RNA–Protein interactions for RNA: ENST00000537848.5

MMP17-207, Transcript of matrix metallopeptidase 17, humanhuman

TSL 3

Gene MMP17, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP17-207ENST00000537848 FAM117BQ6P1L5 589 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 POTEGQ6S5H5 508 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 TMCO2Q7Z6W1 182 aaPredicted RBP18.64■□□□□ 0.57
MMP17-207ENST00000537848 ZNF410Q86VK4 478 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 SPRYD3Q8NCJ5 442 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 TOP1MTQ969P6 601 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 TMEM143Q96AN5 459 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 ZNF668Q96K58 619 aaPredicted RBP18.64■□□□□ 0.57
MMP17-207ENST00000537848 FAM161BQ96MY7 647 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 RAD9AQ99638 391 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 INO80BQ9C086 356 aaPredicted RBP18.64■□□□□ 0.57
MMP17-207ENST00000537848 ZNF576Q9H609 170 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 ATP6V0A4Q9HBG4 840 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 ERVK-5Q9HDB9 667 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 YBX2Q9Y2T7 364 aaKnown RBP18.64■□□□□ 0.57
MMP17-207ENST00000537848 COL4A3BPQ9Y5P4 624 aa18.64■□□□□ 0.57
MMP17-207ENST00000537848 SIP14410 1827 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 SZT2Q5T011 3432 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 A0A087WWV3 80 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 RBAK-RBAKDNI3L0D1 243 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 UPP2O95045 317 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 DARSP14868 501 aaKnown RBP18.63■□□□□ 0.57
MMP17-207ENST00000537848 MYOGP15173 224 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 PPP2R2DQ66LE6 453 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 FAM228AQ86W67 206 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 PRPF31Q8WWY3 499 aaKnown RBP18.63■□□□□ 0.57
MMP17-207ENST00000537848 NLRP4Q96MN2 994 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 TTYH1Q9H313 450 aaPredicted RBP18.63■□□□□ 0.57
MMP17-207ENST00000537848 MTMR10Q9NXD2 777 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 INSL6Q9Y581 213 aa18.63■□□□□ 0.57
MMP17-207ENST00000537848 A0A087WZ62 844 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 DENND3A2RUS2 1198 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 ARHGEF35A5YM69 484 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 CA3P07451 260 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 MXD4Q14582 209 aaPredicted RBP18.62■□□□□ 0.57
MMP17-207ENST00000537848 AK8Q96MA6 479 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 FDXACB1Q9BRP7 624 aaPredicted RBP18.62■□□□□ 0.57
MMP17-207ENST00000537848 TSPYL2Q9H2G4 693 aaPredicted RBP18.62■□□□□ 0.57
MMP17-207ENST00000537848 DDX19AQ9NUU7 478 aaKnown RBP18.62■□□□□ 0.57
MMP17-207ENST00000537848 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
MMP17-207ENST00000537848 DNM3Q9UQ16 869 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 MICAL3Q7RTP6 2002 aa18.62■□□□□ 0.57
MMP17-207ENST00000537848 PP2D1A8MPX8 630 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
MMP17-207ENST00000537848 SRGAP2CP0DJJ0 459 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
MMP17-207ENST00000537848 SFPQP23246 707 aaKnown RBP eCLIP18.61■□□□□ 0.57
MMP17-207ENST00000537848 CDC25AP30304 524 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 LAMTOR4Q0VGL1 99 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 BECN1Q14457 450 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 ZRSR1Q15695 479 aaKnown RBP18.61■□□□□ 0.57
MMP17-207ENST00000537848 KSR1Q8IVT5 923 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 MCPH1Q8NEM0 835 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 YME1L1Q96TA2 773 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 TMX1Q9H3N1 280 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 C1orf112Q9NSG2 853 aa18.61■□□□□ 0.57
MMP17-207ENST00000537848 STAG3L1P0CL83 205 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 TFDP1Q14186 410 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 ECM1Q16610 540 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 PADI6Q6TGC4 694 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 RTN4RL1Q86UN2 441 aaPredicted RBP18.6■□□□□ 0.57
MMP17-207ENST00000537848 KCTD17Q8N5Z5 321 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 CDK5RAP3Q96JB5 506 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 ADAM2Q99965 735 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 NT5C3AQ9H0P0 336 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 XPNPEP1Q9NQW7 623 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 CLIC4Q9Y696 253 aa18.6■□□□□ 0.57
MMP17-207ENST00000537848 LOXHD1Q8IVV2 1947 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 LONP1P36776 959 aaKnown RBP18.59■□□□□ 0.57
MMP17-207ENST00000537848 UBA7P41226 1012 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 HTRA4P83105 476 aaPredicted RBP18.59■□□□□ 0.57
MMP17-207ENST00000537848 CEBPZQ03701 1054 aaKnown RBP18.59■□□□□ 0.57
MMP17-207ENST00000537848 SLC24A5Q71RS6 500 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 MAEAQ7L5Y9 396 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 SRGAP1Q7Z6B7 1085 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 NPAS4Q8IUM7 802 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 RNF149Q8NC42 400 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 LINC01599Q8WXQ3 324 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 ZNF396Q96N95 335 aaPredicted RBP18.59■□□□□ 0.57
MMP17-207ENST00000537848 BHMT2Q9H2M3 363 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 RGS18Q9NS28 235 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 LRFN2Q9ULH4 789 aa18.59■□□□□ 0.57
MMP17-207ENST00000537848 SLC26A4O43511 780 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 MGEA5O60502 916 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 CSDE1O75534 798 aaKnown RBP18.58■□□□□ 0.56
MMP17-207ENST00000537848 EYA4O95677 639 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 ZSCAN22P10073 491 aaPredicted RBP18.58■□□□□ 0.56
MMP17-207ENST00000537848 CYP11B2P19099 503 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 IBSPP21815 317 aaPredicted RBP18.58■□□□□ 0.56
MMP17-207ENST00000537848 FGFR4P22455 802 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 ARL2P36404 184 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 PHKA2P46019 1235 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 SARSP49591 514 aaKnown RBP18.58■□□□□ 0.56
MMP17-207ENST00000537848 GRIN2CQ14957 1233 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 FAM102BQ5T8I3 360 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 CATSPER4Q7RTX7 472 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 CABP7Q86V35 215 aa18.58■□□□□ 0.56
MMP17-207ENST00000537848 CALML4Q96GE6 196 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms