RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CHGBP05060 677 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 MC4RP32245 332 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 GJA4P35212 333 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 FNTBP49356 437 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 DDB1Q16531 1140 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 CATSPEREQ5SY80 951 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 Q6ZUG5 572 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 LIMS2Q7Z4I7 341 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 FUBP3Q96I24 572 aaKnown RBP eCLIP6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 SMAD5Q99717 465 aaKnown RBP6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 BARX1Q9HBU1 254 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 TOPORSQ9NS56 1045 aaPredicted RBP6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 BTBD7Q9P203 1132 aa6.3□□□□□ -1.4
HMGB1P1-201ENST00000522557 H0Y858 1186 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 H7C1D1 291 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 K7ESM1 405 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PRPF3O43395 683 aaKnown RBP6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA12O60330 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 SLC9A1P19634 815 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 GPR3P46089 330 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 KRTAP10-2P60368 255 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 SART3Q15020 963 aaKnown RBP6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PDCD1Q15116 288 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZBTB46Q86UZ6 589 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 SLC39A13Q96H72 371 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 AHCYL2Q96HN2 611 aaKnown RBP6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PTPN18Q99952 460 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 SSBP3Q9BWW4 388 aaPredicted RBP6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZDHHC5Q9C0B5 715 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 KCNH7Q9NS40 1196 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 C14orf119Q9NWQ9 140 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 TCEAL9Q9UHQ7 104 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 ADAM29Q9UKF5 820 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA9Q9Y5G4 932 aaKnown RBP6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA8Q9Y5G5 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA7Q9Y5G6 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA6Q9Y5G7 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA3Q9Y5H0 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 PCDHGA2Q9Y5H1 932 aa6.29□□□□□ -1.4
HMGB1P1-201ENST00000522557 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 MMEP08473 750 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PTGS1P23219 599 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PTX3P26022 381 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 AOAHP28039 575 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 HERVK_113P62684 666 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PPP2CBP62714 309 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PPP2CAP67775 309 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 EFEMP1Q12805 493 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 EPHA7Q15375 998 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 GPR155Q7Z3F1 870 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 C11orf74Q86VG3 221 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 CMIPQ8IY22 773 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 MAGEB6Q8N7X4 407 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 FOXRED1Q96CU9 486 aaPredicted RBP6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 AJUBAQ96IF1 538 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 ACSS2Q9NR19 701 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 UCKL1Q9NWZ5 548 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 GALNT8Q9NY28 637 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PPP4R1LQ9P1A2 415 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 PTPN22Q9Y2R2 807 aa6.28□□□□□ -1.4
HMGB1P1-201ENST00000522557 LAMTOR5O43504 91 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 MPIG6BO95866 241 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 LSP1P33241 339 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 GNALP38405 381 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 KIF11P52732 1056 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 LRSAM1Q6UWE0 723 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 HDGFL2Q7Z4V5 671 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 RTN4RL1Q86UN2 441 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 CMTR2Q8IYT2 770 aaKnown RBP6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 AMNQ9BXJ7 453 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 KRTAP9-3Q9BYQ3 159 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 INCENPQ9NQS7 918 aa6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 ZNF277Q9NRM2 450 aaPredicted RBP6.27□□□□□ -1.41
HMGB1P1-201ENST00000522557 KIF3BO15066 747 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CYP17A1P05093 508 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CSF2RBP32927 897 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 IL13RA1P78552 427 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 ODF1Q14990 250 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 TMEM132BQ14DG7 1078 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 PCBP2Q15366 365 aaKnown RBP eCLIP6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 SURF1Q15526 300 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CCSAPQ6IQ19 270 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 GLB1LQ6UWU2 654 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 DPP8Q6V1X1 898 aaPredicted RBP6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 ARHGEF18Q6ZSZ5 1173 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 PLEKHH3Q7Z736 793 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CHPFQ8IZ52 775 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CPA6Q8N4T0 437 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 TTC8Q8TAM2 541 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 ASB15Q8WXK1 588 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 FAXDC2Q96IV6 333 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 GBP4Q96PP9 640 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 KATNBL1Q9H079 304 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 USP36Q9P275 1121 aaKnown RBP6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 GABBR1Q9UBS5 961 aa6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 CNOT11Q9UKZ1 510 aaKnown RBP6.26□□□□□ -1.41
HMGB1P1-201ENST00000522557 PRAMEF22A3QJZ6 481 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms