RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 BRAPQ7Z569 592 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 FILIP1Q7Z7B0 1213 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 KIAA0907Q7Z7F0 614 aaPredicted RBP4.18□□□□□ -1.74
COPB1-205ENST00000526527 OSTM1Q86WC4 334 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 NIM1KQ8IY84 436 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 AHI1Q8N157 1196 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 PPM1KQ8N3J5 372 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 PCDH19Q8TAB3 1148 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 NINJ1Q92982 152 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 WNK4Q96J92 1243 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 SLC52A2Q9HAB3 445 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 SLC2A4RGQ9NR83 387 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 CATSPERZQ9NTU4 200 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 BTBD7Q9P203 1132 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 CEP72Q9P209 647 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 HECAQ9UBI9 543 aaPredicted RBP4.18□□□□□ -1.74
COPB1-205ENST00000526527 FBXO10Q9UK96 956 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 CBLCQ9ULV8 474 aa4.18□□□□□ -1.74
COPB1-205ENST00000526527 REXO2Q9Y3B8 237 aaKnown RBP4.18□□□□□ -1.74
COPB1-205ENST00000526527 A0A0U1RQG5 324 aaPredicted RBP4.17□□□□□ -1.74
COPB1-205ENST00000526527 TMEM191CA6NGB0 347 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 PRAMEF25A6NGN4 478 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 KCNK3O14649 394 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 WNT9AO14904 365 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 RAPGEF3O95398 923 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 MPIG6BO95866 241 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 C4BPAP04003 597 aaKnown RBP4.17□□□□□ -1.74
COPB1-205ENST00000526527 PYGMP11217 842 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CPEP16870 476 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 GJA4P35212 333 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 SOX5P35711 763 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 MRE11P49959 708 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 JAM2P57087 298 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CD83Q01151 205 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 PABPC4Q13310 644 aaKnown RBP eCLIP4.17□□□□□ -1.74
COPB1-205ENST00000526527 GRM7Q14831 915 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CRY1Q16526 586 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CT47A1Q5JQC4 288 aaPredicted RBP4.17□□□□□ -1.74
COPB1-205ENST00000526527 LRSAM1Q6UWE0 723 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 OTOP2Q7RTS6 562 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 GSTCDQ8NEC7 633 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 OR14K1Q8NGZ2 314 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 FBXW5Q969U6 566 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 AMNQ9BXJ7 453 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 OR10A2Q9H208 303 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 MSL2Q9HCI7 577 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CABP5Q9NP86 173 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 PCDHA8Q9Y5H6 950 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 CD2APQ9Y5K6 639 aa4.17□□□□□ -1.74
COPB1-205ENST00000526527 A0A0G2JNJ9 132 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 HMGB1P1B2RPK0 211 aaPredicted RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 HIP1RO75146 1068 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 CRTAMO95727 393 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 PEX11BO96011 259 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 ERBB2P04626 1255 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 C6orf222P0C671 652 aaPredicted RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 SRGAP2CP0DJJ0 459 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 ITGB6P18564 788 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 ECE1P42892 770 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 HGFACQ04756 655 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 SART3Q15020 963 aaKnown RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 ZKSCAN2Q63HK3 967 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 KANK2Q63ZY3 851 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 SGMS1Q86VZ5 419 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 FAM177A1Q8N128 213 aaPredicted RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 ZCRB1Q8TBF4 217 aaKnown RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 TMEM176AQ96HP8 235 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 BTBD2Q9BX70 525 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 NELFAQ9H3P2 528 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 AGO3Q9H9G7 860 aaKnown RBP4.16□□□□□ -1.74
COPB1-205ENST00000526527 SMURF1Q9HCE7 757 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 UCKL1Q9NWZ5 548 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 Q9UFV3 132 aa4.16□□□□□ -1.74
COPB1-205ENST00000526527 CAPN14A8MX76 684 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 ZNF561-AS1K7EIQ3 104 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 ARVCFO00192 962 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 IBSPP21815 317 aaPredicted RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 MEOX1P50221 254 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 STAT5BP51692 787 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 HERVK_113P62684 666 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 OCRLQ01968 901 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 SEC23AQ15436 765 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 SPTY2D1Q68D10 685 aaPredicted RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 TMEM200BQ69YZ2 307 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 C16orf59Q7L2K0 433 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 RPUSD2Q8IZ73 545 aaKnown RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 RTKN2Q8IZC4 609 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 D2HGDHQ8N465 521 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 NTN5Q8WTR8 489 aaPredicted RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 ZNF764Q96H86 408 aaPredicted RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 CELF4Q9BZC1 486 aaKnown RBP4.15□□□□□ -1.75
COPB1-205ENST00000526527 SPC25Q9HBM1 224 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 PARPBPQ9NWS1 579 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 PTGFRNQ9P2B2 879 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 GIT1Q9Y2X7 761 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 DCAF1Q9Y4B6 1507 aa4.15□□□□□ -1.75
COPB1-205ENST00000526527 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.14□□□□□ -1.75
COPB1-205ENST00000526527 CCDC66A2RUB6 948 aa4.14□□□□□ -1.75
COPB1-205ENST00000526527 MASP2O00187 686 aa4.14□□□□□ -1.75
COPB1-205ENST00000526527 SLC26A4O43511 780 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms