RNA–Protein interactions for RNA: ENST00000514755.5

UBE2D3-232, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-232ENST00000514755 S1PR4O95977 384 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 MYOGP15173 224 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 SFNP31947 248 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 MCM2P49736 904 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 DEFB103AP81534 67 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 PRKCEQ02156 737 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 SPIRE1Q08AE8 756 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 PPP2R5CQ13362 524 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 SAFBQ15424 915 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 PTPRNQ16849 979 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 FAM26DQ5JW98 314 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 CNKSR3Q6P9H4 555 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 RPAINQ86UA6 219 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 DEFB123Q8N688 67 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 TSC1Q92574 1164 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 FAM20AQ96MK3 541 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 WRAP73Q9P2S5 460 aaPredicted RBP12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 CDY2AQ9Y6F7 541 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 SLC4A7Q9Y6M7 1214 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 CDH23Q9H251 3354 aa12.4□□□□□ -0.42
UBE2D3-232ENST00000514755 EVPLQ92817 2033 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 TBX3O15119 743 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 CAND2O75155 1236 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 PARNO95453 639 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 C22orf31O95567 290 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 ACTN1P12814 892 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 MCM7P33993 719 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 WDR5P61964 334 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 ZNF174Q15697 407 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 PLEKHG4Q58EX7 1191 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 ZNF484Q5JVG2 852 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.39□□□□□ -0.434e-6■■■□□ 19.2
UBE2D3-232ENST00000514755 RDM1Q8NG50 284 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 MTMR9Q96QG7 549 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 PPP1R16BQ96T49 567 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 NAP1L4Q99733 375 aaKnown RBP12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 COL1A2P08123 1366 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 LOXHD1Q8IVV2 1947 aa12.39□□□□□ -0.43
UBE2D3-232ENST00000514755 SMIM35A0A1B0GVV1 85 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 NEMFO60524 1076 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 GHRP10912 638 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 ATP2A2P16615 1042 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 TOB1P50616 345 aaPredicted RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 CLCN3P51790 818 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 MRPS6P82932 125 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 CUL4AQ13619 759 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 LPIN1Q14693 890 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 CALCRLQ16602 461 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 NCAPH2Q6IBW4 605 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 NOSTRINQ8IVI9 506 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 KIAA0319LQ8IZA0 1049 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 TNPO1Q92973 898 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 GUCD1Q96NT3 240 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 CEP89Q96ST8 783 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 MTIF3Q9H2K0 278 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 NKX2-4Q9H2Z4 354 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 MTMR10Q9NXD2 777 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 RGL1Q9NZL6 768 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 MICAL3Q7RTP6 2002 aa12.38□□□□□ -0.43
UBE2D3-232ENST00000514755 MARCH6O60337 910 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 BAIAP3O94812 1187 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 ARHGEF15O94989 841 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.433e-9■■■□□ 15
UBE2D3-232ENST00000514755 TXKP42681 527 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 DRP2Q13474 957 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 CTTNQ14247 550 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 TARBP2Q15633 366 aaKnown RBP12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 MTERF2Q49AM1 385 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 FBXO47Q5MNV8 452 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 ZNF697Q5TEC3 545 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 PLA2G4FQ68DD2 849 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 ANO5Q75V66 913 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 RSPH3Q86UC2 560 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 LRRC71Q8N4P6 559 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 LINC01465Q8N7H1 131 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 TMEM40Q8WWA1 233 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 TIFAQ96CG3 184 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 DYDC2Q96IM9 177 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 FAM167AQ96KS9 214 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 SLC9A7Q96T83 725 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 SEMA6BQ9H3T3 888 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 TTC12Q9H892 705 aaPredicted RBP12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 SMC3Q9UQE7 1217 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 TRPV2Q9Y5S1 764 aa12.37□□□□□ -0.43
UBE2D3-232ENST00000514755 ABHD14A-ACY1A0A1B0GW23 586 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 ZBTB39O15060 712 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 VTNP04004 478 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 CD52P31358 61 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 PSMC5P62195 406 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 CYP4A11Q02928 519 aa12.36□□□□□ -0.43
UBE2D3-232ENST00000514755 GNL2Q13823 731 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms