 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 KMT5AQ9NQR1 393 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 ABHD10Q9NUJ1 306 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 DMAC2Q9NW81 257 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 SORBS3O60504 671 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 ARIH2O95376 493 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 ATP4AP20648 1035 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 FXR1P51114 621 aaKnown RBP eCLIP22.3■■□□□ 1.16
CDH5-202ENST00000539168 MTERF2Q49AM1 385 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 CEP135Q66GS9 1140 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 CCAR2Q8N163 923 aaKnown RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 SPATA33Q96N06 139 aa22.3■■□□□ 1.16
CDH5-202ENST00000539168 JPH2Q9BR39 696 aaPredicted RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 DHX33Q9H6R0 707 aaKnown RBP22.3■■□□□ 1.16
CDH5-202ENST00000539168 GOLGA6L9A6NEM1 432 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 CCDC169A6NNP5 214 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 KIF2AO00139 706 aaPredicted RBP22.29■■□□□ 1.16
CDH5-202ENST00000539168 NPTX2P47972 431 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 ZBED6P86452 979 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 KCNA1Q09470 495 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 EMC2Q15006 297 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
CDH5-202ENST00000539168 EMID1Q96A84 441 aaPredicted RBP22.29■■□□□ 1.16
CDH5-202ENST00000539168 PCYT2Q99447 389 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 SH2D3AQ9BRG2 576 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 TTYH3Q9C0H2 523 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 SMARCAD1Q9H4L7 1026 aa22.29■■□□□ 1.16
CDH5-202ENST00000539168 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.29■■□□□ 1.16
CDH5-202ENST00000539168 TTC26A0AVF1 554 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 NKRFO15226 690 aaKnown RBP eCLIP22.28■■□□□ 1.16
CDH5-202ENST00000539168 MAPK13O15264 365 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 GH1P01241 217 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 HSP90AA2PQ14568 343 aaPredicted RBP22.28■■□□□ 1.16
CDH5-202ENST00000539168 DNTTIP2Q5QJE6 756 aaKnown RBP22.28■■□□□ 1.16
CDH5-202ENST00000539168 CYP26C1Q6V0L0 522 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 IFNL1Q8IU54 200 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 SMC1BQ8NDV3 1235 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 TMEM161BQ8NDZ6 487 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 GLG1Q92896 1179 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 MAML3Q96JK9 1138 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 DNAJC7Q99615 494 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 ABHD16BQ9H3Z7 469 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 GPRC5CQ9NQ84 441 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 ZNHIT6Q9NWK9 470 aaKnown RBP22.28■■□□□ 1.16
CDH5-202ENST00000539168 SIK3Q9Y2K2 1263 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 TELO2Q9Y4R8 837 aa22.28■■□□□ 1.16
CDH5-202ENST00000539168 IGF2BP3O00425 579 aaKnown RBP eCLIP22.27■■□□□ 1.16
CDH5-202ENST00000539168 CLIC2O15247 247 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 AKAP3O75969 853 aa22.27■■□□□ 1.16
CDH5-202ENST00000539168 AFPP02771 609 aaKnown RBP22.27■■□□□ 1.16
CDH5-202ENST00000539168 TARBP2Q15633 366 aaKnown RBP22.27■■□□□ 1.16
CDH5-202ENST00000539168 TAPT1Q6NXT6 567 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms