RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SCYL1	Q96KG9	808 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZDHHC15	Q96MV8	337 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CDC5L	Q99459	802 aa	Known RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	HNRNPAB	Q99729	332 aa	Known RBP	6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	RUSC1	Q9BVN2	902 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	LRRC3	Q9BY71	257 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	CAPN10	Q9HC96	672 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	PCDHB5	Q9Y5E4	795 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	PCDHGC5	Q9Y5F6	944 aa		6.21	□□□□□ -1.42
PABPC1-223	ENST00000523636	SPTAN1	Q13813	2472 aa	Known RBP	6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZFHX3	Q15911	3703 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	FAM221A	A4D161	298 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636		F6X3S4	739 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	TAF4	O00268	1085 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	MBTPS2	O43462	519 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZNF862	O60290	1169 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	ADAMTS4	O75173	837 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	WISP1	O95388	367 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	DLGAP3	O95886	979 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	PCCA	P05165	728 aa	Predicted RBP	6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	SLFN14	P0C7P3	912 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	FAM193A	P78312	1265 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	TCP10	Q12799	353 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	PAK2	Q13177	524 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	RRP1B	Q14684	758 aa	Known RBP	6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	LRSAM1	Q6UWE0	723 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	ACAD11	Q709F0	780 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	FAM126B	Q8IXS8	530 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	GOLM1	Q8NBJ4	401 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	GPBAR1	Q8TDU6	330 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	RTF1	Q92541	710 aa	Known RBP	6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	OSBPL2	Q9H1P3	480 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	SPC25	Q9HBM1	224 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	CYP4F12	Q9HCS2	524 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	INPP5F	Q9Y2H2	1132 aa		6.2	□□□□□ -1.42
PABPC1-223	ENST00000523636	RFX7	Q2KHR2	1363 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	MYADML2	A6NDP7	307 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	LOC730098	B7Z3J9	87 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636		F8W735	103 aa	Predicted RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	EPB41L2	O43491	1005 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	HTATSF1	O43719	755 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	CILP	O75339	1184 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	KRT38	O76015	456 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	SELP	P16109	830 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	CCL23	P55773	120 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	RPL6	Q02878	288 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	FAM160A1	Q05DH4	1040 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	SPP2	Q13103	211 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	SEPT6	Q14141	434 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	MPP2	Q14168	576 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	CBX2	Q14781	532 aa	Predicted RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	GRIK4	Q16099	956 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	KRT24	Q2M2I5	525 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636		Q6ZS46	218 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	SMG8	Q8ND04	991 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	GPRASP2	Q96D09	838 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	PABPC5	Q96DU9	382 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	EAF1	Q96JC9	268 aa	Predicted RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	WDR18	Q9BV38	432 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	MTIF3	Q9H2K0	278 aa	Known RBP	6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	PICK1	Q9NRD5	415 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	SWAP70	Q9UH65	585 aa		6.19	□□□□□ -1.42
PABPC1-223	ENST00000523636	CACNA1I	Q9P0X4	2223 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	CFAP69	A5D8W1	941 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	SLC15A5	A6NIM6	579 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	F13A1	P00488	732 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	CALR	P27797	417 aa	Known RBP	6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	HOXA7	P31268	230 aa	Predicted RBP	6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	ACLY	P53396	1101 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	RBL2	Q08999	1139 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	CLUL1	Q15846	466 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	SOWAHC	Q53LP3	525 aa	Predicted RBP	6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	OLFML2B	Q68BL8	750 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	ANKRD34A	Q69YU3	496 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZNF280D	Q6N043	979 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	SHISA2	Q6UWI4	295 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	BNC2	Q6ZN30	1099 aa	Predicted RBP	6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	TMCO2	Q7Z6W1	182 aa	Predicted RBP	6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	VPS37D	Q86XT2	251 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	SLITRK4	Q8IW52	837 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	KLHDC9	Q8NEP7	349 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	SCLY	Q96I15	445 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	RIPOR3	Q96MK2	946 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	AKTIP	Q9H8T0	292 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	XPNPEP3	Q9NQH7	507 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	STARD7	Q9NQZ5	370 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	RAD18	Q9NS91	495 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	PCDHA4	Q9UN74	947 aa		6.18	□□□□□ -1.42
PABPC1-223	ENST00000523636	STXBP3	O00186	592 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	COBL	O75128	1261 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	STK10	O94804	968 aa	Known RBP	6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	BPNT1	O95861	308 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	LMNA	P02545	664 aa	Known RBP	6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	TAL1	P17542	331 aa	Predicted RBP	6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	PTPN11	Q06124	597 aa	Predicted RBP	6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	RING1	Q06587	406 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	LMOD3	Q0VAK6	560 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	APOBR	Q0VD83	1088 aa		6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	ZC3H12A	Q5D1E8	599 aa	Known RBP	6.17	□□□□□ -1.42
PABPC1-223	ENST00000523636	TCEAL5	Q5H9L2	206 aa		6.17	□□□□□ -1.42

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