RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RFC5P40937 340 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 RPL21P46778 160 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SNAP25P60880 206 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 TMEM266Q2M3C6 531 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PARP10Q53GL7 1025 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 JAMLQ86YT9 394 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 HOMEZQ8IX15 550 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 GUF1Q8N442 669 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 C3orf20Q8ND61 904 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 C1orf54Q8WWF1 131 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 ALG3Q92685 438 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 NSUN4Q96CB9 384 aaKnown RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 L3MBTL3Q96JM7 780 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 EBF2Q9HAK2 575 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 BARHL2Q9NY43 387 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 SLC5A4Q9NY91 659 aa8.24□□□□□ -1.09
NEDD9-208ENST00000504387 USP15Q9Y4E8 981 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-208ENST00000504387 hCG_2014768A0A024R1R8 64 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 POTEFA5A3E0 1075 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 C5orf60A6NFR6 353 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 CCDC169A6NNP5 214 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RSPH10B2B2RC85 870 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ERVV-1B6SEH8 477 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 DDX3XO00571 662 aaKnown RBP eCLIP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 CAMTA2O94983 1202 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RSPH10BP0C881 870 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 POTEIP0CG38 1075 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ATP4AP20648 1035 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 STX2P32856 288 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RANBP1P43487 201 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 COPS2P61201 443 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 DCAF12L1Q5VU92 463 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 TMEM154Q6P9G4 183 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 POTEEQ6S8J3 1075 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 IRF2BP2Q7Z5L9 587 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ATP8B4Q8TF62 1192 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 UCMAQ8WVF2 138 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 NAF1Q96HR8 494 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 PBKQ96KB5 322 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RPS6KC1Q96S38 1066 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 THAP2Q9H0W7 228 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 C6orf50Q9HD87 102 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ALG13Q9NP73 1137 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 USP40Q9NVE5 1235 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 GCNT4Q9P109 453 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 SLC12A4Q9UP95 1085 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 MYH1P12882 1939 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 BCL9LQ86UU0 1499 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 USP17L5A8MUK1 530 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 FLOT1O75955 427 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 SUN1O94901 812 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 NTSR2O95665 410 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 DNAJC3Q13217 504 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RBBP5Q15291 538 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 GRIK5Q16478 980 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 KYNUQ16719 465 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 KIAA1755Q5JYT7 1200 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 DAB2IPQ5VWQ8 1189 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 CYP4F22Q6NT55 531 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 NT5DC3Q86UY8 548 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 EXOC3L1Q86VI1 746 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 SUPT20HQ8NEM7 779 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 RAD54LQ92698 747 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ERP27Q96DN0 273 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ZNF512BQ96KM6 892 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 TGS1Q96RS0 853 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 CRAMP1Q96RY5 1269 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 EYA3Q99504 573 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 SH3GL3Q99963 347 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ERP44Q9BS26 406 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 NSRP1Q9H0G5 558 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 EPB41L4BQ9H329 900 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 PABPC3Q9H361 631 aaKnown RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 SLCO1B3Q9NPD5 702 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 CTTNBP2NLQ9P2B4 639 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 ARMCX3Q9UH62 379 aaPredicted RBP8.23□□□□□ -1.09
NEDD9-208ENST00000504387 TMEM59LQ9UK28 342 aa8.23□□□□□ -1.09
NEDD9-208ENST00000504387 GSTTP1A0A1W2PQM5 241 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CETN3O15182 167 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 TOM1O60784 492 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CALCAP01258 141 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PYGLP06737 847 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 TRIM49P0CI25 452 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 TRIM49CP0CI26 452 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 BRAFP15056 766 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 SLC8A3P57103 927 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PSMC6P62333 389 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 MPP2Q14168 576 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CNGA2Q16280 664 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 C2CD6Q53TS8 623 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 LRRC57Q8N9N7 239 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 ATG4AQ8WYN0 398 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 NUDCD1Q96RS6 583 aa8.22□□□□□ -1.09
NEDD9-208ENST00000504387 CNOT10Q9H9A5 744 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 PAPOLBQ9NRJ5 636 aaKnown RBP8.22□□□□□ -1.09
NEDD9-208ENST00000504387 FAM114A2Q9NRY5 505 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms